You are here

Home

ATCC10864_010108-T1, ATCC10864_010108-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010108-T1
Unique NameATCC10864_010108-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:590282..592501+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010108-T1 ID=ATCC10864_010108-T1|Name=ATCC10864_010108-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2220bp|location=Sequence derived from alignment at MCQH01000231:590282..592501+ (Aspergillus niger ATCC 10864)
ATGACTACCCTGCGTGTTCCAACTGCCAAAAGGCCGGAGCGATATGTGAC
AAAGCCACCGTACGACAAGAGAATGGCACCCAGAACGAGTGGGATCCCTC
TTCCCCACCTGACTGGAAACATATTACTTCTGGAGTACTGACGATTGTAG
ATACACCCGTGCGTTGCAGGATCGCATCGCCTACCTTGAGTCCCAGTTAG
AATCGAAACCCATGAGTAGCCGGGCCAGCAGCCATGTCGCCCATCCAGTT
GCTGCATTGCTGTCCCCTCCCCATCCGGAGACTCCCACTAACTCAAACCC
TCGCCTGGATCAAAATGCCGTCGGGGAATTAGTGGGATTTCTTGCACTCA
ACTCCTCGGAGGCGCCTGCATACGTAGGTTCCAGTTCGGGCCTCTCCTTG
GCTACGAATCTTGGGGAAATGGTCCAAGCCACGGTCTGGAACCAGGCTCT
GTCTTCAGCTCGAGCAGCGTCGTCAGGTAGATCCGGACCTGCAGCGGGAC
AAGGATCCACGGGTCTGCCTCCCCAGCCTCCAGGCGAGAGGGCCGGTCAT
GTCAATGATCGAACTCGACCACCACCACGAGTGGAGGAGGTGTTGGTGAA
GAGCAGCGAGCCTCCTGACGATGAAATGGGATCCAGGATTCTTCATGCCT
ATCTAACACGGATCCATGTTCGCTATCCGTTTCTCGACCGCACGGAGTTG
TGGCGACTGCATGAAGCGCGCTGGCGACTGGCGCAGAAGAAGCGGGAGGA
GCTGACCAAGGAGGAACGGGTAGGCATATTCAAGCTGTATCTTGTATATG
CCATCGGGGCTACATCGATTCAGTTAAGTGAAAACTACTCATATACCACG
CCTGAGGTATGTTGCTCCTGTGGTACGCAACTTGTTTGATCTAATCACCT
CACCAGCGATTCTACCTGACCGCTCTGCAACAACTACCAAATATGTGCGA
AATGCGATCTATAGAGAATATTGAGGCTATGACCTTGCTGATTGTGTATC
ACCTTCGCTCAGCGTCTGGTCAGGGCATGTGGTACATGGTAGGCCTCGCT
ATGCGTACCGCTATAGACCTTGGACTGCATCGCAAAGCAAACGAGATCAA
CATGGATTCCTTCACTGCGCAAATGCGGCGGCGTCTTTTCTGGACCGTTT
ATTACCTAGAGCGTGTCGTGTCAATGTCCCTGGGCCGGCCATTTAGCATC
GCAGACAGACACATCGACCTTCCTTTGCCTGCAGACATCGACGACGATGT
CCGCGATCCTGCCTTGCTAGCCGCCCCTCCAGCTCCGACTAGAATCACCA
CACTGACCTTTGCCATATTCCTCATGCGCCTGCGGCGCATCGACTCCGAA
ATTCAGCATAAGATCTACCGAGCCGATCGACCACTGCACACTTTACGCTC
GAAGATGGACCGACTCTTTCTCCAACTCGAAGAATGGAAAGAATCAGCTC
TGCGACGTTTCACCGGATCCGACCTGGACTATCCAATGCTGCACTACCAC
CGAGCCCTACGACTCCTCATCCAGCCATTCTTACCCTCACTCCCCCTCTC
CGACCCATACTATCACATCTGTCTCCGCGCAGCCGGAAACACCTGCCAAA
CCCACAAGAAGCTACACCAAACCCTTGAATACGGCCACTCCTTCCTGGCT
GTGCAGACGATCTTCATGGCTGGGATCACCCTGCTCTACGCCCTATGGAC
CCACACAAGCGACGTCTGGTCCGTCCAAATGAGCAACGACATCCGCGCCT
GCTCGACCGTCCTATTTGTGATGGGTGAGCGCGCCGAATGGGTCAAGAAA
TACCGCGACGCATTCGAGCTGCTCGTCAACGCCGCCATGGAGAAACTAGA
GGGAAGCGATGCATCCAAAAAGGTGGGCATGGCGGAACTAATGACAGCCC
AACACAGTAGCAGTGGTGGTATAAGCGCAGGAATGTTCAGGGATCACCAT
AATCTCACCACCACATGCAGCAACAGCAACAACTCCACTGGCGGCATGGC
ACCAGATATGAATAACACAGCGGCGGCCAACATGGCCGCTCAGACTGCTT
CTGAACCCACTAGCAGTCAGGACCATGGCGTGCGCATGGCATTGCAGATC
GCGCCCTGGATCGACCTGGAAGAAGATAGCCCGTTCTGGATGCCTGATTT
CGAGACGCTGGAGAGTTTGTCGGGGAATTTATGGGATAGTGGCGATTTGG
CTCCGTTTGGGCCTCTTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000231:590282..592501+

>ATCC10864_010108-T1 ID=ATCC10864_010108-T1|Name=ATCC10864_010108-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6237bp|location=Sequence derived from alignment at MCQH01000231:590282..592501+ (Aspergillus niger ATCC 10864)
ATGACTACCCTGCGTGTTCCAACTGCCAAAAGGCCGGAGCGATATGTGAC
AAAGCCACCATACACCCGTGCGTTGCAGGATCGCATCGCCTACCTTGAGT
CCCAGTTAGAATCGAAACCCATGAGTAGCCGGGCCAGCAGCCATGTCGCC
CATCCAGTTGCTGCATTGCTGTCCCCTCCCCATCCGGAGACTCCCACTAA
CTCAAACCCTCGCCTGGATCAAAATGCCGTCGGGGAATTAGTGGGATTTC
TTGCACTCAACTCCTCGGAGGCGCCTGCATACGTAGGTTCCAGTTCGGGC
CTCTCCTTGGCTACGAATCTTGGGGAAATGGTCCAAGCCACGGTCTGGAA
CCAGGCTCTGTCTTCAGCTCGAGCAGCGTCGTCAGGTAGATCCGGACCTG
CAGCGGGACAAGGATCCACGGGTCTGCCTCCCCAGCCTCCAGGCGAGAGG
GCCGGTCATGTCAATGATCGAACTCGACCACCACCACGAGTGGAGGAGGT
GTTGGTGAAGAGCAGCGAGCCTCCTGACGATGAAATGGGATCCAGGATTC
TTCATGCCTATCTAACACGGATCCATGTTCGCTATCCGTTTCTCGACCGC
ACGGAGTTGTGGCGACTGCATGAAGCGCGCTGGCGACTGGCGCAGAAGAA
GCGGGAGGAGCTGACCAAGGAGGAACGGGTAGGCATATTCAAGCTGTATC
TTGTATATGCCATCGGGGCTACATCGATTCAGTTAAGTGAAAACTACTCA
TATACCACGCCTGAGCGATTCTACCTGACCGCTCTGCAACAACTACCAAA
TATGTGCGAAATGCGATCTATAGAGAATATTGAGGCTATGACCTTGCTGA
TTGTGTATCACCTTCGCTCAGCGTCTGGTCAGGGCATGTGGTACATGGTA
GGCCTCGCTATGCGTACCGCTATAGACCTTGGACTGCATCGCAAAGCAAA
CGAGATCAACATGGATTCCTTCACTGCGCAAATGCGGCGGCGTCTTTTCT
GGACCGTTTATTACCTAGAGCGTGTCGTGTCAATGTCCCTGGGCCGGCCA
TTTAGCATCGCAGACAGACACATCGACCTTCCTTTGCCTGCAGACATCGA
CGACGATGTCCGCGATCCTGCCTTGCTAGCCGCCCCTCCAGCTCCGACTA
GAATCACCACACTGACCTTTGCCATATTCCTCATGCGCCTGCGGCGCATC
GACTCCGAAATTCAGCATAAGATCTACCGAGCCGATCGACCACTGCACAC
TTTACGCTCGAAGATGGACCGACTCTTTCTCCAACTCGAAGAATGGAAAG
AATCAGCTCTGCGACGTTTCACCGGATCCGACCTGGACTATCCAATGCTG
CACTACCACCGAGCCCTACGACTCCTCATCCAGCCATTCTTACCCTCACT
CCCCCTCTCCGACCCATACTATCACATCTGTCTCCGCGCAGCCGGAAACA
CCTGCCAAACCCACAAGAAGCTACACCAAACCCTTGAATACGGCCACTCC
TTCCTGGCTGTGCAGACGATCTTCATGGCTGGGATCACCCTGCTCTACGC
CCTATGGACCCACACAAGCGACGTCTGGTCCGTCCAAATGAGCAACGACA
TCCGCGCCTGCTCGACCGTCCTATTTGTGATGGGTGAGCGCGCCGAATGG
GTCAAGAAATACCGCGACGCATTCGAGCTGCTCGTCAACGCCGCCATGGA
GAAACTAGAGGGAAGCGATGCATCCAAAAAGGTGGGCATGGCGGAACTAA
TGACAGCCCAACACAGTAGCAGTGGTGGTATAAGCGCAGGAATGTTCAGG
GATCACCATAATCTCACCACCACATGCAGCAACAGCAACAACTCCACTGG
CGGCATGGCACCAGATATGAATAACACAGCGGCGGCCAACATGGCCGCTC
AGACTGCTTCTGAACCCACTAGCAGTCAGGACCATGGCGTGCGCATGGCA
TTGCAGATCGCGCCCTGGATCGACCTGGAAGAAGATAGCCCGTTCTGGAT
GCCTGATTTCGAGACGCTGGAGAGTTTGTCGGGGAATTTATGGGATAGTG
GCGATTTGGCTCCGTTTGGGCCTCTTTAGATGACTACCCTGCGTGTTCCA
ACTGCCAAAAGGCCGGAGCGATATGTGACAAAGCCACCATACACCCGTGC
GTTGCAGGATCGCATCGCCTACCTTGAGTCCCAGTTAGAATCGAAACCCA
TGAGTAGCCGGGCCAGCAGCCATGTCGCCCATCCAGTTGCTGCATTGCTG
TCCCCTCCCCATCCGGAGACTCCCACTAACTCAAACCCTCGCCTGGATCA
AAATGCCGTCGGGGAATTAGTGGGATTTCTTGCACTCAACTCCTCGGAGG
CGCCTGCATACGTAGGTTCCAGTTCGGGCCTCTCCTTGGCTACGAATCTT
GGGGAAATGGTCCAAGCCACGGTCTGGAACCAGGCTCTGTCTTCAGCTCG
AGCAGCGTCGTCAGGTAGATCCGGACCTGCAGCGGGACAAGGATCCACGG
GTCTGCCTCCCCAGCCTCCAGGCGAGAGGGCCGGTCATGTCAATGATCGA
ACTCGACCACCACCACGAGTGGAGGAGGTGTTGGTGAAGAGCAGCGAGCC
TCCTGACGATGAAATGGGATCCAGGATTCTTCATGCCTATCTAACACGGA
TCCATGTTCGCTATCCGTTTCTCGACCGCACGGAGTTGTGGCGACTGCAT
GAAGCGCGCTGGCGACTGGCGCAGAAGAAGCGGGAGGAGCTGACCAAGGA
GGAACGGGTAGGCATATTCAAGCTGTATCTTGTATATGCCATCGGGGCTA
CATCGATTCAGTTAAGTGAAAACTACTCATATACCACGCCTGAGCGATTC
TACCTGACCGCTCTGCAACAACTACCAAATATGTGCGAAATGCGATCTAT
AGAGAATATTGAGGCTATGACCTTGCTGATTGTGTATCACCTTCGCTCAG
CGTCTGGTCAGGGCATGTGGTACATGGTAGGCCTCGCTATGCGTACCGCT
ATAGACCTTGGACTGCATCGCAAAGCAAACGAGATCAACATGGATTCCTT
CACTGCGCAAATGCGGCGGCGTCTTTTCTGGACCGTTTATTACCTAGAGC
GTGTCGTGTCAATGTCCCTGGGCCGGCCATTTAGCATCGCAGACAGACAC
ATCGACCTTCCTTTGCCTGCAGACATCGACGACGATGTCCGCGATCCTGC
CTTGCTAGCCGCCCCTCCAGCTCCGACTAGAATCACCACACTGACCTTTG
CCATATTCCTCATGCGCCTGCGGCGCATCGACTCCGAAATTCAGCATAAG
ATCTACCGAGCCGATCGACCACTGCACACTTTACGCTCGAAGATGGACCG
ACTCTTTCTCCAACTCGAAGAATGGAAAGAATCAGCTCTGCGACGTTTCA
CCGGATCCGACCTGGACTATCCAATGCTGCACTACCACCGAGCCCTACGA
CTCCTCATCCAGCCATTCTTACCCTCACTCCCCCTCTCCGACCCATACTA
TCACATCTGTCTCCGCGCAGCCGGAAACACCTGCCAAACCCACAAGAAGC
TACACCAAACCCTTGAATACGGCCACTCCTTCCTGGCTGTGCAGACGATC
TTCATGGCTGGGATCACCCTGCTCTACGCCCTATGGACCCACACAAGCGA
CGTCTGGTCCGTCCAAATGAGCAACGACATCCGCGCCTGCTCGACCGTCC
TATTTGTGATGGGTGAGCGCGCCGAATGGGTCAAGAAATACCGCGACGCA
TTCGAGCTGCTCGTCAACGCCGCCATGGAGAAACTAGAGGGAAGCGATGC
ATCCAAAAAGGTGGGCATGGCGGAACTAATGACAGCCCAACACAGTAGCA
GTGGTGGTATAAGCGCAGGAATGTTCAGGGATCACCATAATCTCACCACC
ACATGCAGCAACAGCAACAACTCCACTGGCGGCATGGCACCAGATATGAA
TAACACAGCGGCGGCCAACATGGCCGCTCAGACTGCTTCTGAACCCACTA
GCAGTCAGGACCATGGCGTGCGCATGGCATTGCAGATCGCGCCCTGGATC
GACCTGGAAGAAGATAGCCCGTTCTGGATGCCTGATTTCGAGACGCTGGA
GAGTTTGTCGGGGAATTTATGGGATAGTGGCGATTTGGCTCCGTTTGGGC
CTCTTTAGATGACTACCCTGCGTGTTCCAACTGCCAAAAGGCCGGAGCGA
TATGTGACAAAGCCACCATACACCCGTGCGTTGCAGGATCGCATCGCCTA
CCTTGAGTCCCAGTTAGAATCGAAACCCATGAGTAGCCGGGCCAGCAGCC
ATGTCGCCCATCCAGTTGCTGCATTGCTGTCCCCTCCCCATCCGGAGACT
CCCACTAACTCAAACCCTCGCCTGGATCAAAATGCCGTCGGGGAATTAGT
GGGATTTCTTGCACTCAACTCCTCGGAGGCGCCTGCATACGTAGGTTCCA
GTTCGGGCCTCTCCTTGGCTACGAATCTTGGGGAAATGGTCCAAGCCACG
GTCTGGAACCAGGCTCTGTCTTCAGCTCGAGCAGCGTCGTCAGGTAGATC
CGGACCTGCAGCGGGACAAGGATCCACGGGTCTGCCTCCCCAGCCTCCAG
GCGAGAGGGCCGGTCATGTCAATGATCGAACTCGACCACCACCACGAGTG
GAGGAGGTGTTGGTGAAGAGCAGCGAGCCTCCTGACGATGAAATGGGATC
CAGGATTCTTCATGCCTATCTAACACGGATCCATGTTCGCTATCCGTTTC
TCGACCGCACGGAGTTGTGGCGACTGCATGAAGCGCGCTGGCGACTGGCG
CAGAAGAAGCGGGAGGAGCTGACCAAGGAGGAACGGGTAGGCATATTCAA
GCTGTATCTTGTATATGCCATCGGGGCTACATCGATTCAGTTAAGTGAAA
ACTACTCATATACCACGCCTGAGCGATTCTACCTGACCGCTCTGCAACAA
CTACCAAATATGTGCGAAATGCGATCTATAGAGAATATTGAGGCTATGAC
CTTGCTGATTGTGTATCACCTTCGCTCAGCGTCTGGTCAGGGCATGTGGT
ACATGGTAGGCCTCGCTATGCGTACCGCTATAGACCTTGGACTGCATCGC
AAAGCAAACGAGATCAACATGGATTCCTTCACTGCGCAAATGCGGCGGCG
TCTTTTCTGGACCGTTTATTACCTAGAGCGTGTCGTGTCAATGTCCCTGG
GCCGGCCATTTAGCATCGCAGACAGACACATCGACCTTCCTTTGCCTGCA
GACATCGACGACGATGTCCGCGATCCTGCCTTGCTAGCCGCCCCTCCAGC
TCCGACTAGAATCACCACACTGACCTTTGCCATATTCCTCATGCGCCTGC
GGCGCATCGACTCCGAAATTCAGCATAAGATCTACCGAGCCGATCGACCA
CTGCACACTTTACGCTCGAAGATGGACCGACTCTTTCTCCAACTCGAAGA
ATGGAAAGAATCAGCTCTGCGACGTTTCACCGGATCCGACCTGGACTATC
CAATGCTGCACTACCACCGAGCCCTACGACTCCTCATCCAGCCATTCTTA
CCCTCACTCCCCCTCTCCGACCCATACTATCACATCTGTCTCCGCGCAGC
CGGAAACACCTGCCAAACCCACAAGAAGCTACACCAAACCCTTGAATACG
GCCACTCCTTCCTGGCTGTGCAGACGATCTTCATGGCTGGGATCACCCTG
CTCTACGCCCTATGGACCCACACAAGCGACGTCTGGTCCGTCCAAATGAG
CAACGACATCCGCGCCTGCTCGACCGTCCTATTTGTGATGGGTGAGCGCG
CCGAATGGGTCAAGAAATACCGCGACGCATTCGAGCTGCTCGTCAACGCC
GCCATGGAGAAACTAGAGGGAAGCGATGCATCCAAAAAGGTGGGCATGGC
GGAACTAATGACAGCCCAACACAGTAGCAGTGGTGGTATAAGCGCAGGAA
TGTTCAGGGATCACCATAATCTCACCACCACATGCAGCAACAGCAACAAC
TCCACTGGCGGCATGGCACCAGATATGAATAACACAGCGGCGGCCAACAT
GGCCGCTCAGACTGCTTCTGAACCCACTAGCAGTCAGGACCATGGCGTGC
GCATGGCATTGCAGATCGCGCCCTGGATCGACCTGGAAGAAGATAGCCCG
TTCTGGATGCCTGATTTCGAGACGCTGGAGAGTTTGTCGGGGAATTTATG
GGATAGTGGCGATTTGGCTCCGTTTGGGCCTCTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010108ATCC10864_010108Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010108-T1.exon1ATCC10864_010108-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010108-T1.exon2ATCC10864_010108-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010108-T1.exon3ATCC10864_010108-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010108-T1.cdsATCC10864_010108-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010108-T1ATCC10864_010108-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007219
PFAMPF04082
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:590282..592501 +
Powered by Drupal