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ATCC10864_010556-T1, ATCC10864_010556-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010556-T1
Unique NameATCC10864_010556-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:45046..46250-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010556-T1 ID=ATCC10864_010556-T1|Name=ATCC10864_010556-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1205bp|location=Sequence derived from alignment at MCQH01000240:45046..46250- (Aspergillus niger ATCC 10864)
ATGTCTGGCGCAAGGCATTGGTAAGTGCTTCTCTTTACTCCATGTGATAT
GAATCCCAGTCATATCGGTCCTGACAATTGCTGGAATAGGGAGCAAGACA
AAGAGGCCACCGTCTACATCGGAAACCTCGATGAACGGGTTACAGATAGC
CTGGTATGGGAGCTGATGCTGCAGGCCGGGCGCATCGTTAACGTTCACCT
ACCGAAAGACCGAGTCACACAGTCGCATCAGGGCTATGGGTTCGTGGAAT
TCATCAGCGAGGAAGATGCCGAATACGCGTCACGAATCATGAACGGAATC
CGCCTGTATGGAAAGCCCATCCGCGTCAACAAAGCATCCGCCGACAAGCA
AAAGTCGGTGGAGATTGGGGCAGAGCTATTCGTCGGCAATCTTGATCCTA
TGGTTACGGAGCAAGTTCTTTATGACACATTCAGCCGCTTTGGAAACCTG
GTCAATATCCCCAAGGTAGGACTTTATCCTTTCTATAGGCCTGTCATGCG
GCACCGTGTCTCGGAGGGGAACTTACTAACCATGGCTGCTACTAGATTGC
GCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTTCGCCG
ACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAATATCTT
ATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGGAAAGG
TGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGCTCGTA
AACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCTCAAAC
CCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGCTCTCG
GCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTATGGCTC
CTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCCGACCC
GTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCACGGCC
GCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCCACCAG
GATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCACCTCCG
CCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCTGGTCC
CCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCGCGGGC
GTTGA
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Coding sequence (CDS) from alignment at MCQH01000240:45046..46250-

>ATCC10864_010556-T1 ID=ATCC10864_010556-T1|Name=ATCC10864_010556-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3168bp|location=Sequence derived from alignment at MCQH01000240:45046..46250- (Aspergillus niger ATCC 10864)
ATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGTGTCGTT
CGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACGGCCAAT
ATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAAGATGGG
AAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGCACAAGC
TCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCACAATTCT
CAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGTGATAGC
TCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAGAGGTAT
GGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAGCAAGCC
GACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTACCAGCA
CGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTTCCTCCC
ACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAGCAGCAC
CTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGAACACCT
GGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTATGCGCG
CGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGAAACCTC
GATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCAGGCCGG
GCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGTCGCATC
AGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAATACGCG
TCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCGCGTCAA
CAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAGAGCTAT
TCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTATGACACA
TTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGGCGCAAG
GCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGGATTTGT
GTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACATGAACG
GCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTATAAGAAA
GATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCTGGCTGC
ACAAGCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTACCTCCAC
AATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCCAACGGT
GATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATATGGGCAG
AGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTCCACAAG
CAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCAGGTTTA
CCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCAGTCCTT
CCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCCCTCAAG
CAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCGGCAGGA
ACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACCTGGCTA
TGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTACATCGGA
AACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGATGCTGCA
GGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCACACAGT
CGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGATGCCGAA
TACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCCCATCCG
CGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTGGGGCAG
AGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTTCTTTAT
GACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGATGTCTGG
CGCAAGGCATTGATTGCGCGGGATGACAACAACCTGTCAAAGGGCTATGG
ATTTGTGTCGTTCGCCGACTTTGAGTCTTCGGACGCGGCCATAACCAACA
TGAACGGCCAATATCTTATGAACAAGCAGGTCTCCGTGCAATACGCCTAT
AAGAAAGATGGGAAAGGTGAACGCCACGGTGATGAAGCAGAACGAATGCT
GGCTGCACAAGCTCGTAAACATAACGTGCGCCCACCAACCCAGCCGCTAC
CTCCACAATTCTCAAACCCAGGGACACCTATGGTGCCAGCTGCGATGGCC
AACGGTGATAGCTCTCGGCCAATGAGTACTAATCCACCAGACCTAAATAT
GGGCAGAGGTATGGCTCCTCCGAATGTACCGTTCCAAAACGTACCTCCTC
CACAAGCAAGCCGACCCGTTCCACCTACATCTCTGGCGAACCCACCCCCA
GGTTTACCAGCACGGCCGCCACCTTCTCAGGCCGGATATGGCGGGCCGCA
GTCCTTCCTCCCACCAGGATTCAATGGTGCTGGTCAACAACCTCCCTTCC
CTCAAGCAGCACCTCCGCCAGGCTTTGCTCCACCGGGGTTCGGTTCACCG
GCAGGAACACCTGGTCCCCCACCTCCGTTGCCCCCGGGATTCCAGCAACC
TGGCTATGCGCGCGGGCGTTGAGGAGCAAGACAAAGAGGCCACCGTCTAC
ATCGGAAACCTCGATGAACGGGTTACAGATAGCCTGGTATGGGAGCTGAT
GCTGCAGGCCGGGCGCATCGTTAACGTTCACCTACCGAAAGACCGAGTCA
CACAGTCGCATCAGGGCTATGGGTTCGTGGAATTCATCAGCGAGGAAGAT
GCCGAATACGCGTCACGAATCATGAACGGAATCCGCCTGTATGGAAAGCC
CATCCGCGTCAACAAAGCATCCGCCGACAAGCAAAAGTCGGTGGAGATTG
GGGCAGAGCTATTCGTCGGCAATCTTGATCCTATGGTTACGGAGCAAGTT
CTTTATGACACATTCAGCCGCTTTGGAAACCTGGTCAATATCCCCAAGAT
GTCTGGCGCAAGGCATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010556ATCC10864_010556Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010556-T1ATCC10864_010556-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010556-T1.cdsATCC10864_010556-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010556-T1.exon3ATCC10864_010556-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010556-T1.exon2ATCC10864_010556-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010556-T1.exon1ATCC10864_010556-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012677
InterProIPR034158
InterProIPR034159
PFAMPF00076
InterProIPR000504
InterProIPR035979
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:45046..46250 -
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