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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:688021..688539+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010141-T1 ID=ATCC10864_010141-T1|Name=ATCC10864_010141-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=519bp|location=Sequence derived from alignment at MCQH01000231:688021..688539+ (Aspergillus niger ATCC 10864)
ATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAA
TGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTACGATAACCCGCTCTT
TTCCATTCACTATTCAAAGGAATAACACTGATGTTGGGGTTCCGGGATGA
ACAGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCC
CGACAGCAGCAACAACGTCGGTATCGCAAACAAGGTTCGCCGAGGAGACA
TCCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGAC
GGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTC
CGGAGACCCCATCGGAACAAGAATGAACGGTCAGTCTAGGCGTACAGACC
ACGGCATCACATGGAAAGGATTGGAACGTCTTTACTGACATATACTAGGT
GTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTT
GGCGCCGATGCATGTGTAG back to topCoding sequence (CDS) from alignment at MCQH01000231:688021..688539+ >ATCC10864_010141-T1 ID=ATCC10864_010141-T1|Name=ATCC10864_010141-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1134bp|location=Sequence derived from alignment at MCQH01000231:688021..688539+ (Aspergillus niger ATCC 10864)
ATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAA
TGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGCATCGTGGTCG
TGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAACAACGTCGGT
ATCGCAAACAAGGTTCGCCGAGGAGACATCCGCCATGCCGTCGTCGTCCG
CGCGGCCAAGGAAATGCAGCGTCCGGACGGTTCGATCGTCAAGTTCGATG
ATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGAACAAGA
ATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGAT
CCTGTCGTTGGCGCCGATGCATGTGTAGATGCTTAACTGCATCGACAACT
CCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCC
GCCACCGTTGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTT
CGGCCCCGACAGCAGCAACAACGTCGGTATCGCAAACAAGGTTCGCCGAG
GAGACATCCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGT
CCGGACGGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAA
CAAGTCCGGAGACCCCATCGGAACAAGAATGAACGGTGTCGTGGCTACGG
AACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCAT
GTGTAGATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTG
CGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGCATCG
TGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAACAAC
GTCGGTATCGCAAACAAGGTTCGCCGAGGAGACATCCGCCATGCCGTCGT
CGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGACGGTTCGATCGTCAAGT
TCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGA
ACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTC
GAAGATCCTGTCGTTGGCGCCGATGCATGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
| GO:0015934 | large ribosomal subunit |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000218 |
| InterPro | IPR019972 |
| PFAM | PF00238 |
| InterPro | IPR036853 |
| InterPro | IPR005745 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265HP0 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:688021..688539 + |
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