You are here

Home

ATCC10864_009964-T1, ATCC10864_009964-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009964-T1
Unique NameATCC10864_009964-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:77606..79180-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009964-T1 ID=ATCC10864_009964-T1|Name=ATCC10864_009964-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1575bp|location=Sequence derived from alignment at MCQH01000231:77606..79180- (Aspergillus niger ATCC 10864)
ATGACTACCAACGGCATTCAACCCGGCCACGTCGGCAATCTGACTCAGGA
TCAAGAGGCCAAATTACAACAGCTCTGGTCCATTGTCCTTACTCTGCTGG
ACGTGAAGTCCCTACAAAGTGGAGATGCCTCGGCACAGACCCAGCCCGAT
CAGCGTCCAAGCACGTCGCTCTCCCGAGCCGACACCGTCGTTTCCGCTCA
TGGCCAGACGGCTTTCACAGAAGACTTGTCCCGAGTCCTCCGGGAGAATG
GTATGAGCAACCCTGACATTAAGTCCGTCCGGGAGGCCCTGAGTGACACC
TCGATCGACGACCTTCGCTCGGGTCTGTTGTACACTGCCAAACATGACTC
CCCTGACGTCCTCCTACTTCGCTTCTTACGCGCTCGCAAGTGGGACGTCA
GCAAGGCCTTCGGGATGATGTTGAAGGCGCTCGTCTGGCGCAAGGATCAG
CACGTCGACGACAAGGTGATTGCGAACCCTGAACTTGCCGCATTAGTCAC
GTCGCAGAACACGGTGGACACGCACGCGGCCAAGGAGTGCAAGGACTTCT
TGGACCAAATGCGTATGGGGAAATGTTATATGCACGGAACCGACCGCGAT
GGCCGACCTGTTCTTGTGGTGCGCGTTCGCTTCCATCAACCCTCAAAACA
GAGCGAGGCAGTGATCAATCGATTCATCCTTCATACGATCGAGACAGTCC
GGTTATTGCTGGCGCCTCCCCAGGAGACAGTGGTACGTCTATCCATCTTT
TGTTTCCATGGGCTCCCACGGGTTGTATCCCGCTAATGATCCATGTGGCA
GACCATCATCTTCGACATGACTGGCTTTGGCCTCTCGAACATGGTAAGTT
GCTCTGCAAATCAGGGATATACGCACGGGGAACTGACCATGACCAGGAAT
ATGCACCGGTGAAATTCATCATCGAGTGTTTCCAGGAGAACTACCCTGAG
TCGCTGGGATACATGCTTATCCACAACGCTCCTTGGGTCTTCTCTGGTAT
GTTTGCACCCCTCGCCCCTTTACTCTGCCGGGTCTAATGAAGCGATAGGA
ATTTGGAAGATCATCAAGGGGTGGATGGACCCGGTGATTGTGTCGAAAGT
GAACTTCACCAACAAGGTGTCCGATCTGGAGAAGTTCATTGCCCCGGAGC
AGATTGTGAAAGAGCTGAAGGGCAAGGAAGACTGGACCTATGAATACGTC
GAGCCGGTTGCCGGCGAGAACGAGCTGATGGCGGATACGGAAACCCGCGA
CCGCATTTACAGCGAGCGGTTGAAGATTGGTGAGGAGCTGCTGCTGCGGA
CCTCGGAATGGGTCTCCACCAGCCAGCGAAAGGACGCGGCCGCTGCCACA
ACGGCCCGAGAACGACGGAGCGAGACGATCGAATCGCTGCGCCAGAACTA
CTGGGAGCTGGATCCGTATGTGCGCGGGCGCACGTTCCTGGACCGGACGG
GAGTAGTCAAGAAGGGGGGCAAGATTGACTTTTACCCCAGCCCCGATTTG
GAGCCCGCCACGGCTAAGATGCTGGAAGTGGAGCATTTTGAGCGAGCTCA
GGTCAAGGTGGTGGATATGCAATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000231:77606..79180-

>ATCC10864_009964-T1 ID=ATCC10864_009964-T1|Name=ATCC10864_009964-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5604bp|location=Sequence derived from alignment at MCQH01000231:77606..79180- (Aspergillus niger ATCC 10864)
GAATTTGGAAGATCATCAAGGGGTGGATGGACCCGGTGATTGTGTCGAAA
GTGAACTTCACCAACAAGGTGTCCGATCTGGAGAAGTTCATTGCCCCGGA
GCAGATTGTGAAAGAGCTGAAGGGCAAGGAAGACTGGACCTATGAATACG
TCGAGCCGGTTGCCGGCGAGAACGAGCTGATGGCGGATACGGAAACCCGC
GACCGCATTTACAGCGAGCGGTTGAAGATTGGTGAGGAGCTGCTGCTGCG
GACCTCGGAATGGGTCTCCACCAGCCAGCGAAAGGACGCGGCCGCTGCCA
CAACGGCCCGAGAACGACGGAGCGAGACGATCGAATCGCTGCGCCAGAAC
TACTGGGAGCTGGATCCGTATGTGCGCGGGCGCACGTTCCTGGACCGGAC
GGGAGTAGTCAAGAAGGGGGGCAAGATTGACTTTTACCCCAGCCCCGATT
TGGAGCCCGCCACGGCTAAGATGCTGGAAGTGGAGCATTTTGAGCGAGCT
CAGGTCAAGGTGGTGGATATGCAATGAGAATATGCACCGGTGAAATTCAT
CATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTTA
TCCACAACGCTCCTTGGGTCTTCTCTGACCATCATCTTCGACATGACTGG
CTTTGGCCTCTCGAACATGATGACTACCAACGGCATTCAACCCGGCCACG
TCGGCAATCTGACTCAGGATCAAGAGGCCAAATTACAACAGCTCTGGTCC
ATTGTCCTTACTCTGCTGGACGTGAAGTCCCTACAAAGTGGAGATGCCTC
GGCACAGACCCAGCCCGATCAGCGTCCAAGCACGTCGCTCTCCCGAGCCG
ACACCGTCGTTTCCGCTCATGGCCAGACGGCTTTCACAGAAGACTTGTCC
CGAGTCCTCCGGGAGAATGGTATGAGCAACCCTGACATTAAGTCCGTCCG
GGAGGCCCTGAGTGACACCTCGATCGACGACCTTCGCTCGGGTCTGTTGT
ACACTGCCAAACATGACTCCCCTGACGTCCTCCTACTTCGCTTCTTACGC
GCTCGCAAGTGGGACGTCAGCAAGGCCTTCGGGATGATGTTGAAGGCGCT
CGTCTGGCGCAAGGATCAGCACGTCGACGACAAGGTGATTGCGAACCCTG
AACTTGCCGCATTAGTCACGTCGCAGAACACGGTGGACACGCACGCGGCC
AAGGAGTGCAAGGACTTCTTGGACCAAATGCGTATGGGGAAATGTTATAT
GCACGGAACCGACCGCGATGGCCGACCTGTTCTTGTGGTGCGCGTTCGCT
TCCATCAACCCTCAAAACAGAGCGAGGCAGTGATCAATCGATTCATCCTT
CATACGATCGAGACAGTCCGGTTATTGCTGGCGCCTCCCCAGGAGACAGT
GGAATTTGGAAGATCATCAAGGGGTGGATGGACCCGGTGATTGTGTCGAA
AGTGAACTTCACCAACAAGGTGTCCGATCTGGAGAAGTTCATTGCCCCGG
AGCAGATTGTGAAAGAGCTGAAGGGCAAGGAAGACTGGACCTATGAATAC
GTCGAGCCGGTTGCCGGCGAGAACGAGCTGATGGCGGATACGGAAACCCG
CGACCGCATTTACAGCGAGCGGTTGAAGATTGGTGAGGAGCTGCTGCTGC
GGACCTCGGAATGGGTCTCCACCAGCCAGCGAAAGGACGCGGCCGCTGCC
ACAACGGCCCGAGAACGACGGAGCGAGACGATCGAATCGCTGCGCCAGAA
CTACTGGGAGCTGGATCCGTATGTGCGCGGGCGCACGTTCCTGGACCGGA
CGGGAGTAGTCAAGAAGGGGGGCAAGATTGACTTTTACCCCAGCCCCGAT
TTGGAGCCCGCCACGGCTAAGATGCTGGAAGTGGAGCATTTTGAGCGAGC
TCAGGTCAAGGTGGTGGATATGCAATGAGAATATGCACCGGTGAAATTCA
TCATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCTT
ATCCACAACGCTCCTTGGGTCTTCTCTGACCATCATCTTCGACATGACTG
GCTTTGGCCTCTCGAACATGATGACTACCAACGGCATTCAACCCGGCCAC
GTCGGCAATCTGACTCAGGATCAAGAGGCCAAATTACAACAGCTCTGGTC
CATTGTCCTTACTCTGCTGGACGTGAAGTCCCTACAAAGTGGAGATGCCT
CGGCACAGACCCAGCCCGATCAGCGTCCAAGCACGTCGCTCTCCCGAGCC
GACACCGTCGTTTCCGCTCATGGCCAGACGGCTTTCACAGAAGACTTGTC
CCGAGTCCTCCGGGAGAATGGTATGAGCAACCCTGACATTAAGTCCGTCC
GGGAGGCCCTGAGTGACACCTCGATCGACGACCTTCGCTCGGGTCTGTTG
TACACTGCCAAACATGACTCCCCTGACGTCCTCCTACTTCGCTTCTTACG
CGCTCGCAAGTGGGACGTCAGCAAGGCCTTCGGGATGATGTTGAAGGCGC
TCGTCTGGCGCAAGGATCAGCACGTCGACGACAAGGTGATTGCGAACCCT
GAACTTGCCGCATTAGTCACGTCGCAGAACACGGTGGACACGCACGCGGC
CAAGGAGTGCAAGGACTTCTTGGACCAAATGCGTATGGGGAAATGTTATA
TGCACGGAACCGACCGCGATGGCCGACCTGTTCTTGTGGTGCGCGTTCGC
TTCCATCAACCCTCAAAACAGAGCGAGGCAGTGATCAATCGATTCATCCT
TCATACGATCGAGACAGTCCGGTTATTGCTGGCGCCTCCCCAGGAGACAG
TGGAATTTGGAAGATCATCAAGGGGTGGATGGACCCGGTGATTGTGTCGA
AAGTGAACTTCACCAACAAGGTGTCCGATCTGGAGAAGTTCATTGCCCCG
GAGCAGATTGTGAAAGAGCTGAAGGGCAAGGAAGACTGGACCTATGAATA
CGTCGAGCCGGTTGCCGGCGAGAACGAGCTGATGGCGGATACGGAAACCC
GCGACCGCATTTACAGCGAGCGGTTGAAGATTGGTGAGGAGCTGCTGCTG
CGGACCTCGGAATGGGTCTCCACCAGCCAGCGAAAGGACGCGGCCGCTGC
CACAACGGCCCGAGAACGACGGAGCGAGACGATCGAATCGCTGCGCCAGA
ACTACTGGGAGCTGGATCCGTATGTGCGCGGGCGCACGTTCCTGGACCGG
ACGGGAGTAGTCAAGAAGGGGGGCAAGATTGACTTTTACCCCAGCCCCGA
TTTGGAGCCCGCCACGGCTAAGATGCTGGAAGTGGAGCATTTTGAGCGAG
CTCAGGTCAAGGTGGTGGATATGCAATGAGAATATGCACCGGTGAAATTC
ATCATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGCT
TATCCACAACGCTCCTTGGGTCTTCTCTGACCATCATCTTCGACATGACT
GGCTTTGGCCTCTCGAACATGATGACTACCAACGGCATTCAACCCGGCCA
CGTCGGCAATCTGACTCAGGATCAAGAGGCCAAATTACAACAGCTCTGGT
CCATTGTCCTTACTCTGCTGGACGTGAAGTCCCTACAAAGTGGAGATGCC
TCGGCACAGACCCAGCCCGATCAGCGTCCAAGCACGTCGCTCTCCCGAGC
CGACACCGTCGTTTCCGCTCATGGCCAGACGGCTTTCACAGAAGACTTGT
CCCGAGTCCTCCGGGAGAATGGTATGAGCAACCCTGACATTAAGTCCGTC
CGGGAGGCCCTGAGTGACACCTCGATCGACGACCTTCGCTCGGGTCTGTT
GTACACTGCCAAACATGACTCCCCTGACGTCCTCCTACTTCGCTTCTTAC
GCGCTCGCAAGTGGGACGTCAGCAAGGCCTTCGGGATGATGTTGAAGGCG
CTCGTCTGGCGCAAGGATCAGCACGTCGACGACAAGGTGATTGCGAACCC
TGAACTTGCCGCATTAGTCACGTCGCAGAACACGGTGGACACGCACGCGG
CCAAGGAGTGCAAGGACTTCTTGGACCAAATGCGTATGGGGAAATGTTAT
ATGCACGGAACCGACCGCGATGGCCGACCTGTTCTTGTGGTGCGCGTTCG
CTTCCATCAACCCTCAAAACAGAGCGAGGCAGTGATCAATCGATTCATCC
TTCATACGATCGAGACAGTCCGGTTATTGCTGGCGCCTCCCCAGGAGACA
GTGGAATTTGGAAGATCATCAAGGGGTGGATGGACCCGGTGATTGTGTCG
AAAGTGAACTTCACCAACAAGGTGTCCGATCTGGAGAAGTTCATTGCCCC
GGAGCAGATTGTGAAAGAGCTGAAGGGCAAGGAAGACTGGACCTATGAAT
ACGTCGAGCCGGTTGCCGGCGAGAACGAGCTGATGGCGGATACGGAAACC
CGCGACCGCATTTACAGCGAGCGGTTGAAGATTGGTGAGGAGCTGCTGCT
GCGGACCTCGGAATGGGTCTCCACCAGCCAGCGAAAGGACGCGGCCGCTG
CCACAACGGCCCGAGAACGACGGAGCGAGACGATCGAATCGCTGCGCCAG
AACTACTGGGAGCTGGATCCGTATGTGCGCGGGCGCACGTTCCTGGACCG
GACGGGAGTAGTCAAGAAGGGGGGCAAGATTGACTTTTACCCCAGCCCCG
ATTTGGAGCCCGCCACGGCTAAGATGCTGGAAGTGGAGCATTTTGAGCGA
GCTCAGGTCAAGGTGGTGGATATGCAATGAGAATATGCACCGGTGAAATT
CATCATCGAGTGTTTCCAGGAGAACTACCCTGAGTCGCTGGGATACATGC
TTATCCACAACGCTCCTTGGGTCTTCTCTGACCATCATCTTCGACATGAC
TGGCTTTGGCCTCTCGAACATGATGACTACCAACGGCATTCAACCCGGCC
ACGTCGGCAATCTGACTCAGGATCAAGAGGCCAAATTACAACAGCTCTGG
TCCATTGTCCTTACTCTGCTGGACGTGAAGTCCCTACAAAGTGGAGATGC
CTCGGCACAGACCCAGCCCGATCAGCGTCCAAGCACGTCGCTCTCCCGAG
CCGACACCGTCGTTTCCGCTCATGGCCAGACGGCTTTCACAGAAGACTTG
TCCCGAGTCCTCCGGGAGAATGGTATGAGCAACCCTGACATTAAGTCCGT
CCGGGAGGCCCTGAGTGACACCTCGATCGACGACCTTCGCTCGGGTCTGT
TGTACACTGCCAAACATGACTCCCCTGACGTCCTCCTACTTCGCTTCTTA
CGCGCTCGCAAGTGGGACGTCAGCAAGGCCTTCGGGATGATGTTGAAGGC
GCTCGTCTGGCGCAAGGATCAGCACGTCGACGACAAGGTGATTGCGAACC
CTGAACTTGCCGCATTAGTCACGTCGCAGAACACGGTGGACACGCACGCG
GCCAAGGAGTGCAAGGACTTCTTGGACCAAATGCGTATGGGGAAATGTTA
TATGCACGGAACCGACCGCGATGGCCGACCTGTTCTTGTGGTGCGCGTTC
GCTTCCATCAACCCTCAAAACAGAGCGAGGCAGTGATCAATCGATTCATC
CTTCATACGATCGAGACAGTCCGGTTATTGCTGGCGCCTCCCCAGGAGAC
AGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009964ATCC10864_009964Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009964-T1ATCC10864_009964-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009964-T1.cdsATCC10864_009964-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009964-T1.exon4ATCC10864_009964-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009964-T1.exon3ATCC10864_009964-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009964-T1.exon2ATCC10864_009964-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009964-T1.exon1ATCC10864_009964-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00650
InterProIPR011074
InterProIPR036273
PFAMPF13716
PFAMPF03765
InterProIPR036865
InterProIPR001251
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:77606..79180 -
Powered by Drupal