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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:55840..56594- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009956-T1 ID=ATCC10864_009956-T1|Name=ATCC10864_009956-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=755bp|location=Sequence derived from alignment at MCQH01000231:55840..56594- (Aspergillus niger ATCC 10864)
ATGGTCGCCTACTCGTCTCTTCTCCTCGCTCTTTCGGCTGCCTCGAGCGC
CGTCGCTCTCCCCAATGGCAAGGCCCTGCTGGACATGGCCAAGCGCAGTC
TTACTTCTTCCGCGGAAGGCGAGAGCAACGGCTACTTCTACTCCTTCTGG
ACCAACGGTGAGGGCGACGTGACCTACACCAACGGCGACGCTGGTGAATA
CACCGTCGAGTGGACCGACTGTGGTGACTTTGTGGCCGGCAAGGGTTGGA
ACCCGGGCAGTGCTCAGTAAGGACTTTTCCATCGCTGTTCATCGAATGAA
AATGGGTGTTAACCAGTATATTCAGGGCCGTTACCTACAGCGGATCATGG
GAAACCGACGCCAACGCCTACCTGTCCGTCTACGGTTGGACCACCTCCCC
CTTGGTCGAATTCTATATCGTCGACAAGTACGGTGACTACGACCCCTCCT
CTGGCCTGACCGAGCTCGGCACCGTCGACAGCGACGACGGAACCTACAAG
ATCTACCAGACCACCCGTGAGGACGCCGACTCGATCGAAGGCACTGCCAC
CTTCAAGCAGTACTGGTCCGTGCGCACTGAGGGCCGTATTGGTGGAACCG
TCACCACGCAGAACCACTTCGATGCCTGGGAGAACCTTGGTCTGGAGCTG
GGTACCTTCAACTACATGATCGTTGCCACCGAGGGATACGAGAGCAGCGG
GTCTGCCACCATCACCGTTGAGACTTCTTCTGACAGCACCGAGGAGAGCT
GCTAA back to topCoding sequence (CDS) from alignment at MCQH01000231:55840..56594- >ATCC10864_009956-T1 ID=ATCC10864_009956-T1|Name=ATCC10864_009956-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1392bp|location=Sequence derived from alignment at MCQH01000231:55840..56594- (Aspergillus niger ATCC 10864)
GGCCGTTACCTACAGCGGATCATGGGAAACCGACGCCAACGCCTACCTGT
CCGTCTACGGTTGGACCACCTCCCCCTTGGTCGAATTCTATATCGTCGAC
AAGTACGGTGACTACGACCCCTCCTCTGGCCTGACCGAGCTCGGCACCGT
CGACAGCGACGACGGAACCTACAAGATCTACCAGACCACCCGTGAGGACG
CCGACTCGATCGAAGGCACTGCCACCTTCAAGCAGTACTGGTCCGTGCGC
ACTGAGGGCCGTATTGGTGGAACCGTCACCACGCAGAACCACTTCGATGC
CTGGGAGAACCTTGGTCTGGAGCTGGGTACCTTCAACTACATGATCGTTG
CCACCGAGGGATACGAGAGCAGCGGGTCTGCCACCATCACCGTTGAGACT
TCTTCTGACAGCACCGAGGAGAGCTGCTAAATGGTCGCCTACTCGTCTCT
TCTCCTCGCTCTTTCGGCTGCCTCGAGCGCCGTCGCTCTCCCCAATGGCA
AGGCCCTGCTGGACATGGCCAAGCGCAGTCTTACTTCTTCCGCGGAAGGC
GAGAGCAACGGCTACTTCTACTCCTTCTGGACCAACGGTGAGGGCGACGT
GACCTACACCAACGGCGACGCTGGTGAATACACCGTCGAGTGGACCGACT
GTGGTGACTTTGTGGCCGGCAAGGGTTGGAACCCGGGCAGTGCTCAGGCC
GTTACCTACAGCGGATCATGGGAAACCGACGCCAACGCCTACCTGTCCGT
CTACGGTTGGACCACCTCCCCCTTGGTCGAATTCTATATCGTCGACAAGT
ACGGTGACTACGACCCCTCCTCTGGCCTGACCGAGCTCGGCACCGTCGAC
AGCGACGACGGAACCTACAAGATCTACCAGACCACCCGTGAGGACGCCGA
CTCGATCGAAGGCACTGCCACCTTCAAGCAGTACTGGTCCGTGCGCACTG
AGGGCCGTATTGGTGGAACCGTCACCACGCAGAACCACTTCGATGCCTGG
GAGAACCTTGGTCTGGAGCTGGGTACCTTCAACTACATGATCGTTGCCAC
CGAGGGATACGAGAGCAGCGGGTCTGCCACCATCACCGTTGAGACTTCTT
CTGACAGCACCGAGGAGAGCTGCTAAATGGTCGCCTACTCGTCTCTTCTC
CTCGCTCTTTCGGCTGCCTCGAGCGCCGTCGCTCTCCCCAATGGCAAGGC
CCTGCTGGACATGGCCAAGCGCAGTCTTACTTCTTCCGCGGAAGGCGAGA
GCAACGGCTACTTCTACTCCTTCTGGACCAACGGTGAGGGCGACGTGACC
TACACCAACGGCGACGCTGGTGAATACACCGTCGAGTGGACCGACTGTGG
TGACTTTGTGGCCGGCAAGGGTTGGAACCCGGGCAGTGCTCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR013319 |
| PFAM | PF00457 |
| InterPro | IPR013320 |
| InterPro | IPR033123 |
| InterPro | IPR018208 |
| InterPro | IPR001137 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH11 |
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:55840..56594 - |
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