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ATCC10864_009875-T1, ATCC10864_009875-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009875-T1
Unique NameATCC10864_009875-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000222:223867..225368-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009875-T1 ID=ATCC10864_009875-T1|Name=ATCC10864_009875-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1502bp|location=Sequence derived from alignment at MCQH01000222:223867..225368- (Aspergillus niger ATCC 10864)
ATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAAAAAGGC
CATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGCTGTATT
ACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAGAACCCC
AAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGATCGTGC
GGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAAAGCCGA
GTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAGGGAGGG
TATGTACATGTCTCCCGGCATCCGATCACTTTTGGCCCAGAGAGCATTGT
ATGCTAACACTCCTTGGTGAATTAGAAACCAGGACGAAGATGGCGAGGAC
GCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGA
TAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGG
AGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTCTTT
ACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGG
TACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCA
CATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAG
AGTGAAAGGTATGGATCAATCGGTGATCTTATGTTGCCACATGTCGGTTC
CCAGAGCTAACATGCCTCTACAGGCTTGTGAAGCAGCTCTTCAACATGGC
GCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCTCTTT
GCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAAGACG
GAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCGTTCT
GATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATTCGTC
GTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGCACGA
ATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGACGCA
AGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGTAGCG
ATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAAGATC
CAAACAGCAACGCACTACAAGAAGGTAAGCCCTCCAGTCATGCATATTCC
TAGGGAAGACAACACTAACCACAAATCCAGGTCATCCTCGACGGTGCCGA
AAAGCTAACCCCCTGCTCACCGGGCGACCAAGGCGCAATGGAAATGTCAT
GGACCACCGTAGAAGCCGACCAACTCCTGGAACCCCCGCTCGTCCTGAAA
GACTTCATCAAGGCGGTTCGTAACTCCCGACCAACCGTCAGTCAAGAAGA
CCTGCAACGAAACTCCGAATGGACCAAGGAATTCGGCAGCGAGGGTGCTT
AA
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Coding sequence (CDS) from alignment at MCQH01000222:223867..225368-

>ATCC10864_009875-T1 ID=ATCC10864_009875-T1|Name=ATCC10864_009875-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5220bp|location=Sequence derived from alignment at MCQH01000222:223867..225368- (Aspergillus niger ATCC 10864)
GTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACCA
AGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACTCCTGG
AACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCGA
CCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGGA
ATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTTCAACATGGCG
CGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCTCTTTG
CGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAAGACGG
AATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCGTTCTG
ATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATTCGTCG
TCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGCACGAA
TGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGACGCAA
GCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGTAGCGA
TATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAAGATCC
AAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATGGCGAGGACGC
CGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGATA
AACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGGAG
GCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTCTTTAC
GGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGGTA
CGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCACA
TTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAGAG
TGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAA
AAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGC
TGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAG
AACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGA
TCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAA
AGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAG
GGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGC
GACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACT
CCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACT
CCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACC
AAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTTCAACA
TGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCT
CTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAA
GACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCG
TTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATT
CGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGC
ACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGA
CGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGT
AGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAA
GATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATGGCGAG
GACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTC
GGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAA
AGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTC
TTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCC
GGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACA
GCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGT
GAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACC
GTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTA
TCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGG
AGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTAC
ATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCG
AAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTG
GGAAGGGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCAC
CGGGCGACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGAC
CAACTCCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCG
TAACTCCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAAT
GGACCAAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAGCTCTT
CAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCG
ACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGT
ATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAA
GGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAG
CCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATC
AACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGA
GTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACT
CCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATC
CGCAAGATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGAAGATG
GCGAGGACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATC
TTGTCGGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAG
CGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCAC
ACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGG
CCCCCGGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGC
GAACAGCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGA
TGGGTGAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGCGATTG
ACACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAG
GCTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAA
ATGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCG
AGTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGAT
AATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGG
AAGTGGGAAGGGAGGGTCATCCTCGACGGTGCCGAAAAGCTAACCCCCTG
CTCACCGGGCGACCAAGGCGCAATGGAAATGTCATGGACCACCGTAGAAG
CCGACCAACTCCTGGAACCCCCGCTCGTCCTGAAAGACTTCATCAAGGCG
GTTCGTAACTCCCGACCAACCGTCAGTCAAGAAGACCTGCAACGAAACTC
CGAATGGACCAAGGAATTCGGCAGCGAGGGTGCTTAAGCTTGTGAAGCAG
CTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGA
AGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTC
GTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGAC
TCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGA
TGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCG
ATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCC
TGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGG
CTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGC
CAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGAAACCAGGACGA
AGATGGCGAGGACGCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGG
CGATCTTGTCGGATAAACCCAATGTGCAGTGGGAGGATGTTGCCGGTCTG
GAGAGCGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTT
CCCACACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGT
ATGGGCCCCCGGGTACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACG
GAGGCGAACAGCACATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAA
GTGGATGGGTGAGAGTGAAAGATGAGTAATACCGACTTCCTAGGGAGGGC
GATTGACACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACG
AGAAGGCTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCA
CTGAAATGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGC
CGGCGAGTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTC
TAGATAATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCG
CAAGGAAGTGGGAAGGGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VPS4ATCC10864_009875Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009875-T1ATCC10864_009875-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009875-T1.cdsATCC10864_009875-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009875-T1.exon4ATCC10864_009875-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009875-T1.exon3ATCC10864_009875-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009875-T1.exon2ATCC10864_009875-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009875-T1.exon1ATCC10864_009875-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09336
PFAMPF00004
InterProIPR027417
InterProIPR003959
InterProIPR003960
InterProIPR007330
PFAMPF04212
InterProIPR003593
InterProIPR036181
InterProIPR015415
Properties
Property NameValue
ProductVacuolar protein sorting-associated protein 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000222supercontigMCQH01000222:223867..225368 -
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