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ATCC10864_010481-T1, ATCC10864_010481-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010481-T1
Unique NameATCC10864_010481-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1609571..1610728+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010481-T1 ID=ATCC10864_010481-T1|Name=ATCC10864_010481-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1158bp|location=Sequence derived from alignment at MCQH01000231:1609571..1610728+ (Aspergillus niger ATCC 10864)
ATGGCCTCAATGGGTGCTGTCCCCCAGTATGGGCAGCTGATCCGGTCCAG
TAAGTACCTGCAAGACGAATAACCCTGTTTTCTCCCCAATTGTGCCCCCT
CTCATTCTCACCTCTCCCCTGCAGTCTCTTCAGCCCGGACCGGCCTGACC
TACGTCCCTCGCCGCACTCTGGCCTACACTGTCCCTCGTCAAGCCTCCGA
AGACGGTCCCAACGGTCCTAATGACAAGTCCGAGTCCGAATCCAAGCCCT
CCACTTTGTCCTCGATCAAGAACTTCTTCTTCGGCGGCAAGCCCGGCGCC
GCCAAGCCCAAAGCTCGCCGCACCACCGCTCCCGCCAAACGCGAGGGTTC
CCTGAGCGCCGACTCCATCTTCGCAGAGGATGAAGCCAGCCCCAAGCTGG
TGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGCAAGCCGGCGCCCCCGAG
GAGGGCCAGGAAGAGGTCGACTATGCTGTTGACCGACGAAACCGGGAGAC
GATGCAGACAGTGCTGGACCCGAACCCCAAGGCGCGGACTCGCTGGGAAC
AAAAGATGGTTGCTCGCGAGATCCGTCGTCGAGGCCGCATCTCGCCCACC
GAGCTGATCATGCGGACGGAGCGCGAGTCCCTCTCCAAGTCCCATTGGTT
CAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGCTCGCCAGATTGCCGGCA
AGAACATCGACGATGCCATGCTGCAGATGCGCCTGAGCAAGAAGAAGGCC
GCCAAAGAGGTCCTCCAGCACCTCGAGCATGCTAAGAACGTCGCCGTGGT
GCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGGCAAGACCGCCAACCAGA
AGCCTGTCACCATCACCCTCAAGAACGGAGAGCGCAAGACCATCAACGAC
CCTACTTCCATCTACATCGACCAAGCGTGGGTTAACCGTGGCCCGTACGG
TTACGACTACGACCACCGCGCGCGCGGCAACATCAACCTCATGCGTCCGC
CGTACACCTCTCTGTCGGTGGTGCTGAAGGAAGAGCAGACACGTATCCGT
CAATGGCAGAACCGGGAGTCCGAGGAGCTGCGTAAGCGCAAGGCTAAGCT
CTGGACGCCGCTGCCGGACCGTAAGATTACGGCGCAGAACCAGTTCTACA
GCTGGTGA
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Coding sequence (CDS) from alignment at MCQH01000231:1609571..1610728+

>ATCC10864_010481-T1 ID=ATCC10864_010481-T1|Name=ATCC10864_010481-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2166bp|location=Sequence derived from alignment at MCQH01000231:1609571..1610728+ (Aspergillus niger ATCC 10864)
ATGGCCTCAATGGGTGCTGTCCCCCAGTATGGGCAGCTGATCCGGTCCAT
CTCTTCAGCCCGGACCGGCCTGACCTACGTCCCTCGCCGCACTCTGGCCT
ACACTGTCCCTCGTCAAGCCTCCGAAGACGGTCCCAACGGTCCTAATGAC
AAGTCCGAGTCCGAATCCAAGCCCTCCACTTTGTCCTCGATCAAGAACTT
CTTCTTCGGCGGCAAGCCCGGCGCCGCCAAGCCCAAAGCTCGCCGCACCA
CCGCTCCCGCCAAACGCGAGGGTTCCCTGAGCGCCGACTCCATCTTCGCA
GAGGATGAAGCCAGCCCCAAGCTGGTGGCGTCCGGCCGTACCCCCGCCGC
TCGCAAGCAAGCCGGCGCCCCCGAGGAGGGCCAGGAAGAGGTCGACTATG
CTGTTGACCGACGAAACCGGGAGACGATGCAGACAGTGCTGGACCCGAAC
CCCAAGGCGCGGACTCGCTGGGAACAAAAGATGGTTGCTCGCGAGATCCG
TCGTCGAGGCCGCATCTCGCCCACCGAGCTGATCATGCGGACGGAGCGCG
AGTCCCTCTCCAAGTCCCATTGGTTCAAGACCTCCGTCAAGAAGCTGGGT
CCCCTTGCTCGCCAGATTGCCGGCAAGAACATCGACGATGCCATGCTGCA
GATGCGCCTGAGCAAGAAGAAGGCCGCCAAAGAGGTCCTCCAGCACCTCG
AGCATGCTAAGAACGTCGCCGTGGTGCGTTCTGGTATGGGCCTGGGTGCC
GTCGAGGGCAAGACCGCCAACCAGAAGCCTGTCACCATCACCCTCAAGAA
CGGAGAGCGCAAGACCATCAACGACCCTACTTCCATCTACATCGACCAAG
CGTGGGTTAACCGTGGCCCGTACGGTTACGACTACGACCACCGCGCGCGC
GGCAACATCAACCTCATGCGTCCGCCGTACACCTCTCTGTCGGTGGTGCT
GAAGGAAGAGCAGACACGTATCCGTCAATGGCAGAACCGGGAGTCCGAGG
AGCTGCGTAAGCGCAAGGCTAAGCTCTGGACGCCGCTGCCGGACCGTAAG
ATTACGGCGCAGAACCAGTTCTACAGCTGGTGAATGGCCTCAATGGGTGC
TGTCCCCCAGTATGGGCAGCTGATCCGGTCCATCTCTTCAGCCCGGACCG
GCCTGACCTACGTCCCTCGCCGCACTCTGGCCTACACTGTCCCTCGTCAA
GCCTCCGAAGACGGTCCCAACGGTCCTAATGACAAGTCCGAGTCCGAATC
CAAGCCCTCCACTTTGTCCTCGATCAAGAACTTCTTCTTCGGCGGCAAGC
CCGGCGCCGCCAAGCCCAAAGCTCGCCGCACCACCGCTCCCGCCAAACGC
GAGGGTTCCCTGAGCGCCGACTCCATCTTCGCAGAGGATGAAGCCAGCCC
CAAGCTGGTGGCGTCCGGCCGTACCCCCGCCGCTCGCAAGCAAGCCGGCG
CCCCCGAGGAGGGCCAGGAAGAGGTCGACTATGCTGTTGACCGACGAAAC
CGGGAGACGATGCAGACAGTGCTGGACCCGAACCCCAAGGCGCGGACTCG
CTGGGAACAAAAGATGGTTGCTCGCGAGATCCGTCGTCGAGGCCGCATCT
CGCCCACCGAGCTGATCATGCGGACGGAGCGCGAGTCCCTCTCCAAGTCC
CATTGGTTCAAGACCTCCGTCAAGAAGCTGGGTCCCCTTGCTCGCCAGAT
TGCCGGCAAGAACATCGACGATGCCATGCTGCAGATGCGCCTGAGCAAGA
AGAAGGCCGCCAAAGAGGTCCTCCAGCACCTCGAGCATGCTAAGAACGTC
GCCGTGGTGCGTTCTGGTATGGGCCTGGGTGCCGTCGAGGGCAAGACCGC
CAACCAGAAGCCTGTCACCATCACCCTCAAGAACGGAGAGCGCAAGACCA
TCAACGACCCTACTTCCATCTACATCGACCAAGCGTGGGTTAACCGTGGC
CCGTACGGTTACGACTACGACCACCGCGCGCGCGGCAACATCAACCTCAT
GCGTCCGCCGTACACCTCTCTGTCGGTGGTGCTGAAGGAAGAGCAGACAC
GTATCCGTCAATGGCAGAACCGGGAGTCCGAGGAGCTGCGTAAGCGCAAG
GCTAAGCTCTGGACGCCGCTGCCGGACCGTAAGATTACGGCGCAGAACCA
GTTCTACAGCTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010481ATCC10864_010481Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010481-T1.exon1ATCC10864_010481-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010481-T1.exon2ATCC10864_010481-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010481-T1.cdsATCC10864_010481-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010481-T1ATCC10864_010481-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00237
InterProIPR036394
InterProIPR001063
InterProIPR005727
Properties
Property NameValue
NoteBUSCO:EOG09264LC7
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1609571..1610728 +
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