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ATCC10864_010313-T1, ATCC10864_010313-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010313-T1
Unique NameATCC10864_010313-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1172764..1174615+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010313-T1 ID=ATCC10864_010313-T1|Name=ATCC10864_010313-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1852bp|location=Sequence derived from alignment at MCQH01000231:1172764..1174615+ (Aspergillus niger ATCC 10864)
ATGCGTGCTCCTCCCTCCACCCATGTGAGGGATGCGGTAATTGGTCCCTT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGTAGGTGCTTCATATCCATA
TCTCTGCGGCGCAAGCTTATAAGTATCATCTCAAGGGTCCGGAGAGTCAA
GTGTGGACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTA
AATGCGAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCG
ACTCTTTCAATTCTCGACAAGCCCCTATCATCGGCACCGGATACAGTCTG
GAAGGAGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTA
TCGGCGGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATT
TGCCGCAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCT
GTTCGAAAGCCCGGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAG
ATGTCCTTCTCCTCAACCAGTACCACCGAGACGCCATCAGCTGGTATTCC
CGCTCAATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGT
CTTGGTCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCC
AGGGTGGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTC
ATTGTCACCTTGCGTGGTCAGATCGCTTCCGGGGTCGTATCGTCATCGAA
AGCTGCATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGG
CGACAGCGCTCAACTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGAT
GTTCAGCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGA
GGCAATTGTTCTCTTACTCACAGAGACTCAGCTTTTTCAGCGTGTTTGCC
TACCACATTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTC
AATCAACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTT
CACGGACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGC
AAATGAGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTA
ATGATCGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCT
TCTGCAATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCGT
CGGCTCGATCAGACGGTTCCCAACCTCCACTCACGCTTGAACTCGGTATC
TCAATACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCG
ACAAACAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCT
ATAAAGTGAATACTGGGGCAAGGTGGTCGCACACAATAATAACAATCGAA
GAAGTGTGTGCGGTAGCTATGAAGTCAACTGAAGGACTACCGGAGTCGAC
GAATCAACTCCAATACTCACATTGTGAAGACTCTGATATTAGCATATTCG
GTTCAGATCTTGGAAGTCAACCCAGCACTCCAGGACTGGAATTTGTGCCA
AGCCCATATTCGGTGGATTCGGATGTGGATGCCGGGACAGCAGTCACAGA
ACTCGTCCCTGAAGAGGCACGCATCAGACCCATAAACCTCTTCCGCGTCC
AAGACGGCTTCCCTCCGGGAACAACAGATGAAGAGATCGCAAGGTGGAGT
CCTTACCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCC
AATCAGTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATT
GA
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Coding sequence (CDS) from alignment at MCQH01000231:1172764..1174615+

>ATCC10864_010313-T1 ID=ATCC10864_010313-T1|Name=ATCC10864_010313-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3594bp|location=Sequence derived from alignment at MCQH01000231:1172764..1174615+ (Aspergillus niger ATCC 10864)
ATGCGTGCTCCTCCCTCCACCCATGTGAGGGATGCGGTAATTGGTCCCTT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGGTCCGGAGAGTCAAGTGTG
GACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAATGC
GAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACTCT
TTCAATTCTCGACAAGCCCCTATCATCGGCACCGGATACAGTCTGGAAGG
AGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGC
GGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCG
CAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCG
AAAGCCCGGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTC
CTTCTCCTCAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTC
AATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGG
TCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGT
GGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGT
CACCTTGCGTGGTCAGATCGCTTCCGGGGTCGTATCGTCATCGAAAGCTG
CATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACA
GCGCTCAACTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCA
GCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAA
TTGTTCTCTTACTCACAGAGACTCAGCTTTTTCAGCGTGTTTGCCTACCA
CATTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCA
ACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGG
ACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATG
AGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAATGAT
CGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGC
AATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCGTCGGCT
CGATCAGACGGTTCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAAT
ACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAA
CAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAA
GTGAATACTGGGGCAAGGTGGTCGCACACAATAATAACAATCGAAGAAGT
GTGTGCGGTAGCTATGAAGTCAACTGAAGGACTACCGGAGTCGACGAATC
AACTCCAATACTCACATTGTGAAGACTCTGATATTAGCATATTCGGTTCA
GATCTTGGAAGTCAACCCAGCACTCCAGGACTGGAATTTGTGCCAAGCCC
ATATTCGGTGGATTCGGATGTGGATGCCGGGACAGCAGTCACAGAACTCG
TCCCTGAAGAGGCACGCATCAGACCCATAAACCTCTTCCGCGTCCAAGAC
GGCTTCCCTCCGGGAACAACAGATGAAGAGATCGCAAGGTGGAGTCCTTA
CCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCA
GTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGAATG
CGTGCTCCTCCCTCCACCCATGTGAGGGATGCGGTAATTGGTCCCTTGAG
ATCGCGGCGGGGTTGCAAAACCTGCAAGGTCCGGAGAGTCAAGTGTGGAC
AGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAATGCGAG
TATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACTCTTTC
AATTCTCGACAAGCCCCTATCATCGGCACCGGATACAGTCTGGAAGGAGC
GTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGCGGG
GGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCGCAG
CGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCGAAA
GCCCGGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTCCTT
CTCCTCAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTCAAT
GTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGGTCG
GACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGTGGT
GCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGTCAC
CTTGCGTGGTCAGATCGCTTCCGGGGTCGTATCGTCATCGAAAGCTGCAT
GGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACAGCG
CTCAACTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCAGCA
TGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAATTG
TTCTCTTACTCACAGAGACTCAGCTTTTTCAGCGTGTTTGCCTACCACAT
TTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCAACG
ACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGGACT
TGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATGAGC
ACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAATGATCGG
AACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGCAAT
TCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCGTCGGCTCGA
TCAGACGGTTCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAATACC
CCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAACAG
CACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAAGTG
AATACTGGGGCAAGGTGGTCGCACACAATAATAACAATCGAAGAAGTGTG
TGCGGTAGCTATGAAGTCAACTGAAGGACTACCGGAGTCGACGAATCAAC
TCCAATACTCACATTGTGAAGACTCTGATATTAGCATATTCGGTTCAGAT
CTTGGAAGTCAACCCAGCACTCCAGGACTGGAATTTGTGCCAAGCCCATA
TTCGGTGGATTCGGATGTGGATGCCGGGACAGCAGTCACAGAACTCGTCC
CTGAAGAGGCACGCATCAGACCCATAAACCTCTTCCGCGTCCAAGACGGC
TTCCCTCCGGGAACAACAGATGAAGAGATCGCAAGGTGGAGTCCTTACCG
TGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCAGTG
GTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010313ATCC10864_010313Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010313-T1.exon1ATCC10864_010313-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010313-T1.exon2ATCC10864_010313-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010313-T1.cdsATCC10864_010313-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010313-T1ATCC10864_010313-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR021858
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1172764..1174615 +
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