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ATCC10864_010439-T1, ATCC10864_010439-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010439-T1
Unique NameATCC10864_010439-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1519375..1519830-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010439-T1 ID=ATCC10864_010439-T1|Name=ATCC10864_010439-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=456bp|location=Sequence derived from alignment at MCQH01000231:1519375..1519830- (Aspergillus niger ATCC 10864)
ATGCCCGCACACCTGGGCCACGAGGAGGTACTTCACCCCCACAACCACAA
CAACACCCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCC
TCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTAC
CTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATC
CATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGA
CGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTG
AAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCG
GTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATC
GGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAG
GGGTGA
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Coding sequence (CDS) from alignment at MCQH01000231:1519375..1519830-

>ATCC10864_010439-T1 ID=ATCC10864_010439-T1|Name=ATCC10864_010439-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=792bp|location=Sequence derived from alignment at MCQH01000231:1519375..1519830- (Aspergillus niger ATCC 10864)
TTCTTCACCTCCCTCACCACCCTCCTAAGCACCACATCCCAAAAAACCCG
CGGATCCGTGTACCTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCC
AGTCCCAACCATCCATTCTCATCCGCGCGACAGACGGCAACACCAACGCC
CCGAACCCCAAGACGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGC
AGCATCGAAAGTGAAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGG
CGTTCTATGCGCGGTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTG
AAGAAGAGGGATCGGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGG
GAAGGTTGTTAAGGGGTGAATGCCCGCACACCTGGGCCACGAGGAGTTCT
TCACCTCCCTCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGA
TCCGTGTACCTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTC
CCAACCATCCATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGA
ACCCCAAGACGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCA
TCGAAAGTGAAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTT
CTATGCGCGGTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGA
AGAGGGATCGGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAG
GTTGTTAAGGGGTGAATGCCCGCACACCTGGGCCACGAGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
GO:0005786signal recognition particle, endoplasmic reticulum targeting
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
GO:0030942endoplasmic reticulum signal peptide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010439ATCC10864_010439Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010439-T1ATCC10864_010439-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010439-T1.cdsATCC10864_010439-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010439-T1.exon2ATCC10864_010439-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010439-T1.exon1ATCC10864_010439-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02290
InterProIPR009018
InterProIPR003210
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1519375..1519830 -
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