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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:925104..925782- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010229-T1 ID=ATCC10864_010229-T1|Name=ATCC10864_010229-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=679bp|location=Sequence derived from alignment at MCQH01000231:925104..925782- (Aspergillus niger ATCC 10864)
ATGCCTGGCTCTCTCTCGCTTTTCTCCGTCAATGCCGTCCTTCTCATGTC
GGCCGACGATGGCTCTCGCATCTTCACCAAGTACTACTCCCCTCCTCACC
CCCCGGCCGGTGCTGCCCCCAACTCGACCGATTACCCCGGAGCGAACCCC
TACCCTACCGTGAAAGAGCAGAAGGCATTCGAACAAGGCCTCCTCGAAAA
GACCAACAAGCAGACCAGCGATGTGATCCTCTACGATAACCGGATAGTTG
TCTTCAAGATGGAGAGCGATGTGATGCTCTATGTGGTGGGAAGCGCCGAC
GAGAACGAAGTGCTGTTGTACAACGTGGTTCTGTCGCTAAGAGATGCTTT
GGGAATCCTATTCAAGTATGCATGGCTCCATAATATCCGCTGAATAGAGA
AGGGAAAACAGATCAATTGGGCTAACTCTGTTCCTCAGGGGCGCAACCGA
CAAGCGCACGATCGTCGAGAACTACGACCTGGTCGCCTTGGCCATCGATG
AGATTATCGACGATGGAATCATCCTGGAAACCGACCCTGTCTTGATCGCC
TCCCGCGTCAGTCGCGCTCCTGCTCCGGATGCACCGAACTTGAAGAGCAT
CGACCTGTCCGAACAAGGTCTGATGAATGCCTGGGAGCTTGGAAAGCGGC
GTCTGGCGGAGGGGTTGCGGCAGATGTAA back to topCoding sequence (CDS) from alignment at MCQH01000231:925104..925782- >ATCC10864_010229-T1 ID=ATCC10864_010229-T1|Name=ATCC10864_010229-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1212bp|location=Sequence derived from alignment at MCQH01000231:925104..925782- (Aspergillus niger ATCC 10864)
GGGCGCAACCGACAAGCGCACGATCGTCGAGAACTACGACCTGGTCGCCT
TGGCCATCGATGAGATTATCGACGATGGAATCATCCTGGAAACCGACCCT
GTCTTGATCGCCTCCCGCGTCAGTCGCGCTCCTGCTCCGGATGCACCGAA
CTTGAAGAGCATCGACCTGTCCGAACAAGGTCTGATGAATGCCTGGGAGC
TTGGAAAGCGGCGTCTGGCGGAGGGGTTGCGGCAGATGTAAATGCCTGGC
TCTCTCTCGCTTTTCTCCGTCAATGCCGTCCTTCTCATGTCGGCCGACGA
TGGCTCTCGCATCTTCACCAAGTACTACTCCCCTCCTCACCCCCCGGCCG
GTGCTGCCCCCAACTCGACCGATTACCCCGGAGCGAACCCCTACCCTACC
GTGAAAGAGCAGAAGGCATTCGAACAAGGCCTCCTCGAAAAGACCAACAA
GCAGACCAGCGATGTGATCCTCTACGATAACCGGATAGTTGTCTTCAAGA
TGGAGAGCGATGTGATGCTCTATGTGGTGGGAAGCGCCGACGAGAACGAA
GTGCTGTTGTACAACGTGGTTCTGTCGCTAAGAGATGCTTTGGGAATCCT
ATTCAAGGGCGCAACCGACAAGCGCACGATCGTCGAGAACTACGACCTGG
TCGCCTTGGCCATCGATGAGATTATCGACGATGGAATCATCCTGGAAACC
GACCCTGTCTTGATCGCCTCCCGCGTCAGTCGCGCTCCTGCTCCGGATGC
ACCGAACTTGAAGAGCATCGACCTGTCCGAACAAGGTCTGATGAATGCCT
GGGAGCTTGGAAAGCGGCGTCTGGCGGAGGGGTTGCGGCAGATGTAAATG
CCTGGCTCTCTCTCGCTTTTCTCCGTCAATGCCGTCCTTCTCATGTCGGC
CGACGATGGCTCTCGCATCTTCACCAAGTACTACTCCCCTCCTCACCCCC
CGGCCGGTGCTGCCCCCAACTCGACCGATTACCCCGGAGCGAACCCCTAC
CCTACCGTGAAAGAGCAGAAGGCATTCGAACAAGGCCTCCTCGAAAAGAC
CAACAAGCAGACCAGCGATGTGATCCTCTACGATAACCGGATAGTTGTCT
TCAAGATGGAGAGCGATGTGATGCTCTATGTGGTGGGAAGCGCCGACGAG
AACGAAGTGCTGTTGTACAACGTGGTTCTGTCGCTAAGAGATGCTTTGGG
AATCCTATTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030126 | COPI vesicle coat |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR011012 |
| InterPro | IPR022775 |
| InterPro | IPR039652 |
| PFAM | PF01217 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OBA |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:925104..925782 - |
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