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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:607611..608256+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010113-T1 ID=ATCC10864_010113-T1|Name=ATCC10864_010113-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=646bp|location=Sequence derived from alignment at MCQH01000231:607611..608256+ (Aspergillus niger ATCC 10864)
ATGCCCCGCGCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGA
CTTCCACGTCTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCA
CGCGCTACCACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTA
TGCGGATCCCTGCGCCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGA
GAGTGATCCCGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGT
TCCGCATGGGGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCG
AGAGTCGAGAGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGC
GGTTTGGATGACTAGGAGTGGGATGGTGGAGAATGTTAAGACTGTAAGTC
CTTTTTTTATTAACCTTCCTCGCGATGGGGTATTGGGTTGGGATTTATGC
TAATGAGGCTGGGTGATGTTAGGCCGTCACGTTCATCGAGCAGGGCCATG
TTCGCGTCGGGACAGAGGTCGTTACGGATCCGGCGTACTTGGTTACGAGA
AATCTGGAGGATTTCGTGACATGGGTGGATAGCTCCAAGATTAAGAGGAG
TATTATGCAGTATCGGGATAATTTGGATGATTTTGATATGTTGTGA back to topCoding sequence (CDS) from alignment at MCQH01000231:607611..608256+ >ATCC10864_010113-T1 ID=ATCC10864_010113-T1|Name=ATCC10864_010113-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1134bp|location=Sequence derived from alignment at MCQH01000231:607611..608256+ (Aspergillus niger ATCC 10864)
ATGCCCCGCGCCCTCAAGCATCACGAAAAGAAACTCCTCCGCAAAGTCGA
CTTCCACGTCTACAAATCCGACAACAACCACCGGGAATCTCAAATCCGCA
CGCGCTACCACCTGCAAGACCCCCTCGACTACCGCAAATACAACCAGCTA
TGCGGATCCCTGCGCCAACTCGCGCACAAGTTGTCTGAGCTCGACCCCGA
GAGTGATCCCGTGCGCAAGAAGCTGGAATCCGAGGTGCTGGATAAGTTGT
TCCGCATGGGGATTCTGAAGCAGAGTCGCGAACAGGGGGCGGGACTTTCG
AGAGTCGAGAGGGAGGTTACGGTTAGTGCGTTTTGTAGGAGGAGGTTGGC
GGTTTGGATGACTAGGAGTGGGATGGTGGAGAATGTTAAGACTGCCGTCA
CGTTCATCGAGCAGGGCCATGTTCGCGTCGGGACAGAGGTCGTTACGGAT
CCGGCGTACTTGGTTACGAGAAATCTGGAGGATTTCGTGACATGGGTGGA
TAGCTCCAAGATTAAGAGGAGTATTATGCAGTATCGGGATAATTTGGATG
ATTTTGATATGTTGTGAATGCCCCGCGCCCTCAAGCATCACGAAAAGAAA
CTCCTCCGCAAAGTCGACTTCCACGTCTACAAATCCGACAACAACCACCG
GGAATCTCAAATCCGCACGCGCTACCACCTGCAAGACCCCCTCGACTACC
GCAAATACAACCAGCTATGCGGATCCCTGCGCCAACTCGCGCACAAGTTG
TCTGAGCTCGACCCCGAGAGTGATCCCGTGCGCAAGAAGCTGGAATCCGA
GGTGCTGGATAAGTTGTTCCGCATGGGGATTCTGAAGCAGAGTCGCGAAC
AGGGGGCGGGACTTTCGAGAGTCGAGAGGGAGGTTACGGTTAGTGCGTTT
TGTAGGAGGAGGTTGGCGGTTTGGATGACTAGGAGTGGGATGGTGGAGAA
TGTTAAGACTGCCGTCACGTTCATCGAGCAGGGCCATGTTCGCGTCGGGA
CAGAGGTCGTTACGGATCCGGCGTACTTGGTTACGAGAAATCTGGAGGAT
TTCGTGACATGGGTGGATAGCTCCAAGATTAAGAGGAGTATTATGCAGTA
TCGGGATAATTTGGATGATTTTGATATGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019843 | rRNA binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001912 |
| InterPro | IPR002942 |
| InterPro | IPR022801 |
| InterPro | IPR036986 |
| PFAM | PF01479 |
| PFAM | PF00163 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264Y0W |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:607611..608256 + |
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