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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000240:168115..170701+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010597-T1 ID=ATCC10864_010597-T1|Name=ATCC10864_010597-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2587bp|location=Sequence derived from alignment at MCQH01000240:168115..170701+ (Aspergillus niger ATCC 10864)
ATGGATGGTATTATGACTAACGGTTCGTCGGAGGCGCACCCTCCTATGCC
TCCTCCGGAGCCCATCGAGCGCCCTCCTACTCCCCCGCCACCCCCTCCGG
AGGATTCCGCCCTCCCTCCGCCGCCGCCAGACACGTCCGCGCCTCCTCCA
CCGCCGGAAGATCTTCCACCTGCGCCGCCGCCGGAGACTGAGCCCAAGAA
GAAGAAGGTTGGATGGGGCACGAAACGACCAGCCCCTACGCCGCTGAGTG
TGGAGGAACTCGTACGGAAGAAGCGAGAAGCTGATGCCGCAGCGGCGAAG
GTACGAATCAGCTCCGAGGATTCCATATAAGCTCAGATAGCTAACATCCC
ACCTCTCTACACAGCCGAAATTTCTATCCAAGAAAGAACGAGAGAAGCTC
GCGCTGGAGAAACGGGCTCAAGAAGTCGCAGCAACCCGCAGACTGAAATC
CGAGCATGCCTCTAATGGCGTCGACAGAAGCGCTACGCACTCGCCCTCTG
TCAGCTCCGAGGGCCCTAACGGCGATGCGAGATCCATCCCCACTGGCCCT
CGAGCCATGCGCAACTCAGACGCTGCCCCGACTGCCCCGGCAGCTATGCG
CCATTCACAGTCCCATAACAAGAACTACGACCTCGCGCCACCACCTCCTC
CGAAATCCATGTCCTTCGGTCTGACGAGCGGAAAGGGCGACAGCCGGTTC
GTGGACGAAGACGAGGCCGCAGCGCAAGCAGCCCTAGTGAAACAAAGATA
CATGGGTGCCGACCAAACATCAAACTTCTCCGCCAAGAAGAAACGCAAGA
GAACCACAGACCGAAAATTCAACTTCGAGTGGAACGCCGAAGAAGACACC
AGTGGCGATTACAACCCGCTATACCAACACCGACACGAAACCAACTTCTT
CGGCCGTGGTCGCCTCGCCGGCTTCGGCGACGACGTCGCAGAATCCGTCG
CCCACAAATATGCCCGCGCCCTGGAAGACCGTGACCGCGAAGCAGGAAGC
ATCCGCGCCAGAGAAATCCTCGAAATGGAGCGCCGCCGCCGAGAAGAAAG
CACCCGCAACCAGCTCGACAAACACTGGAGCGAGAAGAAACTCGAGCACA
TGCGCGAACGCGACTGGCGTATCTTCAAGGAGGACTTCAACATCAGCACC
AAGGGCGGCAGCGTGCCCAACCCTATGCGCTCCTGGGACGAATCCAACCT
CCCCAAGCGCCTCATGGAGCTCATCAACCGCGTGGGCTACAAAGAACCCA
CGCCCATTCAACGCGCCGCCATCCCCATCGCCATGCAAAACCGCGACCTA
ATCGGTGTCGCCGTCACCGGTTCCGGTAAAACCGCCGCCTTCCTCCTCCC
CCTCCTCTGCTACATCGCGGAGCTCCCACGCATCGACGAATTCGAATGGC
GCAAAGCCGACGGCCCCTACGCCATCGTCCTCGCGCCGACCCGCGAACTG
GCACAACAAATCGAAATCGAAGCCAAAAAATTCACTGGCCCGCTCGGCTT
CAACGTCGTCAGTATAGTCGGAGGTCACTCCCTCGAAGAACAAGCCTACA
GTCTCCGCGACGGCGCCGAAATCATCATCGCCACCCCCGGCCGTCTCGTC
GACTGCATCGAGCGCCGCATTCTCGTCCTCAGCCAATGCTGCTACGTCAT
CATGGACGAAGCGGACCGCATGATCGACCTGGGCTTCGAAGAACCCGTCA
ACAAGATCCTCGACGCCCTCCCCGTCTCCAACGAAAAACCCGACTCCGAA
GACGCCGAAAACCCCCTCGCCATGTCCCGCCACATCAACCACGACCAGCA
CCGCTACCGCCAAACAATGATGTACACAGCCACCATGCCCACCGCCGTCG
AACGCATCGCCCGAAAATACCTCCGCCGTCCGGCAATCGTCACGATCGGC
TCCGCCGGCGAAGCCGTCGACACCGTCGAGCAGCGCGTGGAAATGATCGC
CGGCGAAGACAAGCGCAAGAAACGTCTCGGCGATATCCTCTCGTCGGGAG
AATTCCGCGCCCCGATCATCGTCTTCGTCAACATCAAGCGCAACTGCGAT
GCCATCGCTCGCGAAATCAAACAGTGGGGATTCTCCTCCGTTACATTACA
CGGTAGTAAAACACAAGATCAGCGTGAAGCCGCCCTCGCGTCCGTTAGGA
ATGGAACCACAGATGTCCTGGTAGCTACGGATCTGGCGGGTCGTGGTATC
GATGTGCCGGATGTTAGTCTCGTCGTGAACTTTAACATGGCGACGAGTAT
TGAGAGCTATACGCATCGTATTGGTCGTACCGGTCGTGCCGGGAAGAGTG
GTGTGGCTATTACTTTCTTGGGTAATGAGGATGCGGATGTTATGTACGTG
TTTCCCCCTCTCCCCTCTACTTATCTTATATTCTATGCCCTTGGCGTTGT
TATATTGTGGATGATACTAACAAGTGGGATTAGGTACGACCTCAAGCAAA
TGCTCATGAAGTCGCCCATTTCTCGTGTTCCGGAGGAACTGCGTAAACAT
GAGGCGGCGCAGTCGAAACCTACGAGGGGTTTCTCTTCCAAGAAGAATAA
TGAGGAGGGTGGTGGTGGTGGGAAGGTGGGATGGTAA back to topCoding sequence (CDS) from alignment at MCQH01000240:168115..170701+ >ATCC10864_010597-T1 ID=ATCC10864_010597-T1|Name=ATCC10864_010597-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7299bp|location=Sequence derived from alignment at MCQH01000240:168115..170701+ (Aspergillus niger ATCC 10864)
ATGGATGGTATTATGACTAACGGTTCGTCGGAGGCGCACCCTCCTATGCC
TCCTCCGGAGCCCATCGAGCGCCCTCCTACTCCCCCGCCACCCCCTCCGG
AGGATTCCGCCCTCCCTCCGCCGCCGCCAGACACGTCCGCGCCTCCTCCA
CCGCCGGAAGATCTTCCACCTGCGCCGCCGCCGGAGACTGAGCCCAAGAA
GAAGAAGGTTGGATGGGGCACGAAACGACCAGCCCCTACGCCGCTGAGTG
TGGAGGAACTCGTACGGAAGAAGCGAGAAGCTGATGCCGCAGCGGCGAAG
CCGAAATTTCTATCCAAGAAAGAACGAGAGAAGCTCGCGCTGGAGAAACG
GGCTCAAGAAGTCGCAGCAACCCGCAGACTGAAATCCGAGCATGCCTCTA
ATGGCGTCGACAGAAGCGCTACGCACTCGCCCTCTGTCAGCTCCGAGGGC
CCTAACGGCGATGCGAGATCCATCCCCACTGGCCCTCGAGCCATGCGCAA
CTCAGACGCTGCCCCGACTGCCCCGGCAGCTATGCGCCATTCACAGTCCC
ATAACAAGAACTACGACCTCGCGCCACCACCTCCTCCGAAATCCATGTCC
TTCGGTCTGACGAGCGGAAAGGGCGACAGCCGGTTCGTGGACGAAGACGA
GGCCGCAGCGCAAGCAGCCCTAGTGAAACAAAGATACATGGGTGCCGACC
AAACATCAAACTTCTCCGCCAAGAAGAAACGCAAGAGAACCACAGACCGA
AAATTCAACTTCGAGTGGAACGCCGAAGAAGACACCAGTGGCGATTACAA
CCCGCTATACCAACACCGACACGAAACCAACTTCTTCGGCCGTGGTCGCC
TCGCCGGCTTCGGCGACGACGTCGCAGAATCCGTCGCCCACAAATATGCC
CGCGCCCTGGAAGACCGTGACCGCGAAGCAGGAAGCATCCGCGCCAGAGA
AATCCTCGAAATGGAGCGCCGCCGCCGAGAAGAAAGCACCCGCAACCAGC
TCGACAAACACTGGAGCGAGAAGAAACTCGAGCACATGCGCGAACGCGAC
TGGCGTATCTTCAAGGAGGACTTCAACATCAGCACCAAGGGCGGCAGCGT
GCCCAACCCTATGCGCTCCTGGGACGAATCCAACCTCCCCAAGCGCCTCA
TGGAGCTCATCAACCGCGTGGGCTACAAAGAACCCACGCCCATTCAACGC
GCCGCCATCCCCATCGCCATGCAAAACCGCGACCTAATCGGTGTCGCCGT
CACCGGTTCCGGTAAAACCGCCGCCTTCCTCCTCCCCCTCCTCTGCTACA
TCGCGGAGCTCCCACGCATCGACGAATTCGAATGGCGCAAAGCCGACGGC
CCCTACGCCATCGTCCTCGCGCCGACCCGCGAACTGGCACAACAAATCGA
AATCGAAGCCAAAAAATTCACTGGCCCGCTCGGCTTCAACGTCGTCAGTA
TAGTCGGAGGTCACTCCCTCGAAGAACAAGCCTACAGTCTCCGCGACGGC
GCCGAAATCATCATCGCCACCCCCGGCCGTCTCGTCGACTGCATCGAGCG
CCGCATTCTCGTCCTCAGCCAATGCTGCTACGTCATCATGGACGAAGCGG
ACCGCATGATCGACCTGGGCTTCGAAGAACCCGTCAACAAGATCCTCGAC
GCCCTCCCCGTCTCCAACGAAAAACCCGACTCCGAAGACGCCGAAAACCC
CCTCGCCATGTCCCGCCACATCAACCACGACCAGCACCGCTACCGCCAAA
CAATGATGTACACAGCCACCATGCCCACCGCCGTCGAACGCATCGCCCGA
AAATACCTCCGCCGTCCGGCAATCGTCACGATCGGCTCCGCCGGCGAAGC
CGTCGACACCGTCGAGCAGCGCGTGGAAATGATCGCCGGCGAAGACAAGC
GCAAGAAACGTCTCGGCGATATCCTCTCGTCGGGAGAATTCCGCGCCCCG
ATCATCGTCTTCGTCAACATCAAGCGCAACTGCGATGCCATCGCTCGCGA
AATCAAACAGTGGGGATTCTCCTCCGTTACATTACACGGTAGTAAAACAC
AAGATCAGCGTGAAGCCGCCCTCGCGTCCGTTAGGAATGGAACCACAGAT
GTCCTGGTAGCTACGGATCTGGCGGGTCGTGGTATCGATGTGCCGGATGT
TAGTCTCGTCGTGAACTTTAACATGGCGACGAGTATTGAGAGCTATACGC
ATCGTATTGGTCGTACCGGTCGTGCCGGGAAGAGTGGTGTGGCTATTACT
TTCTTGGGTAATGAGGATGCGGATGTTATGTACGACCTCAAGCAAATGCT
CATGAAGTCGCCCATTTCTCGTGTTCCGGAGGAACTGCGTAAACATGAGG
CGGCGCAGTCGAAACCTACGAGGGGTTTCTCTTCCAAGAAGAATAATGAG
GAGGGTGGTGGTGGTGGGAAGGTGGGATGGTAAATGGATGGTATTATGAC
TAACGGTTCGTCGGAGGCGCACCCTCCTATGCCTCCTCCGGAGCCCATCG
AGCGCCCTCCTACTCCCCCGCCACCCCCTCCGGAGGATTCCGCCCTCCCT
CCGCCGCCGCCAGACACGTCCGCGCCTCCTCCACCGCCGGAAGATCTTCC
ACCTGCGCCGCCGCCGGAGACTGAGCCCAAGAAGAAGAAGGTTGGATGGG
GCACGAAACGACCAGCCCCTACGCCGCTGAGTGTGGAGGAACTCGTACGG
AAGAAGCGAGAAGCTGATGCCGCAGCGGCGAAGCCGAAATTTCTATCCAA
GAAAGAACGAGAGAAGCTCGCGCTGGAGAAACGGGCTCAAGAAGTCGCAG
CAACCCGCAGACTGAAATCCGAGCATGCCTCTAATGGCGTCGACAGAAGC
GCTACGCACTCGCCCTCTGTCAGCTCCGAGGGCCCTAACGGCGATGCGAG
ATCCATCCCCACTGGCCCTCGAGCCATGCGCAACTCAGACGCTGCCCCGA
CTGCCCCGGCAGCTATGCGCCATTCACAGTCCCATAACAAGAACTACGAC
CTCGCGCCACCACCTCCTCCGAAATCCATGTCCTTCGGTCTGACGAGCGG
AAAGGGCGACAGCCGGTTCGTGGACGAAGACGAGGCCGCAGCGCAAGCAG
CCCTAGTGAAACAAAGATACATGGGTGCCGACCAAACATCAAACTTCTCC
GCCAAGAAGAAACGCAAGAGAACCACAGACCGAAAATTCAACTTCGAGTG
GAACGCCGAAGAAGACACCAGTGGCGATTACAACCCGCTATACCAACACC
GACACGAAACCAACTTCTTCGGCCGTGGTCGCCTCGCCGGCTTCGGCGAC
GACGTCGCAGAATCCGTCGCCCACAAATATGCCCGCGCCCTGGAAGACCG
TGACCGCGAAGCAGGAAGCATCCGCGCCAGAGAAATCCTCGAAATGGAGC
GCCGCCGCCGAGAAGAAAGCACCCGCAACCAGCTCGACAAACACTGGAGC
GAGAAGAAACTCGAGCACATGCGCGAACGCGACTGGCGTATCTTCAAGGA
GGACTTCAACATCAGCACCAAGGGCGGCAGCGTGCCCAACCCTATGCGCT
CCTGGGACGAATCCAACCTCCCCAAGCGCCTCATGGAGCTCATCAACCGC
GTGGGCTACAAAGAACCCACGCCCATTCAACGCGCCGCCATCCCCATCGC
CATGCAAAACCGCGACCTAATCGGTGTCGCCGTCACCGGTTCCGGTAAAA
CCGCCGCCTTCCTCCTCCCCCTCCTCTGCTACATCGCGGAGCTCCCACGC
ATCGACGAATTCGAATGGCGCAAAGCCGACGGCCCCTACGCCATCGTCCT
CGCGCCGACCCGCGAACTGGCACAACAAATCGAAATCGAAGCCAAAAAAT
TCACTGGCCCGCTCGGCTTCAACGTCGTCAGTATAGTCGGAGGTCACTCC
CTCGAAGAACAAGCCTACAGTCTCCGCGACGGCGCCGAAATCATCATCGC
CACCCCCGGCCGTCTCGTCGACTGCATCGAGCGCCGCATTCTCGTCCTCA
GCCAATGCTGCTACGTCATCATGGACGAAGCGGACCGCATGATCGACCTG
GGCTTCGAAGAACCCGTCAACAAGATCCTCGACGCCCTCCCCGTCTCCAA
CGAAAAACCCGACTCCGAAGACGCCGAAAACCCCCTCGCCATGTCCCGCC
ACATCAACCACGACCAGCACCGCTACCGCCAAACAATGATGTACACAGCC
ACCATGCCCACCGCCGTCGAACGCATCGCCCGAAAATACCTCCGCCGTCC
GGCAATCGTCACGATCGGCTCCGCCGGCGAAGCCGTCGACACCGTCGAGC
AGCGCGTGGAAATGATCGCCGGCGAAGACAAGCGCAAGAAACGTCTCGGC
GATATCCTCTCGTCGGGAGAATTCCGCGCCCCGATCATCGTCTTCGTCAA
CATCAAGCGCAACTGCGATGCCATCGCTCGCGAAATCAAACAGTGGGGAT
TCTCCTCCGTTACATTACACGGTAGTAAAACACAAGATCAGCGTGAAGCC
GCCCTCGCGTCCGTTAGGAATGGAACCACAGATGTCCTGGTAGCTACGGA
TCTGGCGGGTCGTGGTATCGATGTGCCGGATGTTAGTCTCGTCGTGAACT
TTAACATGGCGACGAGTATTGAGAGCTATACGCATCGTATTGGTCGTACC
GGTCGTGCCGGGAAGAGTGGTGTGGCTATTACTTTCTTGGGTAATGAGGA
TGCGGATGTTATGTACGACCTCAAGCAAATGCTCATGAAGTCGCCCATTT
CTCGTGTTCCGGAGGAACTGCGTAAACATGAGGCGGCGCAGTCGAAACCT
ACGAGGGGTTTCTCTTCCAAGAAGAATAATGAGGAGGGTGGTGGTGGTGG
GAAGGTGGGATGGTAAATGGATGGTATTATGACTAACGGTTCGTCGGAGG
CGCACCCTCCTATGCCTCCTCCGGAGCCCATCGAGCGCCCTCCTACTCCC
CCGCCACCCCCTCCGGAGGATTCCGCCCTCCCTCCGCCGCCGCCAGACAC
GTCCGCGCCTCCTCCACCGCCGGAAGATCTTCCACCTGCGCCGCCGCCGG
AGACTGAGCCCAAGAAGAAGAAGGTTGGATGGGGCACGAAACGACCAGCC
CCTACGCCGCTGAGTGTGGAGGAACTCGTACGGAAGAAGCGAGAAGCTGA
TGCCGCAGCGGCGAAGCCGAAATTTCTATCCAAGAAAGAACGAGAGAAGC
TCGCGCTGGAGAAACGGGCTCAAGAAGTCGCAGCAACCCGCAGACTGAAA
TCCGAGCATGCCTCTAATGGCGTCGACAGAAGCGCTACGCACTCGCCCTC
TGTCAGCTCCGAGGGCCCTAACGGCGATGCGAGATCCATCCCCACTGGCC
CTCGAGCCATGCGCAACTCAGACGCTGCCCCGACTGCCCCGGCAGCTATG
CGCCATTCACAGTCCCATAACAAGAACTACGACCTCGCGCCACCACCTCC
TCCGAAATCCATGTCCTTCGGTCTGACGAGCGGAAAGGGCGACAGCCGGT
TCGTGGACGAAGACGAGGCCGCAGCGCAAGCAGCCCTAGTGAAACAAAGA
TACATGGGTGCCGACCAAACATCAAACTTCTCCGCCAAGAAGAAACGCAA
GAGAACCACAGACCGAAAATTCAACTTCGAGTGGAACGCCGAAGAAGACA
CCAGTGGCGATTACAACCCGCTATACCAACACCGACACGAAACCAACTTC
TTCGGCCGTGGTCGCCTCGCCGGCTTCGGCGACGACGTCGCAGAATCCGT
CGCCCACAAATATGCCCGCGCCCTGGAAGACCGTGACCGCGAAGCAGGAA
GCATCCGCGCCAGAGAAATCCTCGAAATGGAGCGCCGCCGCCGAGAAGAA
AGCACCCGCAACCAGCTCGACAAACACTGGAGCGAGAAGAAACTCGAGCA
CATGCGCGAACGCGACTGGCGTATCTTCAAGGAGGACTTCAACATCAGCA
CCAAGGGCGGCAGCGTGCCCAACCCTATGCGCTCCTGGGACGAATCCAAC
CTCCCCAAGCGCCTCATGGAGCTCATCAACCGCGTGGGCTACAAAGAACC
CACGCCCATTCAACGCGCCGCCATCCCCATCGCCATGCAAAACCGCGACC
TAATCGGTGTCGCCGTCACCGGTTCCGGTAAAACCGCCGCCTTCCTCCTC
CCCCTCCTCTGCTACATCGCGGAGCTCCCACGCATCGACGAATTCGAATG
GCGCAAAGCCGACGGCCCCTACGCCATCGTCCTCGCGCCGACCCGCGAAC
TGGCACAACAAATCGAAATCGAAGCCAAAAAATTCACTGGCCCGCTCGGC
TTCAACGTCGTCAGTATAGTCGGAGGTCACTCCCTCGAAGAACAAGCCTA
CAGTCTCCGCGACGGCGCCGAAATCATCATCGCCACCCCCGGCCGTCTCG
TCGACTGCATCGAGCGCCGCATTCTCGTCCTCAGCCAATGCTGCTACGTC
ATCATGGACGAAGCGGACCGCATGATCGACCTGGGCTTCGAAGAACCCGT
CAACAAGATCCTCGACGCCCTCCCCGTCTCCAACGAAAAACCCGACTCCG
AAGACGCCGAAAACCCCCTCGCCATGTCCCGCCACATCAACCACGACCAG
CACCGCTACCGCCAAACAATGATGTACACAGCCACCATGCCCACCGCCGT
CGAACGCATCGCCCGAAAATACCTCCGCCGTCCGGCAATCGTCACGATCG
GCTCCGCCGGCGAAGCCGTCGACACCGTCGAGCAGCGCGTGGAAATGATC
GCCGGCGAAGACAAGCGCAAGAAACGTCTCGGCGATATCCTCTCGTCGGG
AGAATTCCGCGCCCCGATCATCGTCTTCGTCAACATCAAGCGCAACTGCG
ATGCCATCGCTCGCGAAATCAAACAGTGGGGATTCTCCTCCGTTACATTA
CACGGTAGTAAAACACAAGATCAGCGTGAAGCCGCCCTCGCGTCCGTTAG
GAATGGAACCACAGATGTCCTGGTAGCTACGGATCTGGCGGGTCGTGGTA
TCGATGTGCCGGATGTTAGTCTCGTCGTGAACTTTAACATGGCGACGAGT
ATTGAGAGCTATACGCATCGTATTGGTCGTACCGGTCGTGCCGGGAAGAG
TGGTGTGGCTATTACTTTCTTGGGTAATGAGGATGCGGATGTTATGTACG
ACCTCAAGCAAATGCTCATGAAGTCGCCCATTTCTCGTGTTCCGGAGGAA
CTGCGTAAACATGAGGCGGCGCAGTCGAAACCTACGAGGGGTTTCTCTTC
CAAGAAGAATAATGAGGAGGGTGGTGGTGGTGGGAAGGTGGGATGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
| GO:0003724 | RNA helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00270 |
| InterPro | IPR027417 |
| InterPro | IPR000629 |
| PFAM | PF00271 |
| InterPro | IPR014014 |
| InterPro | IPR001650 |
| InterPro | IPR011545 |
| InterPro | IPR014001 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261JWS |
| Product | mRNA splicing protein prp28 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000240 | supercontig | MCQH01000240:168115..170701 + |
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