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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:1357781..1358620+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010382-T1 ID=ATCC10864_010382-T1|Name=ATCC10864_010382-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=840bp|location=Sequence derived from alignment at MCQH01000231:1357781..1358620+ (Aspergillus niger ATCC 10864)
ATGTCATCTCCTCTGGTTCTCCTTCCCGGGGACGAGATCCCCTCAGAATA
CCTCCCATCCACCAATTCCGCACCATTGAGACTTGGCCCCGGTCTCCGTC
TACTTTCGCAACCGCCTTCTTCTTCCCCTCAAGCATCATCCTCCCCCAGC
CATGTCCTCACAGCCACACAAGCCGGCATTCTCTCTACAGACACCAAGCG
GAATGCTGTATCTATCCTCTCCACTCCGAATCGCCGCTATATCCCTACCG
TCAATGACCTGGTCATCGCACAGGTCCACCACTCCAGTGTGGATTACTTT
CACTGCATGATCACTCCGCAAGCGCCCCATGCAGTACTAGGACAACTGTC
TTTTGAAGGCGCGACGAAGAAGACCCGTCCTATGCTGAAACAAGGAGATT
TGGTTTACGCGCGTGTGCTTTCGGTCGGCCTGGGTGCGGGCGCGGAGGTT
GAGCTGGCCTGTGTGAACCCTGCGACGGGCAAGGCTGAACCTGGAGGACT
CGGTCAATTGAACGGGGGAATGGTGTTTGATATCTCTACTGGAATGGCTG
CGAGGCTGATGAGGGCCAGCTCATCTTCTTCTGAATCACAGGAGGGTGTG
GCCGGGTTGGTGGTGTTGGACGAACTGGGCAAGAAGCTGGAGAAATCGGG
CGGCTTCGAGATCGCCGTGGGAAGGAATGGTAAAGTCTGGGTCGACTGTT
CTAGTGGAGGTGAAACTTCGGTCAAGGCGACGGTAGCTGTTGGACGGTGT
CTGACTACGATCGATGAGCATGATTTGAGCCCGGCGGATCAGAAGAAGTT
GGTGTCGAGGATATTGCGCGAGATGAAGATTGAGGTATAG back to topCoding sequence (CDS) from alignment at MCQH01000231:1357781..1358620+ >ATCC10864_010382-T1 ID=ATCC10864_010382-T1|Name=ATCC10864_010382-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=840bp|location=Sequence derived from alignment at MCQH01000231:1357781..1358620+ (Aspergillus niger ATCC 10864)
ATGTCATCTCCTCTGGTTCTCCTTCCCGGGGACGAGATCCCCTCAGAATA
CCTCCCATCCACCAATTCCGCACCATTGAGACTTGGCCCCGGTCTCCGTC
TACTTTCGCAACCGCCTTCTTCTTCCCCTCAAGCATCATCCTCCCCCAGC
CATGTCCTCACAGCCACACAAGCCGGCATTCTCTCTACAGACACCAAGCG
GAATGCTGTATCTATCCTCTCCACTCCGAATCGCCGCTATATCCCTACCG
TCAATGACCTGGTCATCGCACAGGTCCACCACTCCAGTGTGGATTACTTT
CACTGCATGATCACTCCGCAAGCGCCCCATGCAGTACTAGGACAACTGTC
TTTTGAAGGCGCGACGAAGAAGACCCGTCCTATGCTGAAACAAGGAGATT
TGGTTTACGCGCGTGTGCTTTCGGTCGGCCTGGGTGCGGGCGCGGAGGTT
GAGCTGGCCTGTGTGAACCCTGCGACGGGCAAGGCTGAACCTGGAGGACT
CGGTCAATTGAACGGGGGAATGGTGTTTGATATCTCTACTGGAATGGCTG
CGAGGCTGATGAGGGCCAGCTCATCTTCTTCTGAATCACAGGAGGGTGTG
GCCGGGTTGGTGGTGTTGGACGAACTGGGCAAGAAGCTGGAGAAATCGGG
CGGCTTCGAGATCGCCGTGGGAAGGAATGGTAAAGTCTGGGTCGACTGTT
CTAGTGGAGGTGAAACTTCGGTCAAGGCGACGGTAGCTGTTGGACGGTGT
CTGACTACGATCGATGAGCATGATTTGAGCCCGGCGGATCAGAAGAAGTT
GGTGTCGAGGATATTGCGCGAGATGAAGATTGAGGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000178 | exosome (RNase complex) |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF15985 |
| PFAM | PF18311 |
| InterPro | IPR012340 |
| InterPro | IPR041054 |
| InterPro | IPR004088 |
| InterPro | IPR026699 |
| InterPro | IPR036612 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XJC |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:1357781..1358620 + |
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