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ATCC10864_009952-T1, ATCC10864_009952-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009952-T1
Unique NameATCC10864_009952-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:46237..47686-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009952-T1 ID=ATCC10864_009952-T1|Name=ATCC10864_009952-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1450bp|location=Sequence derived from alignment at MCQH01000231:46237..47686- (Aspergillus niger ATCC 10864)
ATGCCCTCAGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGC
TTCGGCCGTACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCC
CTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGAC
GAATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATAC
CTACCGAATTAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCG
AGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAAC
AACTCCTACCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCAC
GGGTCATGACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATG
GGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTC
GGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCG
TAACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCT
CTTCGCATATCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGAC
TCCTCGGTGAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGA
CACGTACCGATCCGACCATATTACGGTTACCAACTGGGTGTACCAAGGCG
GAGACGATGCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGA
GAATGTCACGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGAC
AATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTT
CGAGTAAATAAGGCTCAGAGGCATGATGACATTTGAATTCACAGGTATAG
GTGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAG
CTGGTAGGTACCATGTCCTTCACAGCGATCCCTGGCTGACCAGCTAGGAT
CGGGGTCAATTATGGTGTTCCTCCGAATGGTGGGGGGGGCGGCCATGGAT
ACGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTA
CCTGTGTATATTGACACCTGGTGAGGGCGATACCACCATGTTTGAGGTAC
TCGGCTAACCCGGGCAGCTTGAGCTATCTCTTCAGCGAGAACATCACGCA
GTATTGTGACACATCGACGTACGAATTCGAGGACCTCCACTTCAGAAACA
TCAGCGGCAATGGACTCGCAACGGTGACTGATTACCCGGGGAAGAATATC
AGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTGTACGGACTT
GACCTTCCAGGACATCAGTATTACGCTTCCAGGGAACTATACTGGCAAAC
ATGTACTGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGCAATTCGTGA
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Coding sequence (CDS) from alignment at MCQH01000231:46237..47686-

>ATCC10864_009952-T1 ID=ATCC10864_009952-T1|Name=ATCC10864_009952-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6210bp|location=Sequence derived from alignment at MCQH01000231:46237..47686- (Aspergillus niger ATCC 10864)
CTTGAGCTATCTCTTCAGCGAGAACATCACGCAGTATTGTGACACATCGA
CGTACGAATTCGAGGACCTCCACTTCAGAAACATCAGCGGCAATGGACTC
GCAACGGTGACTGATTACCCGGGGAAGAATATCAGCTTCGCCGTGGCTTT
GCTTTGTTCTGAGAAGGCACCGTGTACGGACTTGACCTTCCAGGACATCA
GTATTACGCTTCCAGGGAACTATACTGGCAAACATGTACTGTGCGAGAAT
GCTGAGGTGGAGGGGCTCCCATGCAATTCGTGAGATCGGGGTCAATTATG
GTGTTCCTCCGAATGGTGGGGGGGGCGGCCATGGATACGTGCGCAACGTC
TCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTACCTGTGTATATTGA
CACCTGGTGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTT
CAAGAGCTGGCGGAGACGATGCAGTGGCTTTTCAAAGGGAACTCGACGAA
CATACATGTAGAGAATGTCACGGTTTACGGCGGACCGGGCATCGCTTTTG
GGTCGCTGGGACAATACCCCGACCGGACGGATATTGTGGAGAATGTGACG
GTTCGGAATGTTCGAATGCCCTCAGCCATCAGTATTGGAGTGATCGCGGG
CCTGAGTGTCGCTGCTTCGGCCGTACCTTCTCTCCAGAAGAATGGCACTA
CCTGCACCGTCATCCCTTTAGGAAACGGACAGGATGATGTCCCCAACATC
CTCTCGGCCGTTGACGAATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCT
CCCAGCGCCGTATACCTACCGAATTAACCAACGGATGACGACTCACCTGA
CCGATTCCCGACTCGAGATCGGTGGTACGCTTCTCTTCAGCGACGATATC
GACTACTGGGTCAACAACTCCTACCGGGTGGACTTTCAGAACCAGTCAAG
TGCCTGGCGTATCACGGGTCATGACTATGTTGTGGATGGAGGTCCACGTC
AAGGTGGAGTGGATGGGAATGGACAGCTGTGGTACACTTGGGCCAAGGGA
GGAAGCAATGTCTTCGGACGACCGATGCCAGTGCATGTGTTCGAGTCGAC
GCGAGCAACCCTGCGTAACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTG
TTCTTGTCGATTCCTCTTCGCATATCAACCTCGATAATTTTTACGTGAAT
GCCACAAACCATGACTCCTCGGTGAGCCCAGAGGGCGAGTGGCTTGAGCT
ATCTCTTCAGCGAGAACATCACGCAGTATTGTGACACATCGACGTACGAA
TTCGAGGACCTCCACTTCAGAAACATCAGCGGCAATGGACTCGCAACGGT
GACTGATTACCCGGGGAAGAATATCAGCTTCGCCGTGGCTTTGCTTTGTT
CTGAGAAGGCACCGTGTACGGACTTGACCTTCCAGGACATCAGTATTACG
CTTCCAGGGAACTATACTGGCAAACATGTACTGTGCGAGAATGCTGAGGT
GGAGGGGCTCCCATGCAATTCGTGAGATCGGGGTCAATTATGGTGTTCCT
CCGAATGGTGGGGGGGGCGGCCATGGATACGTGCGCAACGTCTCAGTCGA
AAACCTTCGACTCAAGGATGTGCAGTTACCTGTGTATATTGACACCTGGT
GCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAGCT
GGCGGAGACGATGCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATG
TAGAGAATGTCACGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTG
GGACAATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAA
TGTTCGAATGCCCTCAGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTG
TCGCTGCTTCGGCCGTACCTTCTCTCCAGAAGAATGGCACTACCTGCACC
GTCATCCCTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGC
CGTTGACGAATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGC
CGTATACCTACCGAATTAACCAACGGATGACGACTCACCTGACCGATTCC
CGACTCGAGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTG
GGTCAACAACTCCTACCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGC
GTATCACGGGTCATGACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGA
GTGGATGGGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAA
TGTCTTCGGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAA
CCCTGCGTAACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTC
GATTCCTCTTCGCATATCAACCTCGATAATTTTTACGTGAATGCCACAAA
CCATGACTCCTCGGTGAGCCCAGAGGGCGAGTGGCTTGAGCTATCTCTTC
AGCGAGAACATCACGCAGTATTGTGACACATCGACGTACGAATTCGAGGA
CCTCCACTTCAGAAACATCAGCGGCAATGGACTCGCAACGGTGACTGATT
ACCCGGGGAAGAATATCAGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAG
GCACCGTGTACGGACTTGACCTTCCAGGACATCAGTATTACGCTTCCAGG
GAACTATACTGGCAAACATGTACTGTGCGAGAATGCTGAGGTGGAGGGGC
TCCCATGCAATTCGTGAGATCGGGGTCAATTATGGTGTTCCTCCGAATGG
TGGGGGGGGCGGCCATGGATACGTGCGCAACGTCTCAGTCGAAAACCTTC
GACTCAAGGATGTGCAGTTACCTGTGTATATTGACACCTGGTGCAACCGT
CCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAGCTGGCGGAGA
CGATGCAGTGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGAGAAT
GTCACGGTTTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGACAATA
CCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTTCGAA
TGCCCTCAGCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGCT
TCGGCCGTACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCCC
TTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGACG
AATGTGGCCAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATACC
TACCGAATTAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCGA
GATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAACA
ACTCCTACCGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCACG
GGTCATGACTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATGG
GAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTCG
GACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCGT
AACCTGGCAATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCTC
TTCGCATATCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGACT
CCTCGGTGAGCCCAGAGGGCGAGTGGCTTGAGCTATCTCTTCAGCGAGAA
CATCACGCAGTATTGTGACACATCGACGTACGAATTCGAGGACCTCCACT
TCAGAAACATCAGCGGCAATGGACTCGCAACGGTGACTGATTACCCGGGG
AAGAATATCAGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTG
TACGGACTTGACCTTCCAGGACATCAGTATTACGCTTCCAGGGAACTATA
CTGGCAAACATGTACTGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGC
AATTCGTGAGATCGGGGTCAATTATGGTGTTCCTCCGAATGGTGGGGGGG
GCGGCCATGGATACGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAG
GATGTGCAGTTACCTGTGTATATTGACACCTGGTGCAACCGTCCTTCCAA
CGGGCGATGAATTCCGGGGTTTACTTCAAGAGCTGGCGGAGACGATGCAG
TGGCTTTTCAAAGGGAACTCGACGAACATACATGTAGAGAATGTCACGGT
TTACGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGACAATACCCCGACC
GGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTTCGAATGCCCTCA
GCCATCAGTATTGGAGTGATCGCGGGCCTGAGTGTCGCTGCTTCGGCCGT
ACCTTCTCTCCAGAAGAATGGCACTACCTGCACCGTCATCCCTTTAGGAA
ACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGACGAATGTGGC
CAGACCTCTGGAGGGAGAGTTGTTCTCCCAGCGCCGTATACCTACCGAAT
TAACCAACGGATGACGACTCACCTGACCGATTCCCGACTCGAGATCGGTG
GTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAACAACTCCTAC
CGGGTGGACTTTCAGAACCAGTCAAGTGCCTGGCGTATCACGGGTCATGA
CTATGTTGTGGATGGAGGTCCACGTCAAGGTGGAGTGGATGGGAATGGAC
AGCTGTGGTACACTTGGGCCAAGGGAGGAAGCAATGTCTTCGGACGACCG
ATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCGTAACCTGGC
AATCCGGCAGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCTCTTCGCATA
TCAACCTCGATAATTTTTACGTGAATGCCACAAACCATGACTCCTCGGTG
AGCCCAGAGGGCGAGTGGCTTGAGCTATCTCTTCAGCGAGAACATCACGC
AGTATTGTGACACATCGACGTACGAATTCGAGGACCTCCACTTCAGAAAC
ATCAGCGGCAATGGACTCGCAACGGTGACTGATTACCCGGGGAAGAATAT
CAGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTGTACGGACT
TGACCTTCCAGGACATCAGTATTACGCTTCCAGGGAACTATACTGGCAAA
CATGTACTGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGCAATTCGTG
AGATCGGGGTCAATTATGGTGTTCCTCCGAATGGTGGGGGGGGCGGCCAT
GGATACGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATGTGCA
GTTACCTGTGTATATTGACACCTGGTGCAACCGTCCTTCCAACGGGCGAT
GAATTCCGGGGTTTACTTCAAGAGCTGGCGGAGACGATGCAGTGGCTTTT
CAAAGGGAACTCGACGAACATACATGTAGAGAATGTCACGGTTTACGGCG
GACCGGGCATCGCTTTTGGGTCGCTGGGACAATACCCCGACCGGACGGAT
ATTGTGGAGAATGTGACGGTTCGGAATGTTCGAATGCCCTCAGCCATCAG
TATTGGAGTGATCGCGGGCCTGAGTGTCGCTGCTTCGGCCGTACCTTCTC
TCCAGAAGAATGGCACTACCTGCACCGTCATCCCTTTAGGAAACGGACAG
GATGATGTCCCCAACATCCTCTCGGCCGTTGACGAATGTGGCCAGACCTC
TGGAGGGAGAGTTGTTCTCCCAGCGCCGTATACCTACCGAATTAACCAAC
GGATGACGACTCACCTGACCGATTCCCGACTCGAGATCGGTGGTACGCTT
CTCTTCAGCGACGATATCGACTACTGGGTCAACAACTCCTACCGGGTGGA
CTTTCAGAACCAGTCAAGTGCCTGGCGTATCACGGGTCATGACTATGTTG
TGGATGGAGGTCCACGTCAAGGTGGAGTGGATGGGAATGGACAGCTGTGG
TACACTTGGGCCAAGGGAGGAAGCAATGTCTTCGGACGACCGATGCCAGT
GCATGTGTTCGAGTCGACGCGAGCAACCCTGCGTAACCTGGCAATCCGGC
AGCCTCAGTTTTGGGCTGTTCTTGTCGATTCCTCTTCGCATATCAACCTC
GATAATTTTTACGTGAATGCCACAAACCATGACTCCTCGGTGAGCCCAGA
GGGCGAGTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009952ATCC10864_009952Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009952-T1ATCC10864_009952-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009952-T1.cdsATCC10864_009952-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009952-T1.exon5ATCC10864_009952-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_009952-T1.exon4ATCC10864_009952-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009952-T1.exon3ATCC10864_009952-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009952-T1.exon2ATCC10864_009952-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009952-T1.exon1ATCC10864_009952-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:46237..47686 -
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