You are here

Home

ATCC10864_009787-T1, ATCC10864_009787-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009787-T1
Unique NameATCC10864_009787-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000219:65895..67123-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009787-T1 ID=ATCC10864_009787-T1|Name=ATCC10864_009787-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1229bp|location=Sequence derived from alignment at MCQH01000219:65895..67123- (Aspergillus niger ATCC 10864)
ATGTCACACGGAGGGCTTTCTAGATCCTCTATGTTCTCTCAGATTGTGAC
AGCAGCAAAGGGGTTATTTTCTCGACAGGACTCCGACGAATCTTCCCTCA
AAAATCTGCGCCCTACAGCTACTATCACCACCTCCGGCGCCCCATCTGGA
ATCAAAAGCAGCCCCAACATACCCAAAATGGTCACAGCAACAAGACAGCG
GAAATTCCCCGCTGAGCAACAACAATCCTCGACAGAGCCCGAAGTCAATG
GATCGAATGGAAAGCGCAAGTCCGAACCCGTGGGCGCTGAACCCACTGAG
ACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCAGTCTAGAGGCGACGAC
ACAAGAATCGGAGAGCAAACCTTCGAGTAACAAGAAGTCGAAGAAGATGA
CGGAACCGACTGAGGAGCCTGAGGAACAGCAAGAGGAGGAAAAGAAACCT
TCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCTTTGATAGCGAGGAGCC
GGAAATCCCGGAGGTTGCGGCTGTTGAGGATACTGCGGAAGCGCAACAGG
ATCAGGATGATGAGAGCAGTGATGATGATGAGGCCCCAGAGACGGTCGAC
AACTCTGCACAGCTGTCGAAGATGAGGATGGAAGCTAAGAAGCAGGAACG
GGCTAGGCAAATGTGAGTGATGCGCGCGATTTCAGCCTTGGTGCTGTTTC
TGGATACGATTCTAACGTTTTCTACAGAGAGGAGCAATTGAAGCGGGACA
AACGGAAACAGTTGGATGAGTTGCGCAAATCCCAGGCGAAGTTGGCGAAG
AAAAAGGAAGCAAAGGCCGAAGATCTGTTGTCGGAAAGCACAGAGACCCT
CCAAGGAACTACTACGCAAGATGCACGACGCTCGGCCCTCCCTGCTCTTC
TTCCCGATGATATCCTCAATGCGGCCCCCGATGTCCGGCCCCCGACACCT
CCCGCGGAAGAGATGACTATCATGCAGAAGAAGCCCAACAAGCTACGATT
CTTGGACAAGAAGGAGAAGCCGCCGAAGGATGCGCGGGTGGGAGATGTTA
CTATCCGGGTGTTGGATGATGGTGTATCCAAAAAGCCCTCAAAGACGGTT
CTGCCGCCTAAGGCCTCAAAAACCGGGCGCAATGCCAAGCAGAATTGGCT
GAACAAATCCCGCAACACAGGCGCTTTGAATGGGTTGAGAAGGACGACTG
GCGGTTCCTCGGGATTCGTGCGCAAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000219:65895..67123-

>ATCC10864_009787-T1 ID=ATCC10864_009787-T1|Name=ATCC10864_009787-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2328bp|location=Sequence derived from alignment at MCQH01000219:65895..67123- (Aspergillus niger ATCC 10864)
AGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCA
AATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTG
TTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACG
ACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCC
CCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGATGACTATCATGCAG
AAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAA
GGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTAT
CCAAAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGG
CGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTT
GAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAAT
AGATGTCACACGGAGGGCTTTCTAGATCCTCTATGTTCTCTCAGATTGTG
ACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTCCGACGAATCTTCCCT
CAAAAATCTGCGCCCTACAGCTACTATCACCACCTCCGGCGCCCCATCTG
GAATCAAAAGCAGCCCCAACATACCCAAAATGGTCACAGCAACAAGACAG
CGGAAATTCCCCGCTGAGCAACAACAATCCTCGACAGAGCCCGAAGTCAA
TGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGGCGCTGAACCCACTG
AGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCAGTCTAGAGGCGACG
ACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAGAAGTCGAAGAAGAT
GACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGAGGAGGAAAAGAAAC
CTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCTTTGATAGCGAGGAG
CCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACTGCGGAAGCGCAACA
GGATCAGGATGATGAGAGCAGTGATGATGATGAGGCCCCAGAGACGGTCG
ACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAGCTAAGAAGCAGGAA
CGGGCTAGGCAAATAGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTT
GGATGAGTTGCGCAAATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAA
AGGCCGAAGATCTGTTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACT
ACGCAAGATGCACGACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATAT
CCTCAATGCGGCCCCCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGA
TGACTATCATGCAGAAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAG
GAGAAGCCGCCGAAGGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTT
GGATGATGGTGTATCCAAAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGG
CCTCAAAAACCGGGCGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGC
AACACAGGCGCTTTGAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGG
ATTCGTGCGCAAATAGATGTCACACGGAGGGCTTTCTAGATCCTCTATGT
TCTCTCAGATTGTGACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTCC
GACGAATCTTCCCTCAAAAATCTGCGCCCTACAGCTACTATCACCACCTC
CGGCGCCCCATCTGGAATCAAAAGCAGCCCCAACATACCCAAAATGGTCA
CAGCAACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAATCCTCGACA
GAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGG
CGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCA
GTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAG
AAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGA
GGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCT
TTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACT
GCGGAAGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGATGAGGC
CCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAG
CTAAGAAGCAGGAACGGGCTAGGCAAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009787ATCC10864_009787Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009787-T1ATCC10864_009787-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009787-T1.cdsATCC10864_009787-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009787-T1.exon2ATCC10864_009787-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009787-T1.exon1ATCC10864_009787-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08297
InterProIPR013268
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000219supercontigMCQH01000219:65895..67123 -
Powered by Drupal