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ATCC10864_010584-T1, ATCC10864_010584-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010584-T1
Unique NameATCC10864_010584-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:132433..134602-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010584-T1 ID=ATCC10864_010584-T1|Name=ATCC10864_010584-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2170bp|location=Sequence derived from alignment at MCQH01000240:132433..134602- (Aspergillus niger ATCC 10864)
ATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGAC
TGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGT
TAGTACACCCGTTGCGACAGATGGTCCTGGATATGTGTGCTGACTTGTTC
AAGAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAGCTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GGTAAGTCTCTATTCGCTTTCTTTTCTCCTTGCAACCACCCCCTATTCCT
TTGATATACAACACGGCTTTTCGCCGATGCCATCGCTAAGTCAAGGCTAC
TCCTGCGACTTCATGTCGTGTTATTCACTATGGGAGACTGTCTGTTACAG
CTTTGGCAGATTGACGCTGGTCCGCGCCGACCTTCTTTCTGAAGCTAGGC
TGATTGGTTTTCGTTTTGAAAGCCAATCGTTAAGGACCGAGCTGTGTTCT
GTTTTTGAGTTGAGTCCTGCTTCCGCTCTTGAAGTGGCATCATAGCAGGT
CTCTTAGTAACATTTCACACATCCTGTCATCATACTTCTGTTTCTTTCTT
TTCTTAATTTTTTTTTCTCTTATTCTTTGACTATGCTATACTTTGATAGC
AACGCTGGTGTTCAGCTGCTAACGTGACACCAGGCTGCTTGGGTTCGCCA
CCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATT
CCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTG
CACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACAC
TGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTG
TGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATG
AAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAA
CGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACG
TAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCT
AAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGA
GTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAG
AGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGT
GGAAAGATCCCTTGGTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGG
CGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGC
GGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCT
GAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGA
AGATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGA
GCGGAGCGGAGGAAGATTAA
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Coding sequence (CDS) from alignment at MCQH01000240:132433..134602-

>ATCC10864_010584-T1 ID=ATCC10864_010584-T1|Name=ATCC10864_010584-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5049bp|location=Sequence derived from alignment at MCQH01000240:132433..134602- (Aspergillus niger ATCC 10864)
GCTGCTTGGGTTCGCCACCTTTCTAAGGATTATCCTACCTTGGCTTTCCA
TGCTTCTATCAACAATTCCTTCGGGAAAGGCTCGTTGATCCAGCTACTGA
GACAATTTTCTTCTTTGCACTCGGACCGGAAGCAGATTTCCGTGGGATTC
ATTGGATACCCCAACACTGGAAAGTCTTCCGTCATCAACACCTTGCGCAA
GAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGTGAAACCAAGGTGTGGC
AGTACGTTACCTTGATGAAGAGGATCTACCTCATTGATTGCCCTGGTGTG
GTTCCTCCGAACCCGAACGACTCTCCAGAGGATATTCTTCTCCGTGGTGT
CGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAGTACATCCCAGCTATTC
TCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTACCTACGGTATCAAGAGC
ACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCG
ACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGTGTTGCCAAGATGGTCA
TTAACGACTTCCTTCGTGGAAAGATCCCTTGGTTCACTGCCCCCCCTCAC
AACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGG
CGAAATGAGCCGCAAGCGGAAGCTTGATGAGACCGCTCCTGAGGCTGCTG
ATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTC
GAGGGCTTTGACGAGGAAGATGATGATGACGACTCGATCGCCAATCTTGA
GGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGATTAAAGATGCGAAGAAG
TTGAGGACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGCTGA
AGGAAAGATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCGTCG
CTAGGATTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATCTCG
CAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGA
TCCGTATTCAGTCTTGCTCAAGACCAACAAGCTTCCCATGAGCCTGATCA
GAGATGACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATGGCC
ATCGAGACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAGGAA
ACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCG
CCAAGATGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCATGAA
GATGGTACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGACTC
TAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTA
AGCGTATTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTTGTC
ATCCATCTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAGTAT
CGAAAAATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCGTCT
TGAACAAGTGTGATCTTGTGCCTACAGGCGTGGCGATGGGTACCTTCAAG
AAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCATGGG
GAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGCTGCTTGGGTTCGCCA
CCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATT
CCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTG
CACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACAC
TGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTG
TGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATG
AAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAA
CGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACG
TAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCT
AAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGA
GTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAG
AGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGT
GGAAAGATCCCTTGGTTCACTGCCCCCCCTCACAACAGTGGCGAGGAGGG
CGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGC
GGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCT
GAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGA
AGATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGA
GCGGAGCGGAGGAAGATTAAAGATGCGAAGAAGTTGAGGACCTTGAATAT
GCTCAAGGATGGTAAACCCCAACGTAACGCTGAAGGAAAGATCACCAAGG
CTGCTTCGTACCAGTCTCGAGACGCCCCCGTCGCTAGGATTGAACCCAAC
CGTAAATGGTTTGGAAACACCAGAGTGATCTCGCAAGAGGCTCTGTCCTC
TTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGATCCGTATTCAGTCTTGC
TCAAGACCAACAAGCTTCCCATGAGCCTGATCAGAGATGACAAGGGTGTA
AATGGATTGAAGCAGCACCAGGCCAAGATGGCCATCGAGACGAATCCCTT
CAGTGACACCTTCGGGCCCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTG
TTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCGCCAAGATGCACGACGCC
TATGTTGAGAAGTCGGACCATGCTACTCATGAAGATGGTACTATGGTGGT
GAACGGTGATGACGTCGCAGTAGAGGAGGACTCTAGTGTCGCGCCCATCG
CAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTAAGCGTATTTGGAACGAA
CTTTACAAGGTCATTGATTCCTCCGATGTTGTCATCCATCTCCTTGATGC
TCGTGATCCGGAAGGTACACGGTGCAGGAGTATCGAAAAATACATCCGGG
AGGAGGCTCCTCACAAGCACTTGATTTTCGTCTTGAACAAGTGTGATCTT
GTGCCTACAGGCGTGGCGATGGGTACCTTCAAGAAGGAAGCCTCTCGTAA
AGAGCGGCAGGGGAAGACTGGAGATGGCATGGGGAACGTCCGGGTAAAGG
GTGAAAACTTTTACAGGCTGCTTGGGTTCGCCACCTTTCTAAGGATTATC
CTACCTTGGCTTTCCATGCTTCTATCAACAATTCCTTCGGGAAAGGCTCG
TTGATCCAGCTACTGAGACAATTTTCTTCTTTGCACTCGGACCGGAAGCA
GATTTCCGTGGGATTCATTGGATACCCCAACACTGGAAAGTCTTCCGTCA
TCAACACCTTGCGCAAGAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGT
GAAACCAAGGTGTGGCAGTACGTTACCTTGATGAAGAGGATCTACCTCAT
TGATTGCCCTGGTGTGGTTCCTCCGAACCCGAACGACTCTCCAGAGGATA
TTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAG
TACATCCCAGCTATTCTCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTAC
CTACGGTATCAAGAGCACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTG
CCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGT
GTTGCCAAGATGGTCATTAACGACTTCCTTCGTGGAAAGATCCCTTGGTT
CACTGCCCCCCCTCACAACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTC
GTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAGACC
GCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGG
CTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATGACGACT
CGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGAT
TAAAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAGCTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGA
CTGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOG2ATCC10864_010584Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010584-T1ATCC10864_010584-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010584-T1.cdsATCC10864_010584-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010584-T1.exon3ATCC10864_010584-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010584-T1.exon2ATCC10864_010584-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010584-T1.exon1ATCC10864_010584-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006073
InterProIPR027417
PFAMPF08153
InterProIPR012971
InterProIPR023179
InterProIPR024929
InterProIPR030378
Properties
Property NameValue
ProductGTPase required for pre-60S ribosomal subunit nuclear export and maturation
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:132433..134602 -
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