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ATCC10864_010394-T1, ATCC10864_010394-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010394-T1
Unique NameATCC10864_010394-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1395875..1396617+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010394-T1 ID=ATCC10864_010394-T1|Name=ATCC10864_010394-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=743bp|location=Sequence derived from alignment at MCQH01000231:1395875..1396617+ (Aspergillus niger ATCC 10864)
ATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAGAACCA GAACATGCCAAAACTCCCCAAACGTTAGCTTTCCTTCCTCCGCCTCTTTT CACGCGACAACCCCCACTAACCCTGCTACGCAATGTAGATGTGAAAGTCC AAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCCATACTCAGGCTCC TCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCCCCACAATGGGCGT TGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGG CAAAATTGCTCAGCGGAAATAACAAGGGAAAGAAGGGCGACCGAAGGAAT CAGTTCGCGCAGTTGGCGCGAAGTAACGAGGCGTTGAAGAAGGAGGAGGT GTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGA AGTGGTTTGAGGCGAGGGGAGAGGAGTATACTGTGAGCGTGAAGACGGGG AGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAA GGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGC TGAAGGGTGAGTATGGGGAGTTAACCAAGTCGGCGATGCGGAAGAGAAAG AGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGAC GAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTGAAGTGA
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Coding sequence (CDS) from alignment at MCQH01000231:1395875..1396617+

>ATCC10864_010394-T1 ID=ATCC10864_010394-T1|Name=ATCC10864_010394-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1356bp|location=Sequence derived from alignment at MCQH01000231:1395875..1396617+ (Aspergillus niger ATCC 10864)
ATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAGAACCA
GAACATGCCAAAACTCCCCAAACATGTGAAAGTCCAAAAGCGCCCGATCC
CACATCCATCCACTCCCTCCCCATACTCAGGCTCCTCGTCACCCAAAACC
ATCTACGTTTCATCCAGCTCCCCCACAATGGGCGTTGTCAAGCGCGTCCA
GAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGGCAAAATTGCTCAGCG
GAAATAACAAGGGAAAGAAGGGCGACCGAAGGAATCAGTTCGCGCAGTTG
GCGCGAAGTAACGAGGCGTTGAAGAAGGAGGAGGTGTTTGTGAAGGCCAC
GGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGAAGTGGTTTGAGGCGA
GGGGAGAGGAGTATACTGTGAGCGTGAAGACGGGGAGTGTCCTTGTGGTT
GACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAAGGCGGTAGAGGAGAG
CGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGCTGAAGGGTGAGTATG
GGGAGTTAACCAAGTCGGCGATGCGGAAGAGAAAGAGGGCTGTTGCGCGG
TTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGACGAGGTGGGTGAATAT
GGTGGAGGTGGCAGTTTCATTGAAGTGAATGACACCTGCTCCATTAACCA
AAACACTCGAATTCGAGAAAAAGAACCAGAACATGCCAAAACTCCCCAAA
CATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCC
ATACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCC
CCACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAG
AACCGCGCCACGGCAAAATTGCTCAGCGGAAATAACAAGGGAAAGAAGGG
CGACCGAAGGAATCAGTTCGCGCAGTTGGCGCGAAGTAACGAGGCGTTGA
AGAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCA
TTGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGAGTATACTGTGAG
CGTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAG
AAGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTT
GAGGAAGCAAAGCTGAAGGGTGAGTATGGGGAGTTAACCAAGTCGGCGAT
GCGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGC
CGGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTG
AAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0000172ribonuclease MRP complex
GO:0005655nucleolar ribonuclease P complex
Vocabulary: Biological Process
TermDefinition
GO:0001682tRNA 5'-leader removal
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010394ATCC10864_010394Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010394-T1.exon1ATCC10864_010394-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010394-T1.exon2ATCC10864_010394-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010394-T1.cdsATCC10864_010394-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010394-T1ATCC10864_010394-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020241
InterProIPR036882
InterProIPR014612
PFAMPF12328
PFAMPF01918
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1395875..1396617 +