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ATCC10864_009837-T1, ATCC10864_009837-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009837-T1
Unique NameATCC10864_009837-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000222:97169..100077-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009837-T1 ID=ATCC10864_009837-T1|Name=ATCC10864_009837-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2909bp|location=Sequence derived from alignment at MCQH01000222:97169..100077- (Aspergillus niger ATCC 10864)
ATGTCATCTCGACCAGATCTCAAGGTAAGCTCTACCTGTTTTAGGAACTT
AAGAAGAGAAAAATCGGCTAACATTAAACTAATTACACTGTCTAGGTGGA
CGACGAAGTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTCCTCTG
ACAATGACAACAACAACAATGAGACCATTCGAGTTTTCGACCGCGGAGAC
TGGTACTCCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACCGTCTA
CAAAACCACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGGCGGCC
TGCCCTCCGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTACGCGAG
GCGCTATTCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCGAGCGG
GCGCGGCGGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAACTTGC
AGGATGTGGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTGAGGCT
GGAGCGCCGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGGGAGGC
GAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTTGGGTG
TGAGTGAATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGCTGGTC
ATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGGAGGAA
GGATGTGGAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGGGATTG
CCGTGTCGGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCGAGCAG
GACTTGACGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTGCCTCA
GACTGAGTTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAAGTATC
TGGGTGTTATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCTATCAG
CATGATCTGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGGGCGTT
GAATCTCATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTTGTTTG
GGTTGCTGAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGGCGCAG
TGGTTGAAGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGACAGCA
GCTGGTGGAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTATGCAGG
AGGAGCATTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGCGGTTT
CAGAGGAAGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAGGTTGC
CATTCGCCTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGATGAAC
AGTATCAGACGCCTCTGGAAGCAGAGTATACGTCCAAGCTGCGCAGCCAT
TCCGATAACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTGGACTT
GGATGCATTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGATGAGA
GCTTGCGCATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACATGGAC
TCGGAACACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGACAAGAA
GCTGTTCCTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATTGACTC
GCAACGAGGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGTGCTCA
ACTCAGAAGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCGCTCCG
TCGCGAGCACGACCAGCTGTCATCTAACTACAATCGCACTCAGACTGGTT
TGGTTAGCGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCCTTGAG
CAGCTTGCTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTCGCGCA
TTGTGCCGTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCACCCGC
GTGGTACTGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTATGGAA
ATGCAGGATGACATCTCTTTTATCACCAACGACGTGTCGCTCATCCGTGA
TGAGTCTTCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAAATCGA
CCTACATCCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTGGATGC
TTCGTGCCATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATTCTTGC
TCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTTCATGG
CTGAGATGCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGGAGTCA
TTGATCATCATCGATGAACTTGGTCGCGGAACAAGTACATACGATGGATT
CGGCCTTGCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCGCTGTT
TCGGCCTGTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCGATCGG
TACCCGAAGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGTGATGG
CACGGGCAATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGTTACGT
TGCTGTACCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTATTCAC
GTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCGCGACA
AAAGGCAGATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGAAAAAG
AGTCCATGTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGGGCAGT
GCTCTCCTCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAGGCACC
TGGCAAGGACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGATCTTG
TCAACAGTGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCATCAAA
GCTTTGTAG
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Coding sequence (CDS) from alignment at MCQH01000222:97169..100077-

>ATCC10864_009837-T1 ID=ATCC10864_009837-T1|Name=ATCC10864_009837-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5676bp|location=Sequence derived from alignment at MCQH01000222:97169..100077- (Aspergillus niger ATCC 10864)
GTGGACGACGAAGTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTC
CTCTGACAATGACAACAACAACAATGAGACCATTCGAGTTTTCGACCGCG
GAGACTGGTACTCCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACC
GTCTACAAAACCACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGG
CGGCCTGCCCTCCGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTAC
GCGAGGCGCTATTCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCG
AGCGGGCGCGGCGGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAA
CTTGCAGGATGTGGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTG
AGGCTGGAGCGCCGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGG
GAGGCGAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTT
GGGTGTGAGTGAATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGC
TGGTCATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGG
AGGAAGGATGTGGAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGG
GATTGCCGTGTCGGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCG
AGCAGGACTTGACGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTG
CCTCAGACTGAGTTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAA
GTATCTGGGTGTTATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCT
ATCAGCATGATCTGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGG
GCGTTGAATCTCATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTT
GTTTGGGTTGCTGAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGG
CGCAGTGGTTGAAGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGA
CAGCAGCTGGTGGAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTAT
GCAGGAGGAGCATTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGC
GGTTTCAGAGGAAGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAG
GTTGCCATTCGCCTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGA
TGAACAGTATCAGACGCCTCTGGAAGCAGAGTATACGTCCAAGCTGCGCA
GCCATTCCGATAACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTG
GACTTGGATGCATTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGA
TGAGAGCTTGCGCATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACA
TGGACTCGGAACACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGAC
AAGAAGCTGTTCCTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATT
GACTCGCAACGAGGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGT
GCTCAACTCAGAAGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCG
CTCCGTCGCGAGCACGACCAGCTGTCATCTAACTACAATCGCACTCAGAC
TGGTTTGGTTAGCGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCC
TTGAGCAGCTTGCTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTC
GCGCATTGTGCCGTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCA
CCCGCGTGGTACTGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTA
TGGAAATGCAGGATGACATCTCTTTTATCACCAACGACGTGTCGCTCATC
CGTGATGAGTCTTCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAA
ATCGACCTACATCCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTG
GATGCTTCGTGCCATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATT
CTTGCTCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTT
CATGGCTGAGATGCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGG
AGTCATTGATCATCATCGATGAACTTGGTCGCGGAACAAGTACATACGAT
GGATTCGGCCTTGCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCG
CTGTTTCGGCCTGTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCG
ATCGGTACCCGAAGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGT
GATGGCACGGGCAATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGT
TACGTTGCTGTACCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTA
TTCACGTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCG
CGACAAAAGGCAGATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGA
AAAAGAGTCCATGTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGG
GCAGTGCTCTCCTCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAG
GCACCTGGCAAGGACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGA
TCTTGTCAACAGTGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCA
TCAAAGCTTTGTAGATGTCATCTCGACCAGATCTCAAGGTGGACGACGAA
GTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTCCTCTGACAATGA
CAACAACAACAATGAGACCATTCGAGTTTTCGACCGCGGAGACTGGTACT
CCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACCGTCTACAAAACC
ACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGGCGGCCTGCCCTC
CGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTACGCGAGGCGCTAT
TCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCGAGCGGGCGCGGC
GGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAACTTGCAGGATGT
GGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTGAGGCTGGAGCGC
CGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGGGAGGCGAGAAGT
GTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTTGGGTGTGAGTGA
ATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGCTGGTCATTCAGC
TGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGGAGGAAGGATGTG
GAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGGGATTGCCGTGTC
GGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCGAGCAGGACTTGA
CGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTGCCTCAGACTGAG
TTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAAGTATCTGGGTGT
TATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCTATCAGCATGATC
TGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGGGCGTTGAATCTC
ATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTTGTTTGGGTTGCT
GAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGGCGCAGTGGTTGA
AGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGACAGCAGCTGGTG
GAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTATGCAGGAGGAGCA
TTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGCGGTTTCAGAGGA
AGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAGGTTGCCATTCGC
CTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGATGAACAGTATCA
GACGCCTCTGGAAGCAGAGTATACGTCCAAGCTGCGCAGCCATTCCGATA
ACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTGGACTTGGATGCA
TTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGATGAGAGCTTGCG
CATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACATGGACTCGGAAC
ACCGTCGTGTGGGCCGGGATCTGGACCAAGAAGTTGACAAGAAGCTGTTC
CTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATTGACTCGCAACGA
GGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGTGCTCAACTCAGA
AGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCGCTCCGTCGCGAG
CACGACCAGCTGTCATCTAACTACAATCGCACTCAGACTGGTTTGGTTAG
CGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCCTTGAGCAGCTTG
CTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTCGCGCATTGTGCC
GTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCACCCGCGTGGTAC
TGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTATGGAAATGCAGG
ATGACATCTCTTTTATCACCAACGACGTGTCGCTCATCCGTGATGAGTCT
TCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAAATCGACCTACAT
CCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTGGATGCTTCGTGC
CATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATTCTTGCTCGTGTT
GGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTTCATGGCTGAGAT
GCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGGAGTCATTGATCA
TCATCGATGAACTTGGTCGCGGAACAAGTACATACGATGGATTCGGCCTT
GCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCGCTGTTTCGGCCT
GTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCGATCGGTACCCGA
AGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGTGATGGCACGGGC
AATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGTTACGTTGCTGTA
CCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTATTCACGTTGCTG
AATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCGCGACAAAAGGCA
GATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGAAAAAGAGTCCAT
GTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGGGCAGTGCTCTCC
TCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAGGCACCTGGCAAG
GACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGATCTTGTCAACAG
TGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCATCAAAGCTTTGT
AGATGTCATCTCGACCAGATCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032300mismatch repair complex
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MSH2ATCC10864_009837Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009837-T1ATCC10864_009837-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009837-T1.cdsATCC10864_009837-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009837-T1.exon2ATCC10864_009837-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009837-T1.exon1ATCC10864_009837-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007861
InterProIPR007696
InterProIPR027417
InterProIPR032642
InterProIPR000432
InterProIPR036678
PFAMPF01624
PFAMPF00488
InterProIPR016151
PFAMPF05188
PFAMPF05192
PFAMPF05190
InterProIPR036187
InterProIPR007860
InterProIPR011184
InterProIPR007695
Properties
Property NameValue
NoteBUSCO:EOG09260EPQ
ProductMutS-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000222supercontigMCQH01000222:97169..100077 -
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