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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:844388..845387- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010202-T1 ID=ATCC10864_010202-T1|Name=ATCC10864_010202-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1000bp|location=Sequence derived from alignment at MCQH01000231:844388..845387- (Aspergillus niger ATCC 10864)
ATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAA
TGCGCTGCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTAC
GTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAG
CTCGGCAAAACCAGGTAGGTAGACTCATCGTTCAGCTTGCTTCAACAACA
CTAACTGATTCTTTTCTGCTGCAGCCTCATTGTCCGTATCTCAGCTGAAG
TCACAAAACCTCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCC
ATGGAGCTGACTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGGTATGG
ATATTCTCATCAAGCCGCGAGCGAGCAATAACTCAGCTGACCATTTCTGC
TTCAGACAAGGAGACTTTGAAACATATGTCACCAATGTCCTCGACCGTGT
CGTTCGCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGG
GTGTCAGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCGATTACGAT
GGCAATCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCA
TTTCCGCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACA
GACTCGATGAACGAGTTCCTGTCGCATTGAACATTACACATAAGCCGCTG
TCTGTTACTTTCCACACATTCGATGAAGGAAAACGGGTCATCATTGATGC
AACTCGGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTGATTGGCATCA
ACAACGCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTG
GACGCGATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAA
GGAGATCAATGCAATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAAC
GAGCGAAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGA
back to topCoding sequence (CDS) from alignment at MCQH01000231:844388..845387- >ATCC10864_010202-T1 ID=ATCC10864_010202-T1|Name=ATCC10864_010202-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2637bp|location=Sequence derived from alignment at MCQH01000231:844388..845387- (Aspergillus niger ATCC 10864)
ACAAGGAGACTTTGAAACATATGTCACCAATGTCCTCGACCGTGTCGTTC
GCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTATCCTCAAGGGTGTC
AGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCGATTACGATGGCAA
TCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGATTGCAGCATTTCC
GCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGATTGTGTACAGACTC
GATGAACGAGTTCCTGTCGCATTGAACATTACACATAAGCCGCTGTCTGT
TACTTTCCACACATTCGATGAAGGAAAACGGGTCATCATTGATGCAACTC
GGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTGATTGGCATCAACAAC
GCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCAGTGGACGC
GATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGTCAAGGAGA
TCAATGCAATCATTGATAAGGCGTTACAAGCCGATCTCTCGAAACGAGCG
AAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACGATCGGTGACCTCA
TTGTCCGTATCTCAGCTGAAGTCACAAAACCTCACGATGATCGTCCGTTC
GACGGTCTTTTCACAATCGCCATGGAGCTGACTGCCATGGGCTCCCCCGC
TTGGGACAATGGCCGATGAACAAAGAAGCATTGCTCTCCGTCACTGAGCG
CGACTTCATCCTCAATGCGCTGCGCGAGGATGTACGACTGGACGGTCGCG
GTTTCGACCAGCTACGTCCGCTGAATGTGTCATTCGGGGAGGAGTATGGA
CATGTGAAGGTGCAGCTCGGCAAAACCAGACAAGGAGACTTTGAAACATA
TGTCACCAATGTCCTCGACCGTGTCGTTCGCCATTCCAACGCCCTGGACA
CCGAGTCCCTCTGTATCCTCAAGGGTGTCAGCTGCTGGAGCATCCGCGCG
GACGTCCACGTTACCGATTACGATGGCAATCTGATTGATGCGGCTTGTAT
TGGTATCATGGCTGGATTGCAGCATTTCCGCCGTCAAGACGCTGTAGTCA
AGGATGGCCAGGTGATTGTGTACAGACTCGATGAACGAGTTCCTGTCGCA
TTGAACATTACACATAAGCCGCTGTCTGTTACTTTCCACACATTCGATGA
AGGAAAACGGGTCATCATTGATGCAACTCGGAAGGAGGAGCAAGCAGCGG
AAGCTGACGTCGTGATTGGCATCAACAACGCTGGTGATGTGTGCTTCGTC
TCCAAGTTCTCCGGATCGCCAGTGGACGCGATGGTCTTTGTGGATAAGAC
TTCCGTTGCCCTGGAGAAGGTCAAGGAGATCAATGCAATCATTGATAAGG
CGTTACAAGCCGATCTCTCGAAACGAGCGAAGATTGGCATGGCTGAGGAG
TCGCGGGCGGAAAACGATCGGTGACCTCATTGTCCGTATCTCAGCTGAAG
TCACAAAACCTCACGATGATCGTCCGTTCGACGGTCTTTTCACAATCGCC
ATGGAGCTGACTGCCATGGGCTCCCCCGCTTGGGACAATGGCCGATGAAC
AAAGAAGCATTGCTCTCCGTCACTGAGCGCGACTTCATCCTCAATGCGCT
GCGCGAGGATGTACGACTGGACGGTCGCGGTTTCGACCAGCTACGTCCGC
TGAATGTGTCATTCGGGGAGGAGTATGGACATGTGAAGGTGCAGCTCGGC
AAAACCAGACAAGGAGACTTTGAAACATATGTCACCAATGTCCTCGACCG
TGTCGTTCGCCATTCCAACGCCCTGGACACCGAGTCCCTCTGTATCCTCA
AGGGTGTCAGCTGCTGGAGCATCCGCGCGGACGTCCACGTTACCGATTAC
GATGGCAATCTGATTGATGCGGCTTGTATTGGTATCATGGCTGGATTGCA
GCATTTCCGCCGTCAAGACGCTGTAGTCAAGGATGGCCAGGTGATTGTGT
ACAGACTCGATGAACGAGTTCCTGTCGCATTGAACATTACACATAAGCCG
CTGTCTGTTACTTTCCACACATTCGATGAAGGAAAACGGGTCATCATTGA
TGCAACTCGGAAGGAGGAGCAAGCAGCGGAAGCTGACGTCGTGATTGGCA
TCAACAACGCTGGTGATGTGTGCTTCGTCTCCAAGTTCTCCGGATCGCCA
GTGGACGCGATGGTCTTTGTGGATAAGACTTCCGTTGCCCTGGAGAAGGT
CAAGGAGATCAATGCAATCATTGATAAGGCGTTACAAGCCGATCTCTCGA
AACGAGCGAAGATTGGCATGGCTGAGGAGTCGCGGGCGGAAAACGATCGG
TGACCTCATTGTCCGTATCTCAGCTGAAGTCACAAAACCTCACGATGATC
GTCCGTTCGACGGTCTTTTCACAATCGCCATGGAGCTGACTGCCATGGGC
TCCCCCGCTTGGGACAATGGCCGATGAACAAAGAAGCATTGCTCTCCGTC
ACTGAGCGCGACTTCATCCTCAATGCGCTGCGCGAGGATGTACGACTGGA
CGGTCGCGGTTTCGACCAGCTACGTCCGCTGAATGTGTCATTCGGGGAGG
AGTATGGACATGTGAAGGTGCAGCTCGGCAAAACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000178 | exosome (RNase complex) |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR027408 |
| PFAM | PF03725 |
| InterPro | IPR033100 |
| InterPro | IPR020568 |
| InterPro | IPR001247 |
| InterPro | IPR036345 |
| InterPro | IPR015847 |
| PFAM | PF01138 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264398 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:844388..845387 - |
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