You are here

Home

ATCC10864_010702-T1, ATCC10864_010702-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010702-T1
Unique NameATCC10864_010702-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000245:96305..96835-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010702-T1 ID=ATCC10864_010702-T1|Name=ATCC10864_010702-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=531bp|location=Sequence derived from alignment at MCQH01000245:96305..96835- (Aspergillus niger ATCC 10864)
ATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTTTCTTTCCCCC
AGTCTCGGGTGAGTATTGATCGCACATTGAATTGCATTTGCGAGAGGACG
CATGCTAACCGACTGGCTCAGTGTGGATCAAAGTAGGCATTTGCACGGCC
GATTCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCT
TTTACACGCCTGGTACATTATACTCAAGTACCCCGAACCAGATTACGATG
ACCCTAGCTACGAACCTCTCCCTGGCGATGCGGAAAACGGTCGCGTAACA
TATTACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTA
TGGTACTTTGCCGCCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGA
ACCGGCAGCCTACTCCGAATCACTCTCAGGAACAAGCCCAAGCTGGCAGC
AGCAGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGC
CGTGAAGGGAGACCATAAAGTGCAGGACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000245:96305..96835-

>ATCC10864_010702-T1 ID=ATCC10864_010702-T1|Name=ATCC10864_010702-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=936bp|location=Sequence derived from alignment at MCQH01000245:96305..96835- (Aspergillus niger ATCC 10864)
TGTGGATCAAAGTAGGCATTTGCACGGCCGATTCCATCATCAACCTTGCT
CTCTGCTGCCTTGGCTACGTGCCCGGGCTTTTACACGCCTGGTACATTAT
ACTCAAGTACCCCGAACCAGATTACGATGACCCTAGCTACGAACCTCTCC
CTGGCGATGCGGAAAACGGTCGCGTAACATATTACTATGTTTCCCACCAG
CCGATCCAGCATCCCTCCCAGAGGGGCTATGGTACTTTGCCGCCACAACA
GCCCCAAGCAGCAAACGCCCCGCCACAGAACCGGCAGCCTACTCCGAATC
ACTCTCAGGAACAAGCCCAAGCTGGCAGCAGCAGCCAGGAACATCATGAT
AGTCGCCCACCTCCTACCTATGCTGAGGCCGTGAAGGGAGACCATAAAGT
GCAGGACTGAATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTT
TCTTTCCCCCAGTCTCGGTGTGGATCAAAGTAGGCATTTGCACGGCCGAT
TCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCTTTT
ACACGCCTGGTACATTATACTCAAGTACCCCGAACCAGATTACGATGACC
CTAGCTACGAACCTCTCCCTGGCGATGCGGAAAACGGTCGCGTAACATAT
TACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTATGG
TACTTTGCCGCCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGAACC
GGCAGCCTACTCCGAATCACTCTCAGGAACAAGCCCAAGCTGGCAGCAGC
AGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGCCGT
GAAGGGAGACCATAAAGTGCAGGACTGAATGTGTGGTTCAGACATCTTTC
TAGCGATTCTCGCGGTTTTCTTTCCCCCAGTCTCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010702ATCC10864_010702Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010702-T1ATCC10864_010702-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010702-T1.cdsATCC10864_010702-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010702-T1.exon2ATCC10864_010702-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010702-T1.exon1ATCC10864_010702-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000612
PFAMPF01679
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000245supercontigMCQH01000245:96305..96835 -
Powered by Drupal