You are here

Home

ATCC10864_010264-T1, ATCC10864_010264-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010264-T1
Unique NameATCC10864_010264-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1030886..1031901+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010264-T1 ID=ATCC10864_010264-T1|Name=ATCC10864_010264-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1016bp|location=Sequence derived from alignment at MCQH01000231:1030886..1031901+ (Aspergillus niger ATCC 10864)
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAACTACTTCGTTGAGAATGTTGCTTCCTGTGATTTTGCGGCTG
CGTCATCCGATGCCAAAAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCTGCTAAGACAGCTGGAGTAAAGCAT
GTATGCAGCCCAATTCTATAACTGGCAATATTAAGCTCTAATGAACCCTA
GGTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGG
CTCTAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTAC
GTTGCATCCTCTACCTCTACATGAATATTCCGACAGGCTCAACCAATGCT
AACTACATCAGGTCTGGTCTGACATTTACCTCTATTCGAGAAGGCATATA
CGCGGAATGCTTCACCGTCTTTCTTGACTGGTACCCCGACAGAACGACAG
TCACACTTCCAGCAGACGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTA
GGCGAAGCAACCGCGCGCATCATGATACGAGGTGGGTATGAGAATCAGAT
TGTTCTGTTCACTCCGGAGAAAACAATCACTGCCAAAGAAATAGTAGACA
TCATCAATGAGACTACTGGTCGACAGGTCAAGCTTAACGTGATCCCACGG
GAGAAGTACCTGCAATCGAGCAGTGTGGATGACCAGCGTGGCAAGCCGAA
GGAGCACTTTCAGATGATTGCAACAATATGGGACGAGATTTCAGGGGGGT
CCCTACGCACAACAAATCCGTTGATGCGCGAGATTCTCGGAAGAAAGCCT
ACCACACCTCAGGATGCTGTAAAGAAACTGTTGAAAGAAAATAGGGATTA
TGTGTTCATCTATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000231:1030886..1031901+

>ATCC10864_010264-T1 ID=ATCC10864_010264-T1|Name=ATCC10864_010264-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2700bp|location=Sequence derived from alignment at MCQH01000231:1030886..1031901+ (Aspergillus niger ATCC 10864)
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAACTACTTCGTTGAGAATGTTGCTTCCTGTGATTTTGCGGCTG
CGTCATCCGATGCCAAAAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCTGCTAAGACAGCTGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCTAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGACATTTACCTCTATTCGAGAAGGCATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACACTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGAAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACCTGCAAT
CGAGCAGTGTGGATGACCAGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACAATATGGGACGAGATTTCAGGGGGGTCCCTACGCACAACAAA
TCCGTTGATGCGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAACTACTTCGTTGAGAATGTTGCTTCCTGTGATTTTGCGGCTG
CGTCATCCGATGCCAAAAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCTGCTAAGACAGCTGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCTAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGACATTTACCTCTATTCGAGAAGGCATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACACTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGAAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACCTGCAAT
CGAGCAGTGTGGATGACCAGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACAATATGGGACGAGATTTCAGGGGGGTCCCTACGCACAACAAA
TCCGTTGATGCGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAACTACTTCGTTGAGAATGTTGCTTCCTGTGATTTTGCGGCTG
CGTCATCCGATGCCAAAAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCTGCTAAGACAGCTGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCTAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGACATTTACCTCTATTCGAGAAGGCATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACACTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGAAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACCTGCAAT
CGAGCAGTGTGGATGACCAGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACAATATGGGACGAGATTTCAGGGGGGTCCCTACGCACAACAAA
TCCGTTGATGCGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010264ATCC10864_010264Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010264-T1.exon1ATCC10864_010264-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010264-T1.exon2ATCC10864_010264-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010264-T1.exon3ATCC10864_010264-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010264-T1.cdsATCC10864_010264-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010264-T1ATCC10864_010264-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008030
InterProIPR036291
PFAMPF05368
PFAMPF13460
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1030886..1031901 +
Powered by Drupal