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ATCC10864_010324-T1, ATCC10864_010324-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010324-T1
Unique NameATCC10864_010324-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1192045..1193763-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010324-T1 ID=ATCC10864_010324-T1|Name=ATCC10864_010324-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1719bp|location=Sequence derived from alignment at MCQH01000231:1192045..1193763- (Aspergillus niger ATCC 10864)
ATGGGTTCCGGGCGATTAGGCGGGTATGCCGCTGTCTTTGCGGGGTTAGT
GGTTAGTGTTTCTGCTATTGATTTTAATATCAACAGCACCGGTATGGGAC
TTCATCTGCTTCTGCGATTATCAGAAGACCCGCTAATGCAACGTTACCAG
ACACAATTAAATCCGCCTCCACCATTGAAATCACCAACCTCCTCAGCACC
GCCAACTTCAACGGCACTGTCAACCCCATCTACTCCTCCTCCTACCCAGA
GGGCATGCTCTACATGTCCCTAATCCCCTACTGGAACGCGACCGGCAACA
CAACCTACAACGACTTTATCATCTCGCGCATGCACAACCACTCCCAGAGC
ATATTCAGCGGCGAATGGGAGGAGATCGACGTCCTGACGAGCGACTTTGT
CACATGGGGTCTCGCCGCCATGGCTGCGTCAGAGGCGGACTTTCCGGGTA
GCCCGACGAACTCTTCTTGGCTGACTTGGGCGAAGAAAGTCGCGTATACG
ATGGAATTGGTTGTTAGTCAGGGCTCGATATGCAACGGCGGACTATATGA
CGATGAGAGTCAAACGCATGGGACGGAGTTCGATTGGTTCAACAACGGGG
CGTATTTCCAGCTTATTTCGAGAGTGGCGTATGCGAGTGAGGGAGACGAC
CAGGGGACGTATGCACAGTATGGGGCGAGTGCATGGTCATGGAGTGAGAA
AAATGGCATGGTGAATACCACGAATTGGTCGGTGTATGATTTGGTCTCCA
ATAAGACGGTGAATGCATCGACTTGTCAGGCTGTGGATACGGCGAGGTGG
AGTTTGGCGTATGGGTTTTATTTGAGTGGTGCGGCGTATATGTATGAAGC
GGTAAGCAGCACTATCCTCAATCGTCTAGGTTTAGAGATAGATCGTTGTG
GGATAATAGCTGACGACACAGCAGACCAAGTCGGACGTCTGGATGACGCG
AGCCGAAGGACTCCTCAACAGCACGCTTGACACATTCTTCCTCGACGACA
TCATGGTCGAAGTGGGCTATAGCAGTGCTAGTCTAGGCACTGCCGAGCAG
TCCAAGCTGTCTGCTTACCCGTTCAAGGGATTCCTGGCACTGTGCCTTGC
ATCCGTGGCAAACCTTATCCCGGAGTTCGCCGGTCGGATTGTGCCGCTCC
TGGCAGACACAGCTGTGGCGGTATCTGAGCAATGCGATGGAACAAGCAAC
CAGACCGTCTGTGGTTCCGACTGGGGGTCTACTTCGTATAACAAAGACCC
GTCCTTCGAGAATACTTGGAATGCCGCCAATATTTTCGCCTCGAAGCTGC
TTGCGCCGGAAATATCCGAGTCGGGAAATACTACGAGTAGCGGCAACTCC
ACAACAAGCAATACAGCAAGCAAAGATGGGAGTGGCATCTCGAATGGCGC
AATTGCTGGTGCCGTGGTTGGTGCGGTGGCAGGCGTGGCTTTGATTATTG
CGGCGGTCTTCTTCGGCCTGCGTCAAAGGAAGCAGAAGAGAATTCCGGTC
CCTACAAAGGAGCCAGATGAGATTGAGTATGCTAAGAAGGGCCCCGCAGA
ACTGGCGCAGGGGTCTTATGTCCCTGAGATGGATAATGGAGTGGTGACGG
AGCTGCCGGGGAAAGTGGATGGGGAGCAGTTGAAGTCGAGTGTTCCTCAC
GAAGTGGATTCAGCCCCTGTGTCCGAGCTTCCGGTCAGGGTTAACACAAT
GCGTTATGAACTGGAATGA
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Coding sequence (CDS) from alignment at MCQH01000231:1192045..1193763-

>ATCC10864_010324-T1 ID=ATCC10864_010324-T1|Name=ATCC10864_010324-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4761bp|location=Sequence derived from alignment at MCQH01000231:1192045..1193763- (Aspergillus niger ATCC 10864)
ACCAAGTCGGACGTCTGGATGACGCGAGCCGAAGGACTCCTCAACAGCAC
GCTTGACACATTCTTCCTCGACGACATCATGGTCGAAGTGGGCTATAGCA
GTGCTAGTCTAGGCACTGCCGAGCAGTCCAAGCTGTCTGCTTACCCGTTC
AAGGGATTCCTGGCACTGTGCCTTGCATCCGTGGCAAACCTTATCCCGGA
GTTCGCCGGTCGGATTGTGCCGCTCCTGGCAGACACAGCTGTGGCGGTAT
CTGAGCAATGCGATGGAACAAGCAACCAGACCGTCTGTGGTTCCGACTGG
GGGTCTACTTCGTATAACAAAGACCCGTCCTTCGAGAATACTTGGAATGC
CGCCAATATTTTCGCCTCGAAGCTGCTTGCGCCGGAAATATCCGAGTCGG
GAAATACTACGAGTAGCGGCAACTCCACAACAAGCAATACAGCAAGCAAA
GATGGGAGTGGCATCTCGAATGGCGCAATTGCTGGTGCCGTGGTTGGTGC
GGTGGCAGGCGTGGCTTTGATTATTGCGGCGGTCTTCTTCGGCCTGCGTC
AAAGGAAGCAGAAGAGAATTCCGGTCCCTACAAAGGAGCCAGATGAGATT
GAGTATGCTAAGAAGGGCCCCGCAGAACTGGCGCAGGGGTCTTATGTCCC
TGAGATGGATAATGGAGTGGTGACGGAGCTGCCGGGGAAAGTGGATGGGG
AGCAGTTGAAGTCGAGTGTTCCTCACGAAGTGGATTCAGCCCCTGTGTCC
GAGCTTCCGGTCAGGGTTAACACAATGCGTTATGAACTGGAATGAACACA
ATTAAATCCGCCTCCACCATTGAAATCACCAACCTCCTCAGCACCGCCAA
CTTCAACGGCACTGTCAACCCCATCTACTCCTCCTCCTACCCAGAGGGCA
TGCTCTACATGTCCCTAATCCCCTACTGGAACGCGACCGGCAACACAACC
TACAACGACTTTATCATCTCGCGCATGCACAACCACTCCCAGAGCATATT
CAGCGGCGAATGGGAGGAGATCGACGTCCTGACGAGCGACTTTGTCACAT
GGGGTCTCGCCGCCATGGCTGCGTCAGAGGCGGACTTTCCGGGTAGCCCG
ACGAACTCTTCTTGGCTGACTTGGGCGAAGAAAGTCGCGTATACGATGGA
ATTGGTTGTTAGTCAGGGCTCGATATGCAACGGCGGACTATATGACGATG
AGAGTCAAACGCATGGGACGGAGTTCGATTGGTTCAACAACGGGGCGTAT
TTCCAGCTTATTTCGAGAGTGGCGTATGCGAGTGAGGGAGACGACCAGGG
GACGTATGCACAGTATGGGGCGAGTGCATGGTCATGGAGTGAGAAAAATG
GCATGGTGAATACCACGAATTGGTCGGTGTATGATTTGGTCTCCAATAAG
ACGGTGAATGCATCGACTTGTCAGGCTGTGGATACGGCGAGGTGGAGTTT
GGCGTATGGGTTTTATTTGAGTGGTGCGGCGTATATGTATGAAGCGATGG
GTTCCGGGCGATTAGGCGGGTATGCCGCTGTCTTTGCGGGGTTAGTGGTT
AGTGTTTCTGCTATTGATTTTAATATCAACAGCACCGACCAAGTCGGACG
TCTGGATGACGCGAGCCGAAGGACTCCTCAACAGCACGCTTGACACATTC
TTCCTCGACGACATCATGGTCGAAGTGGGCTATAGCAGTGCTAGTCTAGG
CACTGCCGAGCAGTCCAAGCTGTCTGCTTACCCGTTCAAGGGATTCCTGG
CACTGTGCCTTGCATCCGTGGCAAACCTTATCCCGGAGTTCGCCGGTCGG
ATTGTGCCGCTCCTGGCAGACACAGCTGTGGCGGTATCTGAGCAATGCGA
TGGAACAAGCAACCAGACCGTCTGTGGTTCCGACTGGGGGTCTACTTCGT
ATAACAAAGACCCGTCCTTCGAGAATACTTGGAATGCCGCCAATATTTTC
GCCTCGAAGCTGCTTGCGCCGGAAATATCCGAGTCGGGAAATACTACGAG
TAGCGGCAACTCCACAACAAGCAATACAGCAAGCAAAGATGGGAGTGGCA
TCTCGAATGGCGCAATTGCTGGTGCCGTGGTTGGTGCGGTGGCAGGCGTG
GCTTTGATTATTGCGGCGGTCTTCTTCGGCCTGCGTCAAAGGAAGCAGAA
GAGAATTCCGGTCCCTACAAAGGAGCCAGATGAGATTGAGTATGCTAAGA
AGGGCCCCGCAGAACTGGCGCAGGGGTCTTATGTCCCTGAGATGGATAAT
GGAGTGGTGACGGAGCTGCCGGGGAAAGTGGATGGGGAGCAGTTGAAGTC
GAGTGTTCCTCACGAAGTGGATTCAGCCCCTGTGTCCGAGCTTCCGGTCA
GGGTTAACACAATGCGTTATGAACTGGAATGAACACAATTAAATCCGCCT
CCACCATTGAAATCACCAACCTCCTCAGCACCGCCAACTTCAACGGCACT
GTCAACCCCATCTACTCCTCCTCCTACCCAGAGGGCATGCTCTACATGTC
CCTAATCCCCTACTGGAACGCGACCGGCAACACAACCTACAACGACTTTA
TCATCTCGCGCATGCACAACCACTCCCAGAGCATATTCAGCGGCGAATGG
GAGGAGATCGACGTCCTGACGAGCGACTTTGTCACATGGGGTCTCGCCGC
CATGGCTGCGTCAGAGGCGGACTTTCCGGGTAGCCCGACGAACTCTTCTT
GGCTGACTTGGGCGAAGAAAGTCGCGTATACGATGGAATTGGTTGTTAGT
CAGGGCTCGATATGCAACGGCGGACTATATGACGATGAGAGTCAAACGCA
TGGGACGGAGTTCGATTGGTTCAACAACGGGGCGTATTTCCAGCTTATTT
CGAGAGTGGCGTATGCGAGTGAGGGAGACGACCAGGGGACGTATGCACAG
TATGGGGCGAGTGCATGGTCATGGAGTGAGAAAAATGGCATGGTGAATAC
CACGAATTGGTCGGTGTATGATTTGGTCTCCAATAAGACGGTGAATGCAT
CGACTTGTCAGGCTGTGGATACGGCGAGGTGGAGTTTGGCGTATGGGTTT
TATTTGAGTGGTGCGGCGTATATGTATGAAGCGATGGGTTCCGGGCGATT
AGGCGGGTATGCCGCTGTCTTTGCGGGGTTAGTGGTTAGTGTTTCTGCTA
TTGATTTTAATATCAACAGCACCGACCAAGTCGGACGTCTGGATGACGCG
AGCCGAAGGACTCCTCAACAGCACGCTTGACACATTCTTCCTCGACGACA
TCATGGTCGAAGTGGGCTATAGCAGTGCTAGTCTAGGCACTGCCGAGCAG
TCCAAGCTGTCTGCTTACCCGTTCAAGGGATTCCTGGCACTGTGCCTTGC
ATCCGTGGCAAACCTTATCCCGGAGTTCGCCGGTCGGATTGTGCCGCTCC
TGGCAGACACAGCTGTGGCGGTATCTGAGCAATGCGATGGAACAAGCAAC
CAGACCGTCTGTGGTTCCGACTGGGGGTCTACTTCGTATAACAAAGACCC
GTCCTTCGAGAATACTTGGAATGCCGCCAATATTTTCGCCTCGAAGCTGC
TTGCGCCGGAAATATCCGAGTCGGGAAATACTACGAGTAGCGGCAACTCC
ACAACAAGCAATACAGCAAGCAAAGATGGGAGTGGCATCTCGAATGGCGC
AATTGCTGGTGCCGTGGTTGGTGCGGTGGCAGGCGTGGCTTTGATTATTG
CGGCGGTCTTCTTCGGCCTGCGTCAAAGGAAGCAGAAGAGAATTCCGGTC
CCTACAAAGGAGCCAGATGAGATTGAGTATGCTAAGAAGGGCCCCGCAGA
ACTGGCGCAGGGGTCTTATGTCCCTGAGATGGATAATGGAGTGGTGACGG
AGCTGCCGGGGAAAGTGGATGGGGAGCAGTTGAAGTCGAGTGTTCCTCAC
GAAGTGGATTCAGCCCCTGTGTCCGAGCTTCCGGTCAGGGTTAACACAAT
GCGTTATGAACTGGAATGAACACAATTAAATCCGCCTCCACCATTGAAAT
CACCAACCTCCTCAGCACCGCCAACTTCAACGGCACTGTCAACCCCATCT
ACTCCTCCTCCTACCCAGAGGGCATGCTCTACATGTCCCTAATCCCCTAC
TGGAACGCGACCGGCAACACAACCTACAACGACTTTATCATCTCGCGCAT
GCACAACCACTCCCAGAGCATATTCAGCGGCGAATGGGAGGAGATCGACG
TCCTGACGAGCGACTTTGTCACATGGGGTCTCGCCGCCATGGCTGCGTCA
GAGGCGGACTTTCCGGGTAGCCCGACGAACTCTTCTTGGCTGACTTGGGC
GAAGAAAGTCGCGTATACGATGGAATTGGTTGTTAGTCAGGGCTCGATAT
GCAACGGCGGACTATATGACGATGAGAGTCAAACGCATGGGACGGAGTTC
GATTGGTTCAACAACGGGGCGTATTTCCAGCTTATTTCGAGAGTGGCGTA
TGCGAGTGAGGGAGACGACCAGGGGACGTATGCACAGTATGGGGCGAGTG
CATGGTCATGGAGTGAGAAAAATGGCATGGTGAATACCACGAATTGGTCG
GTGTATGATTTGGTCTCCAATAAGACGGTGAATGCATCGACTTGTCAGGC
TGTGGATACGGCGAGGTGGAGTTTGGCGTATGGGTTTTATTTGAGTGGTG
CGGCGTATATGTATGAAGCGATGGGTTCCGGGCGATTAGGCGGGTATGCC
GCTGTCTTTGCGGGGTTAGTGGTTAGTGTTTCTGCTATTGATTTTAATAT
CAACAGCACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010324ATCC10864_010324Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010324-T1ATCC10864_010324-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010324-T1.cdsATCC10864_010324-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010324-T1.exon3ATCC10864_010324-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010324-T1.exon2ATCC10864_010324-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010324-T1.exon1ATCC10864_010324-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteCAZy:GH76
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1192045..1193763 -
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