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ATCC10864_010701-T1, ATCC10864_010701-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010701-T1
Unique NameATCC10864_010701-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000245:94159..95723-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010701-T1 ID=ATCC10864_010701-T1|Name=ATCC10864_010701-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1565bp|location=Sequence derived from alignment at MCQH01000245:94159..95723- (Aspergillus niger ATCC 10864)
ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAA CCTCACCCGAACAACCCGCCCAGTCCAACGACGACCGCTCCTGCCCGCCG TTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAA AGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGATGCAAGCCCAGTCATAG CTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCA GCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAGCGAGGCCAATGGAAAGG GATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGGTCACAA TTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAACATTTT CGTGGCAGGACAGCGATTGAATGATCTTACGGGCTATTCGGCGATCGAAA TGTTGAAGAAGGAGATTCATAGACAAGGTATGTGGCACCCATATTCCATA ACTTAATCATTAGAACTATTGTTTCTAACCTTTGACATGGGTGAATAGAG GAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCCTA CGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGAGC TTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACC CACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCACA GGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACAAT TGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGAC AAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTCAA CGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCGCA AGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAG GAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATGGC GCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGACCG CTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCA ATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAGGT ATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGTCA GCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCG CGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTCTT CAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGCTC TGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATT ATTCGGCAACGGTGA
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Coding sequence (CDS) from alignment at MCQH01000245:94159..95723-

>ATCC10864_010701-T1 ID=ATCC10864_010701-T1|Name=ATCC10864_010701-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2988bp|location=Sequence derived from alignment at MCQH01000245:94159..95723- (Aspergillus niger ATCC 10864)
AGGAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCC
TACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGA
GCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCA
CCCACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCA
CAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACA
ATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGG
ACAAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTC
AACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCG
CAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGA
AGGAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATG
GCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGAC
CGCTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGC
CAATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAG
GTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGT
CAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCG
CGCGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTC
TTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGC
TCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGA
TTATTCGGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCC
TTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACG
ACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGA
ACTTCTCCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTAC
TCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGA
TGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCG
ATGCGGGGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAA
AGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAG
CGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAG
AGCAACGCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATGGACAAC
CTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCTTACGGG
CTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCATAGACAAGAGGAGC
GACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCCTACGCA
GCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGAGCTTCT
CCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACCCACC
TCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCACAGGAG
GCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACAATTGAG
CAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGACAAGA
TCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTCAACGTT
CTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCGCAAGAG
ACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAGGAAA
AGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATGGCGCAG
GAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGACCGCTGA
GACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCAATCG
CTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAGGTATTT
AGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGTCAGCAA
ACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCGCGCG
TCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTCTTCAGT
GACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGCTCTGCA
AAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATTATTC
GGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAA
TCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACGACCGCT
CCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCT
CCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCT
GATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGATGCAAG
CCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGG
GGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACA
CAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAGCGAGGC
CAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAAC
GCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAG
TCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCTTACGGGCTATTC
GGCGATCGAAATGTTGAAGAAGGAGATTCATAGACAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SHE9ATCC10864_010701Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010701-T1ATCC10864_010701-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010701-T1.cdsATCC10864_010701-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010701-T1.exon2ATCC10864_010701-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010701-T1.exon1ATCC10864_010701-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008839
PFAMPF05546
Properties
Property NameValue
NoteBUSCO:EOG09264LJU
Productsensitivity to high expression protein she9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000245supercontigMCQH01000245:94159..95723 -