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ATCC10864_010100-T1, ATCC10864_010100-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010100-T1
Unique NameATCC10864_010100-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:573960..574900-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010100-T1 ID=ATCC10864_010100-T1|Name=ATCC10864_010100-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=941bp|location=Sequence derived from alignment at MCQH01000231:573960..574900- (Aspergillus niger ATCC 10864)
ATGGTAAGAATATTGTTCTGATCGTCTATCAGTCTCGTTTCCGTGTTCCT
GGGCGTCGGAGAAGTGTTTTCGGTCAATCGGCATATTGCGAGATGGGACG
ACATACGGCACTCTTTTCCTACGGCGAACCGAGTTGAAAGCCGCCACTAT
ACGAAGCGCAACGATCGAAGCTGCAAACGAAAATCCTGAACCGTCAATAT
CAATACAAAAATGGTCAAAGATGATGGAATTCTCGACCGGGGTTTGCCCC
GCGATCAATTGTGGGATTGAAGTGAAAGATGTTGAGTGCGACCGAAACCA
TCAAAATCGAATTGTTCTGAGCCACGACACCCTTGCTATACCATCATCTG
CTTTTCCTCACTTTCTCGGAACAATATCATTCCCACCGTGAACCACCATC
TCCGACGACGAGGAACTCAGGAACAGGCTGCGGACGTTGTGTGATAACCA
TCCTACCACAGCAGGCGCTGATCAAACTCTTCTCGCATTCAGGTCAACGT
TCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGCACA
CCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGGTGAACACTGCCCAA
GCAACCGAGCCCACCGCGCGACCTATGCTGATGCAATCATGATCTCTACA
GGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCG
GTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACC
AAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCA
GCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGGTACGTTCATACGC
TCGGCATACGATCTATGGGTGATGCTAACCATCTCTCTTCTTTTTCAACA
GTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAA
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Coding sequence (CDS) from alignment at MCQH01000231:573960..574900-

>ATCC10864_010100-T1 ID=ATCC10864_010100-T1|Name=ATCC10864_010100-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1284bp|location=Sequence derived from alignment at MCQH01000231:573960..574900- (Aspergillus niger ATCC 10864)
TGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTCTAAGCCTCCCTGT
TCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTATGGTGGT
CAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAAGATCGT
CCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTTCTCTGA
AGCGCTGCAAGCACTTCGAGCTTGGGTCAACGTTCCGAAAACCCGCCGGA
CGTACTGCAAGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACC
CAGTACAAGGCTGGAAAGATGTGGTGACAAGAAGACCAAGGGTGCTGCTC
TTGTCTTCTAAGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGG
AAGCAGAGCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGC
CAAGACCACCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGA
CCAAGAAGCAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGGTCA
ACGTTCCGAAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAG
CACACCCAGCACAAGGTCACCCAGTACAAGGCTGGAAAGATGTGGTGACA
AGAAGACCAAGGGTGCTGCTCTTGTCTTCTAAGCCTCCCTGTTCGCCCAG
GGTAAGCGTCGTTACGACCGGAAGCAGAGCGGTTATGGTGGTCAGACCAA
GCCCGTCTTCCACAAGAAGGCCAAGACCACCAAGAAGATCGTCCTTCGTC
TTGAGTGCACTGCTTGCAAGACCAAGAAGCAGCTTTCTCTGAAGCGCTGC
AAGCACTTCGAGCTTGGGTCAACGTTCCGAAAACCCGCCGGACGTACTGC
AAGTCCAAGGAGTGCCACAAGCACACCCAGCACAAGGTCACCCAGTACAA
GGCTGGAAAGATGTGGTGACAAGAAGACCAAGGGTGCTGCTCTTGTCTTC
TAAGCCTCCCTGTTCGCCCAGGGTAAGCGTCGTTACGACCGGAAGCAGAG
CGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCCAAGACCA
CCAAGAAGATCGTCCTTCGTCTTGAGTGCACTGCTTGCAAGACCAAGAAG
CAGCTTTCTCTGAAGCGCTGCAAGCACTTCGAGCTTGGGTCAACGTTCCG
AAAACCCGCCGGACGTACTGCAAGTCCAAGGAGTGCCACAAGCACACCCA
GCACAAGGTCACCCAGTACAAGGCTGGAAAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL44ATCC10864_010100Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010100-T1ATCC10864_010100-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010100-T1.cdsATCC10864_010100-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010100-T1.exon4ATCC10864_010100-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010100-T1.exon3ATCC10864_010100-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010100-T1.exon2ATCC10864_010100-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010100-T1.exon1ATCC10864_010100-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011332
InterProIPR000552
PFAMPF00935
Properties
Property NameValue
NoteBUSCO:EOG09265JX6
Product40s ribosomal protein L44e
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:573960..574900 -
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