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ATCC10864_010142-T1, ATCC10864_010142-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010142-T1
Unique NameATCC10864_010142-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:688729..689426-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010142-T1 ID=ATCC10864_010142-T1|Name=ATCC10864_010142-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=698bp|location=Sequence derived from alignment at MCQH01000231:688729..689426- (Aspergillus niger ATCC 10864)
ATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGA
TCAAATTCACTTCCGATTCTGTCGTGAATGGTAAGTTTTGATCTCTACAC
TTTGGTCGGACCTTCTGCTAACGTCTACAGTTCCAACTTGCTCTACCCGA
AGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAACCTGCCAT
GTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTCAACAC
TCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTA
CGGTTTGTCTCCCGGGTTTCTGTGATCATTGTGGGGAAGAGATTACCTGC
TTCGTCTGTGACATATCCTCCGAGGACTCCTGGTCCGAAGAGGATTATGA
TGGCTTTTCGTCGTCATGAGGTCCTGCGAGCGCCGCGCTCGCGTCATGGA
TACATTCCAAGTTGTCTTGAAATTTCCGTGGCTAACCCACTCTTTCCCTA
GCTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAG
TCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGGTAAGCCTT
CATGCCGGTTTACACCGCATCCATGAAGGGATCGGCTGACGCTTACTTTC
CAGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000231:688729..689426-

>ATCC10864_010142-T1 ID=ATCC10864_010142-T1|Name=ATCC10864_010142-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1548bp|location=Sequence derived from alignment at MCQH01000231:688729..689426- (Aspergillus niger ATCC 10864)
AAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAACTTCC
TCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAGTCTTCT
TCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGTTCCAACTTGCTCTA
CCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAACCT
GCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTC
AACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGA
TCCTACGATGTCTGCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGC
CCACCGATCAAATTCACTTCCGATTCTGTCGTGAATGAAACTTTACTACG
TCTGTTGCGCGTGCGGCAATGTTTTCGTCTAACTTCCTCGTTCCAACAAG
CTCTGCCCGAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACA
GCGTTCCGCTGAAACGGGAATGTTCCAACTTGCTCTACCCGAAGGAAGAC
CGCATCAACAACCGGTTGATGTTCACCTGCCGAACCTGCCATGTCGGCGA
GCCCGCCACCTCCTACTGCGTCTATCAAAACAAACTCAACACTCAAGTCG
GAGATACCGCCGGTGTGACCCAGGATGTGGGATCTGATCCTACGATGTCT
GCCAGCCCATCCCCCTCTGCCGGTGGCGATAGCAAGCCCACCGATCAAAT
TCACTTCCGATTCTGTCGTGAATGAAACTTTACTACGTCTGTTGCGCGTG
CGGCAATGTTTTCGTCTAACTTCCTCGTTCCAACAAGCTCTGCCCGAGCT
GCGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAA
ACGGGAATGTTCCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACC
GGTTGATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCC
TACTGCGTCTATCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGG
TGTGACCCAGGATGTGGGATCTGATCCTACGATGTCTGCCAGCCCATCCC
CCTCTGCCGGTGGCGATAGCAAGCCCACCGATCAAATTCACTTCCGATTC
TGTCGTGAATGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTC
GTCTAACTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGA
AGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGTTCC
AACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCAC
CTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTATC
AAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGAT
GTGGGATCTGATCCTACGATGTCTGCCAGCCCATCCCCCTCTGCCGGTGG
CGATAGCAAGCCCACCGATCAAATTCACTTCCGATTCTGTCGTGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006379mRNA cleavage
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010142ATCC10864_010142Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010142-T1ATCC10864_010142-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010142-T1.cdsATCC10864_010142-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010142-T1.exon4ATCC10864_010142-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010142-T1.exon3ATCC10864_010142-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010142-T1.exon2ATCC10864_010142-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010142-T1.exon1ATCC10864_010142-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR034012
InterProIPR012164
InterProIPR001222
InterProIPR001529
PFAMPF02150
PFAMPF01096
Properties
Property NameValue
NoteBUSCO:EOG092654O3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:688729..689426 -
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