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ATCC10864_009949-T1, ATCC10864_009949-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009949-T1
Unique NameATCC10864_009949-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:39734..41029+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009949-T1 ID=ATCC10864_009949-T1|Name=ATCC10864_009949-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1296bp|location=Sequence derived from alignment at MCQH01000231:39734..41029+ (Aspergillus niger ATCC 10864)
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTAAGTTACTGCGCCTCCACGCGCGATTCTTCACATCTC
ACAATGAACAGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTC
GACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGGTGAGTATACCGTCCT
TTAAGGTACGGATGTGGACACTGATGGGAACCAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGTAAGATTTATTCCATCAAGGTTGTAGTTCGGTGCG
ATCACATACTAAGCGGCGTATAGGAGTCCGCATCAAGACCATCTACGGCG
ACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGAT
ATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAA
ATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGC
AGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCA
GACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAA
GACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Coding sequence (CDS) from alignment at MCQH01000231:39734..41029+

>ATCC10864_009949-T1 ID=ATCC10864_009949-T1|Name=ATCC10864_009949-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4548bp|location=Sequence derived from alignment at MCQH01000231:39734..41029+ (Aspergillus niger ATCC 10864)
ATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTC
GACATTGGTGATAGCACGTACATTACCATCACGGGTGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAA
GAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGGCGACACTGGAT
CGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCGATATCACCGAC
TATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGCAAATCCCCGAC
CGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTG
TGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGTTGC
ACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTC
CGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTA
GCTCGGTGATCGTCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCACGT
CATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTC
TTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGATGGCGCC
TATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAACGG
CGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCA
CGATCAGCGGGATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATT
GACGGGTCGACGTATCTTACCATGGAGGACATCACCATTGACAACACGGA
TGGCGATGATGGCGAGGCGGCCAACACCGATGGGTTCGACATTGGTGATA
GCACGTACATTACCATCACGGGTGCCAATGTATACAACCAAGATGACTGT
GTGGCGGTGAACTCGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTC
TGGTGGCCACGGGCTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAACA
CCGTGAAGAACGTGACCTTCTACGACTCGGAGATCAAGAGCTCTCAGAAC
GGAGTCCGCATCAAGACCATCTACGGCGACACTGGATCGGTCAGTGAGGT
CACCTACAAGGAGATTACCCTGTCCGATATCACCGACTATGGCATTGTGG
TGGAGCAAAACTATGACGATACGAGCAAATCCCCGACCGATGGAATCACC
ATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGG
CACCAACATCTACATCGTCTGCGGATCAGACAGTTGCACGGACTGGACTT
GGACGGATGTGGATGTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAAT
GTGCCGGACGATATCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGT
CCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGC
TGGTGACCCCCGCCCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCC
TGCACGTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGAC
CTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCA
CGTTGGATCTGACCGATCTGAACGACGGGACTCACGTCATCTTCGAAGGC
GAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTC
CGGAACTGACATCACCGTCACCGGGGCCGATGGCGCCTATCTCAACGGTG
ACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAACGGCGGCAAGACGAAG
CCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGGAT
CTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGT
ATCTTACCATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGC
GAGGCGGCCAACACCGATGGGTTCGACATTGGTGATAGCACGTACATTAC
CATCACGGGTGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACT
CGGGCGAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGG
CTGTCGATCGGTTCCGTCGGCGGTCGGAGTGACAACACCGTGAAGAACGT
GACCTTCTACGACTCGGAGATCAAGAGCTCTCAGAACGGAGTCCGCATCA
AGACCATCTACGGCGACACTGGATCGGTCAGTGAGGTCACCTACAAGGAG
ATTACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAAAACTA
TGACGATACGAGCAAATCCCCGACCGATGGAATCACCATCGAAGACTTTG
TCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTAC
ATCGTCTGCGGATCAGACAGTTGCACGGACTGGACTTGGACGGATGTGGA
TGTGAGTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATA
TCAGCTGTTAGATGGTGACTTCTAGCTCGGTGATCGTCCTAACGCTCTGG
GCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGC
CCCTAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACGTTCTCCG
GCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACC
ATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGAC
CGATCTGAACGACGGGACTCACGTCATCTTCGAAGGCGAAACCACCTTCG
GTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATC
ACCGTCACCGGGGCCGATGGCGCCTATCTCAACGGTGACGGCAGTCGTTG
GTGGGATGGCGAGGGCAGCAACGGCGGCAAGACGAAGCCCAAGTTCTTCT
ACGCCCATGATCTGACCTCGTCCACGATCAGCGGGATCTACATCCAGAAC
TCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACCATGGA
GGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACA
CCGATGGGTTCGACATTGGTGATAGCACGTACATTACCATCACGGGTGCC
AATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGAACAT
TTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTT
CCGTCGGCGGTCGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGAC
TCGGAGATCAAGAGCTCTCAGAACGGAGTCCGCATCAAGACCATCTACGG
CGACACTGGATCGGTCAGTGAGGTCACCTACAAGGAGATTACCCTGTCCG
ATATCACCGACTATGGCATTGTGGTGGAGCAAAACTATGACGATACGAGC
AAATCCCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGT
GCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGAT
CAGACAGTTGCACGGACTGGACTTGGACGGATGTGGATGTGAGTGGAGGG
AAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009949ATCC10864_009949Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009949-T1.exon1ATCC10864_009949-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009949-T1.exon2ATCC10864_009949-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009949-T1.exon3ATCC10864_009949-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009949-T1.exon4ATCC10864_009949-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009949-T1.cdsATCC10864_009949-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009949-T1ATCC10864_009949-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:39734..41029 +
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