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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000231:1409040..1410819- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010401-T1 ID=ATCC10864_010401-T1|Name=ATCC10864_010401-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1780bp|location=Sequence derived from alignment at MCQH01000231:1409040..1410819- (Aspergillus niger ATCC 10864)
ATGCAAGGCCTAAAGCAGCATCTTACTCTATTTAGGAAGCTCACACTAAA
GCTCCTATGTGCTGCAATCTGCTTTGGCTTATCGGGCGCTGCCCGGGGTC
CGTTGTCCCCCTCCCTTTCCCTGCGTCCTGGCGAACTGACTCTTTATAGG
TCTTGATTCTGGGCTTATCGCCAGCACTGTTGCGGAACGGTCGTTCGTTG
ACCAATTTCATCTAGAGGCCAATTATCTCAGTGCGTCCCAGAAAGCCAAT
CGCTTGTCGAATATCACCTCTATGGTCCACATAGGCAGTCTACCGGGGGC
TATAGTCGCATTCTTGTGCAGCGAGCGCATCGGAATCCTTTGGACCTTCC
GTCAATGTTGCTTGATGTGGATCATTGGTTCTGTGGTGTTTATCACATCC
CGTGACCTTGGGCAGGTATATGCCGGTCGCTTTATAATGGGTCTTGGTAT
TGGACAGTTTGGTGTGATGGCCCCGATCTACCTCGGGGAGGTGGCACCCA
GGGAAATTCGCGGGATGCTTGTGGGTTTATACGGCATGTCAGAATATCTA
GGAATTATGATCGGGGTGAGCATAATTTAAAAGCCGTAAAAGAACTACGT
GGCTCAGCTTGCTGATCTTATGCAGTACTTCTCAATATGGGGAGCGTCCA
TTCACATCCCCAACTCGAGTGCCAAACAGTGGGTCATCCCACAAAGCGTT
CAGATTATGTGGGCAGGCCTGCTGCTGATCGCTTCCATGTTTTGTGAGGA
GAGTCCTCGCTTTCTATGTCGAAAGGACCGTCCTCAGGCAGCACTCCAGT
CTCTTGCACGACTATGGAATGTGTCCCCACTGGATCCGGGGATTCATGTG
GAGGTCTCGAATGTCAAAATTCAGCTCAAACTTGAGCGCGAGGTAGCATC
ACGATCAGGCCTTATTGGGGTGCTGAAAGAGCTGTTTGGAACAAAGTCCC
ACTTGAAACGGATCGCTTTCGTGTTTGTCCTGCAGTGTTTGGGCGAGTGG
TCCGGTCCAAACTCAGTGACTAGTAAGTCTCAGCCTCGGAATCAACAGTA
TGCACCCTTGGGCTAATCTGCCGTACACTAGCATATGCCCCCGAGTTATT
CGGACTCTTCGGTATCCATGGACAGTCGCAAAAGCTTTTCACAACGGCGG
TTTTTGGTGCTGTCAAGTTTGTATTTGCGCTGATTTCGGCAGTCTTCTTT
ATAGATTATTTGGGCAGGAGAAAGACATTATATATCGGTCTCGTGCTCCA
AGTTATCGCCCTGACCTATGATTCGATCTTCCTCACAATATTTAGCTCTC
TATCTGGCCAGTCGCAAGATGACCCAGCAGTAAGGCATGCGGCAATCGGC
GCGATTGTGATGATTTACTTCATCGGCATTGGATGGGCCTTGGGCTGGAA
TTCAATCCAGTATTTGATCACCGCTGAATCCTTCCCCCTCGGGGTTCGGA
TAGCAGGGGTCACTCTCGTTACACTGTGGCACTACGCCAACCGGATCGGC
ATTTCCAAAGTTGGTTCCCTGTGTATCCTTGGCGCAGATTGACTGCCGGA
TGATATTGACTAGAATTCCCTCTTAGGCAACCACATTGATGCTGCTCGAT
CACGACTCTCTAACACCCAAGGGTACTTTCTGGTTTTTCACTGGGATGTC
CTTGCTGGGTCTCCTATTCACATGGTGTTTCCTGCCCGAAACTGCCGGTA
AGGGGCTGGAAGAGACGAATGAGCTGTATACGGGGGATCGGAGTGGCACA
ACCCCGCATGACCAAAGAAATGCTGATTAG back to topCoding sequence (CDS) from alignment at MCQH01000231:1409040..1410819- >ATCC10864_010401-T1 ID=ATCC10864_010401-T1|Name=ATCC10864_010401-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7710bp|location=Sequence derived from alignment at MCQH01000231:1409040..1410819- (Aspergillus niger ATCC 10864)
GCAACCACATTGATGCTGCTCGATCACGACTCTCTAACACCCAAGGGTAC
TTTCTGGTTTTTCACTGGGATGTCCTTGCTGGGTCTCCTATTCACATGGT
GTTTCCTGCCCGAAACTGCCGGTAAGGGGCTGGAAGAGACGAATGAGCTG
TATACGGGGGATCGGAGTGGCACAACCCCGCATGACCAAAGAAATGCTGA
TTAGCATATGCCCCCGAGTTATTCGGACTCTTCGGTATCCATGGACAGTC
GCAAAAGCTTTTCACAACGGCGGTTTTTGGTGCTGTCAAGTTTGTATTTG
CGCTGATTTCGGCAGTCTTCTTTATAGATTATTTGGGCAGGAGAAAGACA
TTATATATCGGTCTCGTGCTCCAAGTTATCGCCCTGACCTATGATTCGAT
CTTCCTCACAATATTTAGCTCTCTATCTGGCCAGTCGCAAGATGACCCAG
CAGTAAGGCATGCGGCAATCGGCGCGATTGTGATGATTTACTTCATCGGC
ATTGGATGGGCCTTGGGCTGGAATTCAATCCAGTATTTGATCACCGCTGA
ATCCTTCCCCCTCGGGGTTCGGATAGCAGGGGTCACTCTCGTTACACTGT
GGCACTACGCCAACCGGATCGGCATTTCCAAATACTTCTCAATATGGGGA
GCGTCCATTCACATCCCCAACTCGAGTGCCAAACAGTGGGTCATCCCACA
AAGCGTTCAGATTATGTGGGCAGGCCTGCTGCTGATCGCTTCCATGTTTT
GTGAGGAGAGTCCTCGCTTTCTATGTCGAAAGGACCGTCCTCAGGCAGCA
CTCCAGTCTCTTGCACGACTATGGAATGTGTCCCCACTGGATCCGGGGAT
TCATGTGGAGGTCTCGAATGTCAAAATTCAGCTCAAACTTGAGCGCGAGG
TAGCATCACGATCAGGCCTTATTGGGGTGCTGAAAGAGCTGTTTGGAACA
AAGTCCCACTTGAAACGGATCGCTTTCGTGTTTGTCCTGCAGTGTTTGGG
CGAGTGGTCCGGTCCAAACTCAGTGACTAGTCTTGATTCTGGGCTTATCG
CCAGCACTGTTGCGGAACGGTCGTTCGTTGACCAATTTCATCTAGAGGCC
AATTATCTCAGTGCGTCCCAGAAAGCCAATCGCTTGTCGAATATCACCTC
TATGGTCCACATAGGCAGTCTACCGGGGGCTATAGTCGCATTCTTGTGCA
GCGAGCGCATCGGAATCCTTTGGACCTTCCGTCAATGTTGCTTGATGTGG
ATCATTGGTTCTGTGGTGTTTATCACATCCCGTGACCTTGGGCAGGTATA
TGCCGGTCGCTTTATAATGGGTCTTGGTATTGGACAGTTTGGTGTGATGG
CCCCGATCTACCTCGGGGAGGTGGCACCCAGGGAAATTCGCGGGATGCTT
GTGGGTTTATACGGCATGTCAGAATATCTAGGAATTATGATCGGGATGCA
AGGCCTAAAGCAGCATCTTACTCTATTTAGGAAGCTCACACTAAAGCTCC
TATGTGCTGCAATCTGCTTTGGCTTATCGGGCGCTGCCCGGGGCAACCAC
ATTGATGCTGCTCGATCACGACTCTCTAACACCCAAGGGTACTTTCTGGT
TTTTCACTGGGATGTCCTTGCTGGGTCTCCTATTCACATGGTGTTTCCTG
CCCGAAACTGCCGGTAAGGGGCTGGAAGAGACGAATGAGCTGTATACGGG
GGATCGGAGTGGCACAACCCCGCATGACCAAAGAAATGCTGATTAGCATA
TGCCCCCGAGTTATTCGGACTCTTCGGTATCCATGGACAGTCGCAAAAGC
TTTTCACAACGGCGGTTTTTGGTGCTGTCAAGTTTGTATTTGCGCTGATT
TCGGCAGTCTTCTTTATAGATTATTTGGGCAGGAGAAAGACATTATATAT
CGGTCTCGTGCTCCAAGTTATCGCCCTGACCTATGATTCGATCTTCCTCA
CAATATTTAGCTCTCTATCTGGCCAGTCGCAAGATGACCCAGCAGTAAGG
CATGCGGCAATCGGCGCGATTGTGATGATTTACTTCATCGGCATTGGATG
GGCCTTGGGCTGGAATTCAATCCAGTATTTGATCACCGCTGAATCCTTCC
CCCTCGGGGTTCGGATAGCAGGGGTCACTCTCGTTACACTGTGGCACTAC
GCCAACCGGATCGGCATTTCCAAATACTTCTCAATATGGGGAGCGTCCAT
TCACATCCCCAACTCGAGTGCCAAACAGTGGGTCATCCCACAAAGCGTTC
AGATTATGTGGGCAGGCCTGCTGCTGATCGCTTCCATGTTTTGTGAGGAG
AGTCCTCGCTTTCTATGTCGAAAGGACCGTCCTCAGGCAGCACTCCAGTC
TCTTGCACGACTATGGAATGTGTCCCCACTGGATCCGGGGATTCATGTGG
AGGTCTCGAATGTCAAAATTCAGCTCAAACTTGAGCGCGAGGTAGCATCA
CGATCAGGCCTTATTGGGGTGCTGAAAGAGCTGTTTGGAACAAAGTCCCA
CTTGAAACGGATCGCTTTCGTGTTTGTCCTGCAGTGTTTGGGCGAGTGGT
CCGGTCCAAACTCAGTGACTAGTCTTGATTCTGGGCTTATCGCCAGCACT
GTTGCGGAACGGTCGTTCGTTGACCAATTTCATCTAGAGGCCAATTATCT
CAGTGCGTCCCAGAAAGCCAATCGCTTGTCGAATATCACCTCTATGGTCC
ACATAGGCAGTCTACCGGGGGCTATAGTCGCATTCTTGTGCAGCGAGCGC
ATCGGAATCCTTTGGACCTTCCGTCAATGTTGCTTGATGTGGATCATTGG
TTCTGTGGTGTTTATCACATCCCGTGACCTTGGGCAGGTATATGCCGGTC
GCTTTATAATGGGTCTTGGTATTGGACAGTTTGGTGTGATGGCCCCGATC
TACCTCGGGGAGGTGGCACCCAGGGAAATTCGCGGGATGCTTGTGGGTTT
ATACGGCATGTCAGAATATCTAGGAATTATGATCGGGATGCAAGGCCTAA
AGCAGCATCTTACTCTATTTAGGAAGCTCACACTAAAGCTCCTATGTGCT
GCAATCTGCTTTGGCTTATCGGGCGCTGCCCGGGGCAACCACATTGATGC
TGCTCGATCACGACTCTCTAACACCCAAGGGTACTTTCTGGTTTTTCACT
GGGATGTCCTTGCTGGGTCTCCTATTCACATGGTGTTTCCTGCCCGAAAC
TGCCGGTAAGGGGCTGGAAGAGACGAATGAGCTGTATACGGGGGATCGGA
GTGGCACAACCCCGCATGACCAAAGAAATGCTGATTAGCATATGCCCCCG
AGTTATTCGGACTCTTCGGTATCCATGGACAGTCGCAAAAGCTTTTCACA
ACGGCGGTTTTTGGTGCTGTCAAGTTTGTATTTGCGCTGATTTCGGCAGT
CTTCTTTATAGATTATTTGGGCAGGAGAAAGACATTATATATCGGTCTCG
TGCTCCAAGTTATCGCCCTGACCTATGATTCGATCTTCCTCACAATATTT
AGCTCTCTATCTGGCCAGTCGCAAGATGACCCAGCAGTAAGGCATGCGGC
AATCGGCGCGATTGTGATGATTTACTTCATCGGCATTGGATGGGCCTTGG
GCTGGAATTCAATCCAGTATTTGATCACCGCTGAATCCTTCCCCCTCGGG
GTTCGGATAGCAGGGGTCACTCTCGTTACACTGTGGCACTACGCCAACCG
GATCGGCATTTCCAAATACTTCTCAATATGGGGAGCGTCCATTCACATCC
CCAACTCGAGTGCCAAACAGTGGGTCATCCCACAAAGCGTTCAGATTATG
TGGGCAGGCCTGCTGCTGATCGCTTCCATGTTTTGTGAGGAGAGTCCTCG
CTTTCTATGTCGAAAGGACCGTCCTCAGGCAGCACTCCAGTCTCTTGCAC
GACTATGGAATGTGTCCCCACTGGATCCGGGGATTCATGTGGAGGTCTCG
AATGTCAAAATTCAGCTCAAACTTGAGCGCGAGGTAGCATCACGATCAGG
CCTTATTGGGGTGCTGAAAGAGCTGTTTGGAACAAAGTCCCACTTGAAAC
GGATCGCTTTCGTGTTTGTCCTGCAGTGTTTGGGCGAGTGGTCCGGTCCA
AACTCAGTGACTAGTCTTGATTCTGGGCTTATCGCCAGCACTGTTGCGGA
ACGGTCGTTCGTTGACCAATTTCATCTAGAGGCCAATTATCTCAGTGCGT
CCCAGAAAGCCAATCGCTTGTCGAATATCACCTCTATGGTCCACATAGGC
AGTCTACCGGGGGCTATAGTCGCATTCTTGTGCAGCGAGCGCATCGGAAT
CCTTTGGACCTTCCGTCAATGTTGCTTGATGTGGATCATTGGTTCTGTGG
TGTTTATCACATCCCGTGACCTTGGGCAGGTATATGCCGGTCGCTTTATA
ATGGGTCTTGGTATTGGACAGTTTGGTGTGATGGCCCCGATCTACCTCGG
GGAGGTGGCACCCAGGGAAATTCGCGGGATGCTTGTGGGTTTATACGGCA
TGTCAGAATATCTAGGAATTATGATCGGGATGCAAGGCCTAAAGCAGCAT
CTTACTCTATTTAGGAAGCTCACACTAAAGCTCCTATGTGCTGCAATCTG
CTTTGGCTTATCGGGCGCTGCCCGGGGCAACCACATTGATGCTGCTCGAT
CACGACTCTCTAACACCCAAGGGTACTTTCTGGTTTTTCACTGGGATGTC
CTTGCTGGGTCTCCTATTCACATGGTGTTTCCTGCCCGAAACTGCCGGTA
AGGGGCTGGAAGAGACGAATGAGCTGTATACGGGGGATCGGAGTGGCACA
ACCCCGCATGACCAAAGAAATGCTGATTAGCATATGCCCCCGAGTTATTC
GGACTCTTCGGTATCCATGGACAGTCGCAAAAGCTTTTCACAACGGCGGT
TTTTGGTGCTGTCAAGTTTGTATTTGCGCTGATTTCGGCAGTCTTCTTTA
TAGATTATTTGGGCAGGAGAAAGACATTATATATCGGTCTCGTGCTCCAA
GTTATCGCCCTGACCTATGATTCGATCTTCCTCACAATATTTAGCTCTCT
ATCTGGCCAGTCGCAAGATGACCCAGCAGTAAGGCATGCGGCAATCGGCG
CGATTGTGATGATTTACTTCATCGGCATTGGATGGGCCTTGGGCTGGAAT
TCAATCCAGTATTTGATCACCGCTGAATCCTTCCCCCTCGGGGTTCGGAT
AGCAGGGGTCACTCTCGTTACACTGTGGCACTACGCCAACCGGATCGGCA
TTTCCAAATACTTCTCAATATGGGGAGCGTCCATTCACATCCCCAACTCG
AGTGCCAAACAGTGGGTCATCCCACAAAGCGTTCAGATTATGTGGGCAGG
CCTGCTGCTGATCGCTTCCATGTTTTGTGAGGAGAGTCCTCGCTTTCTAT
GTCGAAAGGACCGTCCTCAGGCAGCACTCCAGTCTCTTGCACGACTATGG
AATGTGTCCCCACTGGATCCGGGGATTCATGTGGAGGTCTCGAATGTCAA
AATTCAGCTCAAACTTGAGCGCGAGGTAGCATCACGATCAGGCCTTATTG
GGGTGCTGAAAGAGCTGTTTGGAACAAAGTCCCACTTGAAACGGATCGCT
TTCGTGTTTGTCCTGCAGTGTTTGGGCGAGTGGTCCGGTCCAAACTCAGT
GACTAGTCTTGATTCTGGGCTTATCGCCAGCACTGTTGCGGAACGGTCGT
TCGTTGACCAATTTCATCTAGAGGCCAATTATCTCAGTGCGTCCCAGAAA
GCCAATCGCTTGTCGAATATCACCTCTATGGTCCACATAGGCAGTCTACC
GGGGGCTATAGTCGCATTCTTGTGCAGCGAGCGCATCGGAATCCTTTGGA
CCTTCCGTCAATGTTGCTTGATGTGGATCATTGGTTCTGTGGTGTTTATC
ACATCCCGTGACCTTGGGCAGGTATATGCCGGTCGCTTTATAATGGGTCT
TGGTATTGGACAGTTTGGTGTGATGGCCCCGATCTACCTCGGGGAGGTGG
CACCCAGGGAAATTCGCGGGATGCTTGTGGGTTTATACGGCATGTCAGAA
TATCTAGGAATTATGATCGGGATGCAAGGCCTAAAGCAGCATCTTACTCT
ATTTAGGAAGCTCACACTAAAGCTCCTATGTGCTGCAATCTGCTTTGGCT
TATCGGGCGCTGCCCGGGGCAACCACATTGATGCTGCTCGATCACGACTC
TCTAACACCCAAGGGTACTTTCTGGTTTTTCACTGGGATGTCCTTGCTGG
GTCTCCTATTCACATGGTGTTTCCTGCCCGAAACTGCCGGTAAGGGGCTG
GAAGAGACGAATGAGCTGTATACGGGGGATCGGAGTGGCACAACCCCGCA
TGACCAAAGAAATGCTGATTAGCATATGCCCCCGAGTTATTCGGACTCTT
CGGTATCCATGGACAGTCGCAAAAGCTTTTCACAACGGCGGTTTTTGGTG
CTGTCAAGTTTGTATTTGCGCTGATTTCGGCAGTCTTCTTTATAGATTAT
TTGGGCAGGAGAAAGACATTATATATCGGTCTCGTGCTCCAAGTTATCGC
CCTGACCTATGATTCGATCTTCCTCACAATATTTAGCTCTCTATCTGGCC
AGTCGCAAGATGACCCAGCAGTAAGGCATGCGGCAATCGGCGCGATTGTG
ATGATTTACTTCATCGGCATTGGATGGGCCTTGGGCTGGAATTCAATCCA
GTATTTGATCACCGCTGAATCCTTCCCCCTCGGGGTTCGGATAGCAGGGG
TCACTCTCGTTACACTGTGGCACTACGCCAACCGGATCGGCATTTCCAAA
TACTTCTCAATATGGGGAGCGTCCATTCACATCCCCAACTCGAGTGCCAA
ACAGTGGGTCATCCCACAAAGCGTTCAGATTATGTGGGCAGGCCTGCTGC
TGATCGCTTCCATGTTTTGTGAGGAGAGTCCTCGCTTTCTATGTCGAAAG
GACCGTCCTCAGGCAGCACTCCAGTCTCTTGCACGACTATGGAATGTGTC
CCCACTGGATCCGGGGATTCATGTGGAGGTCTCGAATGTCAAAATTCAGC
TCAAACTTGAGCGCGAGGTAGCATCACGATCAGGCCTTATTGGGGTGCTG
AAAGAGCTGTTTGGAACAAAGTCCCACTTGAAACGGATCGCTTTCGTGTT
TGTCCTGCAGTGTTTGGGCGAGTGGTCCGGTCCAAACTCAGTGACTAGTC
TTGATTCTGGGCTTATCGCCAGCACTGTTGCGGAACGGTCGTTCGTTGAC
CAATTTCATCTAGAGGCCAATTATCTCAGTGCGTCCCAGAAAGCCAATCG
CTTGTCGAATATCACCTCTATGGTCCACATAGGCAGTCTACCGGGGGCTA
TAGTCGCATTCTTGTGCAGCGAGCGCATCGGAATCCTTTGGACCTTCCGT
CAATGTTGCTTGATGTGGATCATTGGTTCTGTGGTGTTTATCACATCCCG
TGACCTTGGGCAGGTATATGCCGGTCGCTTTATAATGGGTCTTGGTATTG
GACAGTTTGGTGTGATGGCCCCGATCTACCTCGGGGAGGTGGCACCCAGG
GAAATTCGCGGGATGCTTGTGGGTTTATACGGCATGTCAGAATATCTAGG
AATTATGATCGGGATGCAAGGCCTAAAGCAGCATCTTACTCTATTTAGGA
AGCTCACACTAAAGCTCCTATGTGCTGCAATCTGCTTTGGCTTATCGGGC
GCTGCCCGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF07690 |
| InterPro | IPR036259 |
| PFAM | PF00083 |
| InterPro | IPR020846 |
| InterPro | IPR005828 |
| InterPro | IPR003663 |
| InterPro | IPR005829 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000231 | supercontig | MCQH01000231:1409040..1410819 - |
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