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ATCC10864_010643-T1, ATCC10864_010643-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010643-T1
Unique NameATCC10864_010643-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:316260..317141+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010643-T1 ID=ATCC10864_010643-T1|Name=ATCC10864_010643-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=882bp|location=Sequence derived from alignment at MCQH01000240:316260..317141+ (Aspergillus niger ATCC 10864)
ATGCACCTCCTAACCACCCTCCTCCTATCCACCACCACCACCATCACCAC
CCTCCTAGCAACCGCCTACTCCATCCCCCCCAACCTATCCGCCCTCTACA
ACAAACACAAGGTCTGCCCTAATAGCCCCCCTCCCCTACTCCCTCCCCCA
ACCCATCCACTAAACCAAAACAACAAAACAGTCCAAACCGTGCCTCCACC
CCCTCGCCACCGGCTTCCACGACGGCCAAAACCCCACCGATTCAACATTC
ACCTACTGCAGCGACCTAAGCAACAAATCCATCTTCCTGCACAGCCCCAC
GCTCGGCGGCCGCTACGACAACATGGACATAGACTGCGACGGGGCGAACT
CTCACGGCGGGAACTGCGGCTACGACGAGTCCATCCAAGACCAAACGAGC
TTCAAAGATCTTGTTGTATCTCAGTACGGGATCCCCGATCTGGACGCCAA
TATACATCCGTATGTGGTCTTCGGGAATACGGATTATGATCCCCAGAGGG
ATGGCATGTGGCCGTTGAGTGTTATGGTTGTGGTTTGTGGGAATCAGCTT
GTGAGTGGTCCCCTCCGGAGGAGTGGTTTGTTGTGTAAGGGGGGAGACGG
GTTGCTGATGAGAAGGGATCATACTAGTTTTATGGAATCTGGGGCGATAC
GGCTGGGGGGAGTTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGTTGT
GTTTTCCTGATGATGGGATGAGTGGGGATAATGGGCATGTTGGGGATGAT
GTCCTGTATATTGGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAGGGC
GAATTGGAAGGCTGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCGGAT
TGGGGGAGAGGTTGGTTGCGACGCTTACTTAG
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Coding sequence (CDS) from alignment at MCQH01000240:316260..317141+

>ATCC10864_010643-T1 ID=ATCC10864_010643-T1|Name=ATCC10864_010643-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2205bp|location=Sequence derived from alignment at MCQH01000240:316260..317141+ (Aspergillus niger ATCC 10864)
ATGCACCTCCTAACCACCCTCCTCCTATCCACCACCACCACCATCACCAC
CCTCCTAGCAACCGCCTACTCCATCCCCCCCAACCTATCCGCCCTCTACA
ACAAACACAAGTCCAAACCGTGCCTCCACCCCCTCGCCACCGGCTTCCAC
GACGGCCAAAACCCCACCGATTCAACATTCACCTACTGCAGCGACCTAAG
CAACAAATCCATCTTCCTGCACAGCCCCACGCTCGGCGGCCGCTACGACA
ACATGGACATAGACTGCGACGGGGCGAACTCTCACGGCGGGAACTGCGGC
TACGACGAGTCCATCCAAGACCAAACGAGCTTCAAAGATCTTGTTGTATC
TCAGTACGGGATCCCCGATCTGGACGCCAATATACATCCGTATGTGGTCT
TCGGGAATACGGATTATGATCCCCAGAGGGATGGCATGTGGCCGTTGAGT
GTTATGGTTGTGGTTTGTGGGAATCAGCTTTTTTATGGAATCTGGGGCGA
TACGGCTGGGGGGAGTTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGT
TGTGTTTTCCTGATGATGGGATGAGTGGGGATAATGGGCATGTTGGGGAT
GATGTCCTGTATATTGGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAG
GGCGAATTGGAAGGCTGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCG
GATTGGGGGAGAGGTTGGTTGCGACGCTTACTTAGATGCACCTCCTAACC
ACCCTCCTCCTATCCACCACCACCACCATCACCACCCTCCTAGCAACCGC
CTACTCCATCCCCCCCAACCTATCCGCCCTCTACAACAAACACAAGTCCA
AACCGTGCCTCCACCCCCTCGCCACCGGCTTCCACGACGGCCAAAACCCC
ACCGATTCAACATTCACCTACTGCAGCGACCTAAGCAACAAATCCATCTT
CCTGCACAGCCCCACGCTCGGCGGCCGCTACGACAACATGGACATAGACT
GCGACGGGGCGAACTCTCACGGCGGGAACTGCGGCTACGACGAGTCCATC
CAAGACCAAACGAGCTTCAAAGATCTTGTTGTATCTCAGTACGGGATCCC
CGATCTGGACGCCAATATACATCCGTATGTGGTCTTCGGGAATACGGATT
ATGATCCCCAGAGGGATGGCATGTGGCCGTTGAGTGTTATGGTTGTGGTT
TGTGGGAATCAGCTTTTTTATGGAATCTGGGGCGATACGGCTGGGGGGAG
TTGGACGGGAGAGGCGTCGATTGCGTTGGCTAAGTTGTGTTTTCCTGATG
ATGGGATGAGTGGGGATAATGGGCATGTTGGGGATGATGTCCTGTATATT
GGGTTTGTTGGGAGGGAGGCGGTTCCTGGGGGGAGGGCGAATTGGAAGGC
TGGGAGTACGTGGGAGTTTGAGGAAAGTATTCGCGGATTGGGGGAGAGGT
TGGTTGCGACGCTTACTTAGATGCACCTCCTAACCACCCTCCTCCTATCC
ACCACCACCACCATCACCACCCTCCTAGCAACCGCCTACTCCATCCCCCC
CAACCTATCCGCCCTCTACAACAAACACAAGTCCAAACCGTGCCTCCACC
CCCTCGCCACCGGCTTCCACGACGGCCAAAACCCCACCGATTCAACATTC
ACCTACTGCAGCGACCTAAGCAACAAATCCATCTTCCTGCACAGCCCCAC
GCTCGGCGGCCGCTACGACAACATGGACATAGACTGCGACGGGGCGAACT
CTCACGGCGGGAACTGCGGCTACGACGAGTCCATCCAAGACCAAACGAGC
TTCAAAGATCTTGTTGTATCTCAGTACGGGATCCCCGATCTGGACGCCAA
TATACATCCGTATGTGGTCTTCGGGAATACGGATTATGATCCCCAGAGGG
ATGGCATGTGGCCGTTGAGTGTTATGGTTGTGGTTTGTGGGAATCAGCTT
TTTTATGGAATCTGGGGCGATACGGCTGGGGGGAGTTGGACGGGAGAGGC
GTCGATTGCGTTGGCTAAGTTGTGTTTTCCTGATGATGGGATGAGTGGGG
ATAATGGGCATGTTGGGGATGATGTCCTGTATATTGGGTTTGTTGGGAGG
GAGGCGGTTCCTGGGGGGAGGGCGAATTGGAAGGCTGGGAGTACGTGGGA
GTTTGAGGAAAGTATTCGCGGATTGGGGGAGAGGTTGGTTGCGACGCTTA
CTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016977chitosanase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010643ATCC10864_010643Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010643-T1.exon1ATCC10864_010643-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010643-T1.exon2ATCC10864_010643-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010643-T1.exon3ATCC10864_010643-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010643-T1.cdsATCC10864_010643-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010643-T1ATCC10864_010643-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009939
PFAMPF07335
Properties
Property NameValue
NoteSECRETED:SignalP(1-24)
NoteCAZy:GH75
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:316260..317141 +
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