You are here

Home

ATCC10864_010722-T1, ATCC10864_010722-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010722-T1
Unique NameATCC10864_010722-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000245:166663..167904+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010722-T1 ID=ATCC10864_010722-T1|Name=ATCC10864_010722-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1242bp|location=Sequence derived from alignment at MCQH01000245:166663..167904+ (Aspergillus niger ATCC 10864)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTATGTTCTATGCGATAGCGA
GGCGGCGCCTCGAGATCATTAAAAGACGGTTGTTGATTGTCATTGCAGGT
TCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGG
AGGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAACAGGAAATGGCGCG
TCGAGCGGGAGTAGTCCCGTTCTCATTATCAAGTACTGCCATAGATCCGC
CAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAA
GGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGA
AGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGG
CCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCAC
AGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTA
GAGGGCATGAAGAAAACGATGTCTATGCCTGTGTGTTTTGCGTTATTACG
AATTGCATAGCGCTGGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTT
GTCATACAAGAGCTCTTCCGAGTGCGTGTGTGCGCGTTTTTCATTATCCT
CATCTGGCTTTGATCTTGCTACACATGAAAGGGCACCTTCGAGAGGAGGC
CTCAATTTGACGAGCCCAATGCTCGTATCGTCGTTCCTGTCGTGAGTGCT
ATGCAGATGTGGATGACGGGCTTCGAGGCTGGCTCTCGATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000245:166663..167904+

>ATCC10864_010722-T1 ID=ATCC10864_010722-T1|Name=ATCC10864_010722-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4332bp|location=Sequence derived from alignment at MCQH01000245:166663..167904+ (Aspergillus niger ATCC 10864)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTTCAAAGCAGAGATGTGGTC
AAAGGTAGCAGAAGAGATGGCCATTCCGTGGAGGGCTGCAGAAGCCATGC
ACTGGCAACTGGGAGAACAGGAAATGGCGCGTCGAGCGGGAATCCGCCAG
CGCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAAGGA
TCGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGA
GCTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGGCCC
CTCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCACAGT
AGCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTAGAG
GGCATGAAGAAAACGATGTCTATGCCTGTGTGTTTTGCGTTATTACGAAT
TGCATAGCGCTGGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTTGTC
ATACAAGAGCTCTTCCGAGTGCGGCACCTTCGAGAGGAGGCCTCAATTTG
ACGAGCCCAATGCTCGTATCGTCGTTCCTGTCGTGAGTGCTATGCAGATG
TGGATGACGGGCTTCGAGGCTGGCTCTCGATGAATGATTGCGTTACAAAA
TCACGCTATCTTACCTCCTCCCGCCAAAGTGGATATCTCACTGCTGCTGA
AGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGACGACAGCGCCTGGCTAC
CCACCCAGCGCAATCCCGCCGCCCTCGGTAGCACCTGCGTTGCCAGTAGC
TGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGTGCCCCAGCTTACGTCTA
AAATTCCGGCTACGGTGCCTGCCAAGCGCCTTCAACCTGCCCACACTGCA
GAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCCCCGGAGGAGGATGCCCT
TATCATCGAGCTACGAGGAAGCGGTATGAAATGGGAGGATATTAGTAAAC
GGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTCTACACTATCAGAATTAC
TTGGAACGCAGAAGTGAGTGGGATGAGGATAAAAAGAACAAACTTGCAAG
GTTATACGAAAGGTTCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGA
TGGCCATTCCGTGGAGGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAA
CAGGAAATGGCGCGTCGAGCGGGAATCCGCCAGCGCCCCGAACTCGCAGA
GCCAGCACGTCTCTATCTCGACCAAGAAAAGGATCGACATCCCGTCCGAT
CCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGAGCTTACCGCTGGAGTGC
CTGCATTTGCACCGCACCCAACTTTTCCGGCCCCTCGCGAACCTTATAGA
TTGGGGCGACCCTTGGATCTGGGTGGTCACAGTAGCCATCTTGGACCCAA
CCTCGGTCTTCCCCCTCGAACCCTCCCGTAGAGGGCATGAAGAAAACGAT
GTCTATGCCTGTGTGTTTTGCGTTATTACGAATTGCATAGCGCTGGTTGG
AGGTATATCTTCTTCACTCATGGGAGGCTTGTCATACAAGAGCTCTTCCG
AGTGCGGCACCTTCGAGAGGAGGCCTCAATTTGACGAGCCCAATGCTCGT
ATCGTCGTTCCTGTCGTGAGTGCTATGCAGATGTGGATGACGGGCTTCGA
GGCTGGCTCTCGATGAATGATTGCGTTACAAAATCACGCTATCTTACCTC
CTCCCGCCAAAGTGGATATCTCACTGCTGCTGAAGCCCCAGGATGAAGAG
GAAGCCGCCTCGGTGACGACAGCGCCTGGCTACCCACCCAGCGCAATCCC
GCCGCCCTCGGTAGCACCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGT
CCTCGGTCCCCCCAGTGCCCCAGCTTACGTCTAAAATTCCGGCTACGGTG
CCTGCCAAGCGCCTTCAACCTGCCCACACTGCAGAGTCGCCGGCTAAAAA
GCAATCCAAGTGGTCCCCGGAGGAGGATGCCCTTATCATCGAGCTACGAG
GAAGCGGTATGAAATGGGAGGATATTAGTAAACGGCTTCCTGGCCGAAGT
GCCATCAGTTGCCGTCTACACTATCAGAATTACTTGGAACGCAGAAGTGA
GTGGGATGAGGATAAAAAGAACAAACTTGCAAGGTTATACGAAAGGTTCA
AAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGGAGG
GCTGCAGAAGCCATGCACTGGCAACTGGGAGAACAGGAAATGGCGCGTCG
AGCGGGAATCCGCCAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATC
TCGACCAAGAAAAGGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAAC
TTCCTTCCGTGGAAGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCAC
CCAACTTTTCCGGCCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGA
TCTGGGTGGTCACAGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTC
GAACCCTCCCGTAGAGGGCATGAAGAAAACGATGTCTATGCCTGTGTGTT
TTGCGTTATTACGAATTGCATAGCGCTGGTTGGAGGTATATCTTCTTCAC
TCATGGGAGGCTTGTCATACAAGAGCTCTTCCGAGTGCGGCACCTTCGAG
AGGAGGCCTCAATTTGACGAGCCCAATGCTCGTATCGTCGTTCCTGTCGT
GAGTGCTATGCAGATGTGGATGACGGGCTTCGAGGCTGGCTCTCGATGAA
TGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGAT
ATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGAC
GACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCAC
CTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGTG
CCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTCA
ACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCCC
CGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATGG
GAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTCT
ACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAAA
AGAACAAACTTGCAAGGTTATACGAAAGGTTCAAAGCAGAGATGTGGTCA
AAGGTAGCAGAAGAGATGGCCATTCCGTGGAGGGCTGCAGAAGCCATGCA
CTGGCAACTGGGAGAACAGGAAATGGCGCGTCGAGCGGGAATCCGCCAGC
GCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAAGGAT
CGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGAG
CTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGGCCCC
TCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCACAGTA
GCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTAGAGG
GCATGAAGAAAACGATGTCTATGCCTGTGTGTTTTGCGTTATTACGAATT
GCATAGCGCTGGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTTGTCA
TACAAGAGCTCTTCCGAGTGCGGCACCTTCGAGAGGAGGCCTCAATTTGA
CGAGCCCAATGCTCGTATCGTCGTTCCTGTCGTGAGTGCTATGCAGATGT
GGATGACGGGCTTCGAGGCTGGCTCTCGATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010722ATCC10864_010722Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010722-T1.exon1ATCC10864_010722-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010722-T1.exon2ATCC10864_010722-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010722-T1.exon3ATCC10864_010722-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010722-T1.exon4ATCC10864_010722-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010722-T1.cdsATCC10864_010722-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010722-T1ATCC10864_010722-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009057
PFAMPF00249
InterProIPR001005
InterProIPR017877
InterProIPR017930
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000245supercontigMCQH01000245:166663..167904 +
Powered by Drupal