You are here

Home

ATCC10864_010606-T1, ATCC10864_010606-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010606-T1
Unique NameATCC10864_010606-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:209162..209746-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010606-T1 ID=ATCC10864_010606-T1|Name=ATCC10864_010606-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=585bp|location=Sequence derived from alignment at MCQH01000240:209162..209746- (Aspergillus niger ATCC 10864)
ATGACCAGATCCAACCACCCCCTCACCCAAGACTACTACGAAGTCCTCAA
CCTCCCCTTCACGGAGACTCCCACAGCGCTTTCTAAACAACAACTCAAAG
CAGCCTACCACAAAGCTCTGCTAAAGTACCACCCGGACAAAGCGCCCGGC
GCAATCGCAGACACCAGCAGCCTTCCCACATCAGACACAAACTCTTCATC
GCACACAAGCCATCGCTACACAATAGACGAGATCACAACCGCGTACAAAA
CACTTTCTGATCCATATCTACGCGCTGAATACGATCGGTCGCTGCGACTC
GATCGCGCAAGGGTCGCGGAGCGGGAGAAGACAGGGACGGTTTTCCATAC
GGGGTTGGAGGTTGTTGATCTGGAGGATCTTGCGTGCGATGAGAGTGATG
CAGACGCTGCGCTCTGGTATAGAGGGTGTCGGTGTGGCGATGAGAGGGGG
TTTTTGGTTACGGAGCAGGACTTGGAGAGGGAGGCGGATCATGGGGAGAT
TGTTGTTGGGTGTCGGGGGTGTAGCTTGTGGATGAAGGTTTTGTTTGCTG
TTGAGGATGGGGATGGCGATGAGCAGAATACTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000240:209162..209746-

>ATCC10864_010606-T1 ID=ATCC10864_010606-T1|Name=ATCC10864_010606-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=585bp|location=Sequence derived from alignment at MCQH01000240:209162..209746- (Aspergillus niger ATCC 10864)
ATGACCAGATCCAACCACCCCCTCACCCAAGACTACTACGAAGTCCTCAA
CCTCCCCTTCACGGAGACTCCCACAGCGCTTTCTAAACAACAACTCAAAG
CAGCCTACCACAAAGCTCTGCTAAAGTACCACCCGGACAAAGCGCCCGGC
GCAATCGCAGACACCAGCAGCCTTCCCACATCAGACACAAACTCTTCATC
GCACACAAGCCATCGCTACACAATAGACGAGATCACAACCGCGTACAAAA
CACTTTCTGATCCATATCTACGCGCTGAATACGATCGGTCGCTGCGACTC
GATCGCGCAAGGGTCGCGGAGCGGGAGAAGACAGGGACGGTTTTCCATAC
GGGGTTGGAGGTTGTTGATCTGGAGGATCTTGCGTGCGATGAGAGTGATG
CAGACGCTGCGCTCTGGTATAGAGGGTGTCGGTGTGGCGATGAGAGGGGG
TTTTTGGTTACGGAGCAGGACTTGGAGAGGGAGGCGGATCATGGGGAGAT
TGTTGTTGGGTGTCGGGGGTGTAGCTTGTGGATGAAGGTTTTGTTTGCTG
TTGAGGATGGGGATGGCGATGAGCAGAATACTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0017183peptidyl-diphthamide biosynthetic process from peptidyl-histidine
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DPH4ATCC10864_010606Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010606-T1.cdsATCC10864_010606-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010606-T1.exon1ATCC10864_010606-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010606-T1ATCC10864_010606-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00226
InterProIPR036869
PFAMPF05207
InterProIPR044248
InterProIPR036671
InterProIPR007872
InterProIPR001623
Properties
Property NameValue
ProductDiphthamide biosynthesis protein 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:209162..209746 -
Powered by Drupal