|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000245:53829..56487- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010686-T1 ID=ATCC10864_010686-T1|Name=ATCC10864_010686-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2659bp|location=Sequence derived from alignment at MCQH01000245:53829..56487- (Aspergillus niger ATCC 10864)
ATGTCCTTCTTCGGTTTCAATACCACCCTGCCTAGGGATCGAGCTCCTGC
GGGCGAACAGAGGGGTATCTTCGACACCCCTGATCCGTTCGCCGAAGTCG
CCCGCGCCAGACTGGCAGCAAACTTCCAAAGCGGCGAGGATGACGACGTG
TAAGTTTCCCTCACTTTGCCTCAATGAATTCAATTGAGACAACTCGGGGG
CATATCGCTGACCAGTGGCTTTTTCTTTGATCACTATAGCATCGACTTTG
AGGATACGTACGACGGCCTGGGAGACCAACTGGACGATGACCAGGATGCG
TTCAACGATGACACGTTTGGTGGCGGCTTCGACACCGGCCCGGTTGGAAA
GGATTTCGACTTCTTCGGAAAGACTGCTCAGGTCGCCGATGTAATCGGGG
AGGAGCAGATCCGCTACAGCCTTCAGAAACCCGGTGCGCCTGCGACCGCG
CCTTCGCAGCCCAGCGCCGATACTGCTCTGCCGGACACTACGGCCCAGAA
GCCCAAACGGTCTGGCTATGAGAAGTACAACGACCCGGGTTACATCCCCG
ACCTTCAGGCCAAGTCTAGCGTCTGGGGCATGTCGAAGAAGCCGGAACAG
CAGCTCCAGCAACAGCAGCTCCAGCAACAGCTACAACAGCTACAGCAGCC
CACGCCTCAGATGGTAGCGCAAGCGAAGAAGATGCTGAGTCTCGAGGAGG
TGGAAGCGCAGCTGCGGAGACAGGGTCCGACTTCGCTGCCCGCCCAAATC
CCGCTGTCCCTTCCGCAGTCGATGCCAGAGCCCACTCAGCCTCTCCAGCG
AGCTCAGATGCCCCCTCTGCCCGAAGGCTTCCCGCAGCTGCCGCCTGAGA
TTCTACAGGCCCAGTTCGCCAAGGGAGTGCCACCGGCGCAGTTGTTGCAC
CAGCCACCCATGGTTCCAGAGCCGTATCCGCTTCCTCCAAATCTGCCGAT
ACATATGCTGCAAAATGCCAACTTGCCGCCTCAGCACATGGTGCCTCCCC
AACGTCAGGCGATGCCACCGGCGGCTCAGCGACCCCAGCAGCAGCAACCG
CCCCTACCTCAAGCTCCCCGTGGTAACAACGCGCAATTGCCAGTGATTAC
CAACTCTCAGCAGTTGATGCACCTGACGGAAGAGCAGCGCGTAGCGTACC
TGATGGAAGATGCCAAGCGTGCGAAGCGCAACCACAAGATCTTCCTTCTA
TCCAGGGGCAACGGGCTGATGACCCCGCAAGACAAGAACTTCATCACCCG
AATCCAGCTTCAGCAACTAGTCGCTGCTGCTGGCAACGTGGCGGACTCTG
ATGCAGAAGCGGTCTTGGCAGAGGACTTCTACTATCAGGTTTACAGCCAG
ATCCGGGGTGCGCCGCGGCAACACCCACACCAACCTCTCGGTCACTTTGC
GCAGACATACCTCCTCCAGACAGGCAACAGACTCGGGGGCCATGGCTCTC
GCCGGCAGTTTCAGAGCGCCGACAATCACATGCAGAGAATGCAGCAGCAG
GTCCAGCGTGCGGTGGAGGCCGCTAAGCAGAAGCCTAAGAACAAGCAGCT
TATCATTGAGGGCAGCTTGGGTAAGATTTCTTTCAGCAACGCCAAGACGC
CAAAGCCCATGCTCAACATCAAGCGTCCGGAGAGCTCGGAAGGCGTTAAG
ACGGTGAAAAAGCCTCACACCGATTTGAGTGTTAGCGACCGCAAATCAGT
CCTGACCAACCTTGAGAGCGTTTACAGCACGCTTATGGATATGGAGGACA
TGGAGCGCACGATGCCTCCCCCGCCAGATGAGAATGATCCCGAGGCCATT
CAGAAGCACATGGAATGGAGACAGAAGATCCGCTCGCTCAACCAGAAGTT
GTGGCGCGACCTTAAGGTCATGGAACCCATTGTCCCCAACACCAACACTC
CCCATCCGTTCATTGCCTTCCTTGCTTATCCCAAGGGCAAGAAGGCCATC
CCCCGCATTTTCCGCCACATTGATCAGGAGCAGCGTGTTACTATTCTTAC
TATGATCGTTGTGCACTTGGATTCTCTGGACGTCGTCCGGCGCGCCCAGC
CTGTTCCGGGTGAGACCCAGCCCTCTCTGGCCGTTCGGGAAGCCATTGAG
CTTTTCTCTCAGGCCGTCATGCCCAGTCTTCTGGGGTACGTCAACGAGGC
GCCATTCAATATTATCATTGGCTTGCTGGGACTTGTCATTGCGCAGACGC
ATGTCCAGATGATCGCGAGGACCCGCATTGGACTTGGAATCTTGACCATG
CTTCTCAGTCGGGCCGAAATCGTGAAGGAGGCTGGACAGGCTACGGAGCG
GGACTGGCAGCAGTGGGTTGAGAAGTTCAATGTGCTGTTTGACACCCTTG
AACCTACGTTTGCAGATATCTTCCCCAGCTCGATCAATGCTGGCGACGAC
ATGTATGTGTGGCAGTTCTTGGCTGCAGTTGGTATCGGAGCTAGCCCCGA
ACAACAGCAACGCCTTGTTATTGCGGTTAAGTAAGTGCAACCTCTCGTTT
ACAATTATTTACATTGATACTAACCGTTCTACCAGGGACCGGGTGATGGA
GACGGTGACTTACAGCAAGACGCTTCCTGCCGATATGGCCAGTGCGCGTC
TTGGCAACGTCAACCTTTTCATGCGGGCTATTGGCCTCGATGTCGAACTT
CTAGGTTAA back to topCoding sequence (CDS) from alignment at MCQH01000245:53829..56487- >ATCC10864_010686-T1 ID=ATCC10864_010686-T1|Name=ATCC10864_010686-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7542bp|location=Sequence derived from alignment at MCQH01000245:53829..56487- (Aspergillus niger ATCC 10864)
GGACCGGGTGATGGAGACGGTGACTTACAGCAAGACGCTTCCTGCCGATA
TGGCCAGTGCGCGTCTTGGCAACGTCAACCTTTTCATGCGGGCTATTGGC
CTCGATGTCGAACTTCTAGGTTAACATCGACTTTGAGGATACGTACGACG
GCCTGGGAGACCAACTGGACGATGACCAGGATGCGTTCAACGATGACACG
TTTGGTGGCGGCTTCGACACCGGCCCGGTTGGAAAGGATTTCGACTTCTT
CGGAAAGACTGCTCAGGTCGCCGATGTAATCGGGGAGGAGCAGATCCGCT
ACAGCCTTCAGAAACCCGGTGCGCCTGCGACCGCGCCTTCGCAGCCCAGC
GCCGATACTGCTCTGCCGGACACTACGGCCCAGAAGCCCAAACGGTCTGG
CTATGAGAAGTACAACGACCCGGGTTACATCCCCGACCTTCAGGCCAAGT
CTAGCGTCTGGGGCATGTCGAAGAAGCCGGAACAGCAGCTCCAGCAACAG
CAGCTCCAGCAACAGCTACAACAGCTACAGCAGCCCACGCCTCAGATGGT
AGCGCAAGCGAAGAAGATGCTGAGTCTCGAGGAGGTGGAAGCGCAGCTGC
GGAGACAGGGTCCGACTTCGCTGCCCGCCCAAATCCCGCTGTCCCTTCCG
CAGTCGATGCCAGAGCCCACTCAGCCTCTCCAGCGAGCTCAGATGCCCCC
TCTGCCCGAAGGCTTCCCGCAGCTGCCGCCTGAGATTCTACAGGCCCAGT
TCGCCAAGGGAGTGCCACCGGCGCAGTTGTTGCACCAGCCACCCATGGTT
CCAGAGCCGTATCCGCTTCCTCCAAATCTGCCGATACATATGCTGCAAAA
TGCCAACTTGCCGCCTCAGCACATGGTGCCTCCCCAACGTCAGGCGATGC
CACCGGCGGCTCAGCGACCCCAGCAGCAGCAACCGCCCCTACCTCAAGCT
CCCCGTGGTAACAACGCGCAATTGCCAGTGATTACCAACTCTCAGCAGTT
GATGCACCTGACGGAAGAGCAGCGCGTAGCGTACCTGATGGAAGATGCCA
AGCGTGCGAAGCGCAACCACAAGATCTTCCTTCTATCCAGGGGCAACGGG
CTGATGACCCCGCAAGACAAGAACTTCATCACCCGAATCCAGCTTCAGCA
ACTAGTCGCTGCTGCTGGCAACGTGGCGGACTCTGATGCAGAAGCGGTCT
TGGCAGAGGACTTCTACTATCAGGTTTACAGCCAGATCCGGGGTGCGCCG
CGGCAACACCCACACCAACCTCTCGGTCACTTTGCGCAGACATACCTCCT
CCAGACAGGCAACAGACTCGGGGGCCATGGCTCTCGCCGGCAGTTTCAGA
GCGCCGACAATCACATGCAGAGAATGCAGCAGCAGGTCCAGCGTGCGGTG
GAGGCCGCTAAGCAGAAGCCTAAGAACAAGCAGCTTATCATTGAGGGCAG
CTTGGGTAAGATTTCTTTCAGCAACGCCAAGACGCCAAAGCCCATGCTCA
ACATCAAGCGTCCGGAGAGCTCGGAAGGCGTTAAGACGGTGAAAAAGCCT
CACACCGATTTGAGTGTTAGCGACCGCAAATCAGTCCTGACCAACCTTGA
GAGCGTTTACAGCACGCTTATGGATATGGAGGACATGGAGCGCACGATGC
CTCCCCCGCCAGATGAGAATGATCCCGAGGCCATTCAGAAGCACATGGAA
TGGAGACAGAAGATCCGCTCGCTCAACCAGAAGTTGTGGCGCGACCTTAA
GGTCATGGAACCCATTGTCCCCAACACCAACACTCCCCATCCGTTCATTG
CCTTCCTTGCTTATCCCAAGGGCAAGAAGGCCATCCCCCGCATTTTCCGC
CACATTGATCAGGAGCAGCGTGTTACTATTCTTACTATGATCGTTGTGCA
CTTGGATTCTCTGGACGTCGTCCGGCGCGCCCAGCCTGTTCCGGGTGAGA
CCCAGCCCTCTCTGGCCGTTCGGGAAGCCATTGAGCTTTTCTCTCAGGCC
GTCATGCCCAGTCTTCTGGGGTACGTCAACGAGGCGCCATTCAATATTAT
CATTGGCTTGCTGGGACTTGTCATTGCGCAGACGCATGTCCAGATGATCG
CGAGGACCCGCATTGGACTTGGAATCTTGACCATGCTTCTCAGTCGGGCC
GAAATCGTGAAGGAGGCTGGACAGGCTACGGAGCGGGACTGGCAGCAGTG
GGTTGAGAAGTTCAATGTGCTGTTTGACACCCTTGAACCTACGTTTGCAG
ATATCTTCCCCAGCTCGATCAATGCTGGCGACGACATGTATGTGTGGCAG
TTCTTGGCTGCAGTTGGTATCGGAGCTAGCCCCGAACAACAGCAACGCCT
TGTTATTGCGGTTAAATGTCCTTCTTCGGTTTCAATACCACCCTGCCTAG
GGATCGAGCTCCTGCGGGCGAACAGAGGGGTATCTTCGACACCCCTGATC
CGTTCGCCGAAGTCGCCCGCGCCAGACTGGCAGCAAACTTCCAAAGCGGC
GAGGATGACGACGTGGACCGGGTGATGGAGACGGTGACTTACAGCAAGAC
GCTTCCTGCCGATATGGCCAGTGCGCGTCTTGGCAACGTCAACCTTTTCA
TGCGGGCTATTGGCCTCGATGTCGAACTTCTAGGTTAACATCGACTTTGA
GGATACGTACGACGGCCTGGGAGACCAACTGGACGATGACCAGGATGCGT
TCAACGATGACACGTTTGGTGGCGGCTTCGACACCGGCCCGGTTGGAAAG
GATTTCGACTTCTTCGGAAAGACTGCTCAGGTCGCCGATGTAATCGGGGA
GGAGCAGATCCGCTACAGCCTTCAGAAACCCGGTGCGCCTGCGACCGCGC
CTTCGCAGCCCAGCGCCGATACTGCTCTGCCGGACACTACGGCCCAGAAG
CCCAAACGGTCTGGCTATGAGAAGTACAACGACCCGGGTTACATCCCCGA
CCTTCAGGCCAAGTCTAGCGTCTGGGGCATGTCGAAGAAGCCGGAACAGC
AGCTCCAGCAACAGCAGCTCCAGCAACAGCTACAACAGCTACAGCAGCCC
ACGCCTCAGATGGTAGCGCAAGCGAAGAAGATGCTGAGTCTCGAGGAGGT
GGAAGCGCAGCTGCGGAGACAGGGTCCGACTTCGCTGCCCGCCCAAATCC
CGCTGTCCCTTCCGCAGTCGATGCCAGAGCCCACTCAGCCTCTCCAGCGA
GCTCAGATGCCCCCTCTGCCCGAAGGCTTCCCGCAGCTGCCGCCTGAGAT
TCTACAGGCCCAGTTCGCCAAGGGAGTGCCACCGGCGCAGTTGTTGCACC
AGCCACCCATGGTTCCAGAGCCGTATCCGCTTCCTCCAAATCTGCCGATA
CATATGCTGCAAAATGCCAACTTGCCGCCTCAGCACATGGTGCCTCCCCA
ACGTCAGGCGATGCCACCGGCGGCTCAGCGACCCCAGCAGCAGCAACCGC
CCCTACCTCAAGCTCCCCGTGGTAACAACGCGCAATTGCCAGTGATTACC
AACTCTCAGCAGTTGATGCACCTGACGGAAGAGCAGCGCGTAGCGTACCT
GATGGAAGATGCCAAGCGTGCGAAGCGCAACCACAAGATCTTCCTTCTAT
CCAGGGGCAACGGGCTGATGACCCCGCAAGACAAGAACTTCATCACCCGA
ATCCAGCTTCAGCAACTAGTCGCTGCTGCTGGCAACGTGGCGGACTCTGA
TGCAGAAGCGGTCTTGGCAGAGGACTTCTACTATCAGGTTTACAGCCAGA
TCCGGGGTGCGCCGCGGCAACACCCACACCAACCTCTCGGTCACTTTGCG
CAGACATACCTCCTCCAGACAGGCAACAGACTCGGGGGCCATGGCTCTCG
CCGGCAGTTTCAGAGCGCCGACAATCACATGCAGAGAATGCAGCAGCAGG
TCCAGCGTGCGGTGGAGGCCGCTAAGCAGAAGCCTAAGAACAAGCAGCTT
ATCATTGAGGGCAGCTTGGGTAAGATTTCTTTCAGCAACGCCAAGACGCC
AAAGCCCATGCTCAACATCAAGCGTCCGGAGAGCTCGGAAGGCGTTAAGA
CGGTGAAAAAGCCTCACACCGATTTGAGTGTTAGCGACCGCAAATCAGTC
CTGACCAACCTTGAGAGCGTTTACAGCACGCTTATGGATATGGAGGACAT
GGAGCGCACGATGCCTCCCCCGCCAGATGAGAATGATCCCGAGGCCATTC
AGAAGCACATGGAATGGAGACAGAAGATCCGCTCGCTCAACCAGAAGTTG
TGGCGCGACCTTAAGGTCATGGAACCCATTGTCCCCAACACCAACACTCC
CCATCCGTTCATTGCCTTCCTTGCTTATCCCAAGGGCAAGAAGGCCATCC
CCCGCATTTTCCGCCACATTGATCAGGAGCAGCGTGTTACTATTCTTACT
ATGATCGTTGTGCACTTGGATTCTCTGGACGTCGTCCGGCGCGCCCAGCC
TGTTCCGGGTGAGACCCAGCCCTCTCTGGCCGTTCGGGAAGCCATTGAGC
TTTTCTCTCAGGCCGTCATGCCCAGTCTTCTGGGGTACGTCAACGAGGCG
CCATTCAATATTATCATTGGCTTGCTGGGACTTGTCATTGCGCAGACGCA
TGTCCAGATGATCGCGAGGACCCGCATTGGACTTGGAATCTTGACCATGC
TTCTCAGTCGGGCCGAAATCGTGAAGGAGGCTGGACAGGCTACGGAGCGG
GACTGGCAGCAGTGGGTTGAGAAGTTCAATGTGCTGTTTGACACCCTTGA
ACCTACGTTTGCAGATATCTTCCCCAGCTCGATCAATGCTGGCGACGACA
TGTATGTGTGGCAGTTCTTGGCTGCAGTTGGTATCGGAGCTAGCCCCGAA
CAACAGCAACGCCTTGTTATTGCGGTTAAATGTCCTTCTTCGGTTTCAAT
ACCACCCTGCCTAGGGATCGAGCTCCTGCGGGCGAACAGAGGGGTATCTT
CGACACCCCTGATCCGTTCGCCGAAGTCGCCCGCGCCAGACTGGCAGCAA
ACTTCCAAAGCGGCGAGGATGACGACGTGGACCGGGTGATGGAGACGGTG
ACTTACAGCAAGACGCTTCCTGCCGATATGGCCAGTGCGCGTCTTGGCAA
CGTCAACCTTTTCATGCGGGCTATTGGCCTCGATGTCGAACTTCTAGGTT
AACATCGACTTTGAGGATACGTACGACGGCCTGGGAGACCAACTGGACGA
TGACCAGGATGCGTTCAACGATGACACGTTTGGTGGCGGCTTCGACACCG
GCCCGGTTGGAAAGGATTTCGACTTCTTCGGAAAGACTGCTCAGGTCGCC
GATGTAATCGGGGAGGAGCAGATCCGCTACAGCCTTCAGAAACCCGGTGC
GCCTGCGACCGCGCCTTCGCAGCCCAGCGCCGATACTGCTCTGCCGGACA
CTACGGCCCAGAAGCCCAAACGGTCTGGCTATGAGAAGTACAACGACCCG
GGTTACATCCCCGACCTTCAGGCCAAGTCTAGCGTCTGGGGCATGTCGAA
GAAGCCGGAACAGCAGCTCCAGCAACAGCAGCTCCAGCAACAGCTACAAC
AGCTACAGCAGCCCACGCCTCAGATGGTAGCGCAAGCGAAGAAGATGCTG
AGTCTCGAGGAGGTGGAAGCGCAGCTGCGGAGACAGGGTCCGACTTCGCT
GCCCGCCCAAATCCCGCTGTCCCTTCCGCAGTCGATGCCAGAGCCCACTC
AGCCTCTCCAGCGAGCTCAGATGCCCCCTCTGCCCGAAGGCTTCCCGCAG
CTGCCGCCTGAGATTCTACAGGCCCAGTTCGCCAAGGGAGTGCCACCGGC
GCAGTTGTTGCACCAGCCACCCATGGTTCCAGAGCCGTATCCGCTTCCTC
CAAATCTGCCGATACATATGCTGCAAAATGCCAACTTGCCGCCTCAGCAC
ATGGTGCCTCCCCAACGTCAGGCGATGCCACCGGCGGCTCAGCGACCCCA
GCAGCAGCAACCGCCCCTACCTCAAGCTCCCCGTGGTAACAACGCGCAAT
TGCCAGTGATTACCAACTCTCAGCAGTTGATGCACCTGACGGAAGAGCAG
CGCGTAGCGTACCTGATGGAAGATGCCAAGCGTGCGAAGCGCAACCACAA
GATCTTCCTTCTATCCAGGGGCAACGGGCTGATGACCCCGCAAGACAAGA
ACTTCATCACCCGAATCCAGCTTCAGCAACTAGTCGCTGCTGCTGGCAAC
GTGGCGGACTCTGATGCAGAAGCGGTCTTGGCAGAGGACTTCTACTATCA
GGTTTACAGCCAGATCCGGGGTGCGCCGCGGCAACACCCACACCAACCTC
TCGGTCACTTTGCGCAGACATACCTCCTCCAGACAGGCAACAGACTCGGG
GGCCATGGCTCTCGCCGGCAGTTTCAGAGCGCCGACAATCACATGCAGAG
AATGCAGCAGCAGGTCCAGCGTGCGGTGGAGGCCGCTAAGCAGAAGCCTA
AGAACAAGCAGCTTATCATTGAGGGCAGCTTGGGTAAGATTTCTTTCAGC
AACGCCAAGACGCCAAAGCCCATGCTCAACATCAAGCGTCCGGAGAGCTC
GGAAGGCGTTAAGACGGTGAAAAAGCCTCACACCGATTTGAGTGTTAGCG
ACCGCAAATCAGTCCTGACCAACCTTGAGAGCGTTTACAGCACGCTTATG
GATATGGAGGACATGGAGCGCACGATGCCTCCCCCGCCAGATGAGAATGA
TCCCGAGGCCATTCAGAAGCACATGGAATGGAGACAGAAGATCCGCTCGC
TCAACCAGAAGTTGTGGCGCGACCTTAAGGTCATGGAACCCATTGTCCCC
AACACCAACACTCCCCATCCGTTCATTGCCTTCCTTGCTTATCCCAAGGG
CAAGAAGGCCATCCCCCGCATTTTCCGCCACATTGATCAGGAGCAGCGTG
TTACTATTCTTACTATGATCGTTGTGCACTTGGATTCTCTGGACGTCGTC
CGGCGCGCCCAGCCTGTTCCGGGTGAGACCCAGCCCTCTCTGGCCGTTCG
GGAAGCCATTGAGCTTTTCTCTCAGGCCGTCATGCCCAGTCTTCTGGGGT
ACGTCAACGAGGCGCCATTCAATATTATCATTGGCTTGCTGGGACTTGTC
ATTGCGCAGACGCATGTCCAGATGATCGCGAGGACCCGCATTGGACTTGG
AATCTTGACCATGCTTCTCAGTCGGGCCGAAATCGTGAAGGAGGCTGGAC
AGGCTACGGAGCGGGACTGGCAGCAGTGGGTTGAGAAGTTCAATGTGCTG
TTTGACACCCTTGAACCTACGTTTGCAGATATCTTCCCCAGCTCGATCAA
TGCTGGCGACGACATGTATGTGTGGCAGTTCTTGGCTGCAGTTGGTATCG
GAGCTAGCCCCGAACAACAGCAACGCCTTGTTATTGCGGTTAAATGTCCT
TCTTCGGTTTCAATACCACCCTGCCTAGGGATCGAGCTCCTGCGGGCGAA
CAGAGGGGTATCTTCGACACCCCTGATCCGTTCGCCGAAGTCGCCCGCGC
CAGACTGGCAGCAAACTTCCAAAGCGGCGAGGATGACGACGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF09770 |
| InterPro | IPR019167 |
| InterPro | IPR039900 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260S3L |
| Note | antiSMASH:Cluster_1000245.1 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000245 | supercontig | MCQH01000245:53829..56487 - |
|
