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ATCC10864_010723-T1, ATCC10864_010723-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010723-T1
Unique NameATCC10864_010723-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000245:167925..168977-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010723-T1 ID=ATCC10864_010723-T1|Name=ATCC10864_010723-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1053bp|location=Sequence derived from alignment at MCQH01000245:167925..168977- (Aspergillus niger ATCC 10864)
ATGGCTGCCCCGAATGTTCCGGCCCTGGCAAACGTCCCCTCGGATGATCA
GGAAGCGTACGAAGAGAAGAATGTTCATGAAGTGTACCAACAAATTGCCA
GTCATTTTTCCTCCACTCGTTACAAGGTACTACTGCTTCTCACTCCGCCG
AATTCAACCCCTCCTCGATAATTCAATTGCGACCTCGGAATTCTCTGTTA
ACCCTTCAACAGCCTTGGCCCATTGTGGAACAGTTTCTCAGAGGTTTAGA
GCCCGGTTCCGTTGGTTTGGATGTGGGATGCGGCAATGGGAAGTATTTGG
CCGTGAACCGTGAGGTCTTTATTGTTGCTTCCGATAGGTATGTTTCTCTC
CCTTGCACTCCCGGCCATGGAATATTTCGTCTCGTCTTGGCTATTGGCTT
TCAATTTCAGTTTTGTTTCTTTCTATATACTGTATTTCGTATATGGGTAT
TCTCATGTCATTCCTGTCCAAAAGATAAAAAAAAGAAACCTCCCCCTCTC
TGTCGTTGTGCGCAGGCATTCACCTTCCATTGTATTTCAAAGCTGATCAT
TCCATACCAGATCCGCGAATTTGGCTCAAATTGCGCAAAAGCATCAGCCA
CACTCAACCATCATAGCCGATATTCTCCACCTCCCACATCCGGATTCTTT
CTTCGACTTCGCCATTTCAATTGCCGTTATCCACCACCTTTCCACTCCTG
ATCGAAGGGTCCAAGCTATTCGTGAAATCCTGCGCACGCTAAAACCTGCC
ACCAAAAAATCTCCGGGTGGGAGAGCGCTGATCTATGCTTGGGCCCTGGA
ACAGAAAAACAGCCGTCGAGGTTGGGACAAAGGTGATCCGCAAGATATAA
TGGTCCCCTGGGTCATGAAGGGAACCTCTTCCGCGGACGCTCCTTCCGAC
GAGCCAAAGGTATTCCATCGGTATTACCACCTTTATGAGGAGTCGGAGCT
CGAGCAGGATATCAACAAGGCGGGAGGTCATGTCCTGGAGTCGGGATATG
AAAAAGACAACTGGTGGGCGATCGCAGCACGGACAAACTCGGAATCATCA
TGA
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Coding sequence (CDS) from alignment at MCQH01000245:167925..168977-

>ATCC10864_010723-T1 ID=ATCC10864_010723-T1|Name=ATCC10864_010723-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2232bp|location=Sequence derived from alignment at MCQH01000245:167925..168977- (Aspergillus niger ATCC 10864)
ATCCGCGAATTTGGCTCAAATTGCGCAAAAGCATCAGCCACACTCAACCA
TCATAGCCGATATTCTCCACCTCCCACATCCGGATTCTTTCTTCGACTTC
GCCATTTCAATTGCCGTTATCCACCACCTTTCCACTCCTGATCGAAGGGT
CCAAGCTATTCGTGAAATCCTGCGCACGCTAAAACCTGCCACCAAAAAAT
CTCCGGGTGGGAGAGCGCTGATCTATGCTTGGGCCCTGGAACAGAAAAAC
AGCCGTCGAGGTTGGGACAAAGGTGATCCGCAAGATATAATGGTCCCCTG
GGTCATGAAGGGAACCTCTTCCGCGGACGCTCCTTCCGACGAGCCAAAGG
TATTCCATCGGTATTACCACCTTTATGAGGAGTCGGAGCTCGAGCAGGAT
ATCAACAAGGCGGGAGGTCATGTCCTGGAGTCGGGATATGAAAAAGACAA
CTGGTGGGCGATCGCAGCACGGACAAACTCGGAATCATCATGACCTTGGC
CCATTGTGGAACAGTTTCTCAGAGGTTTAGAGCCCGGTTCCGTTGGTTTG
GATGTGGGATGCGGCAATGGGAAGTATTTGGCCGTGAACCGTGAGGTCTT
TATTGTTGCTTCCGATAGATGGCTGCCCCGAATGTTCCGGCCCTGGCAAA
CGTCCCCTCGGATGATCAGGAAGCGTACGAAGAGAAGAATGTTCATGAAG
TGTACCAACAAATTGCCAGTCATTTTTCCTCCACTCGTTACAAGATCCGC
GAATTTGGCTCAAATTGCGCAAAAGCATCAGCCACACTCAACCATCATAG
CCGATATTCTCCACCTCCCACATCCGGATTCTTTCTTCGACTTCGCCATT
TCAATTGCCGTTATCCACCACCTTTCCACTCCTGATCGAAGGGTCCAAGC
TATTCGTGAAATCCTGCGCACGCTAAAACCTGCCACCAAAAAATCTCCGG
GTGGGAGAGCGCTGATCTATGCTTGGGCCCTGGAACAGAAAAACAGCCGT
CGAGGTTGGGACAAAGGTGATCCGCAAGATATAATGGTCCCCTGGGTCAT
GAAGGGAACCTCTTCCGCGGACGCTCCTTCCGACGAGCCAAAGGTATTCC
ATCGGTATTACCACCTTTATGAGGAGTCGGAGCTCGAGCAGGATATCAAC
AAGGCGGGAGGTCATGTCCTGGAGTCGGGATATGAAAAAGACAACTGGTG
GGCGATCGCAGCACGGACAAACTCGGAATCATCATGACCTTGGCCCATTG
TGGAACAGTTTCTCAGAGGTTTAGAGCCCGGTTCCGTTGGTTTGGATGTG
GGATGCGGCAATGGGAAGTATTTGGCCGTGAACCGTGAGGTCTTTATTGT
TGCTTCCGATAGATGGCTGCCCCGAATGTTCCGGCCCTGGCAAACGTCCC
CTCGGATGATCAGGAAGCGTACGAAGAGAAGAATGTTCATGAAGTGTACC
AACAAATTGCCAGTCATTTTTCCTCCACTCGTTACAAGATCCGCGAATTT
GGCTCAAATTGCGCAAAAGCATCAGCCACACTCAACCATCATAGCCGATA
TTCTCCACCTCCCACATCCGGATTCTTTCTTCGACTTCGCCATTTCAATT
GCCGTTATCCACCACCTTTCCACTCCTGATCGAAGGGTCCAAGCTATTCG
TGAAATCCTGCGCACGCTAAAACCTGCCACCAAAAAATCTCCGGGTGGGA
GAGCGCTGATCTATGCTTGGGCCCTGGAACAGAAAAACAGCCGTCGAGGT
TGGGACAAAGGTGATCCGCAAGATATAATGGTCCCCTGGGTCATGAAGGG
AACCTCTTCCGCGGACGCTCCTTCCGACGAGCCAAAGGTATTCCATCGGT
ATTACCACCTTTATGAGGAGTCGGAGCTCGAGCAGGATATCAACAAGGCG
GGAGGTCATGTCCTGGAGTCGGGATATGAAAAAGACAACTGGTGGGCGAT
CGCAGCACGGACAAACTCGGAATCATCATGACCTTGGCCCATTGTGGAAC
AGTTTCTCAGAGGTTTAGAGCCCGGTTCCGTTGGTTTGGATGTGGGATGC
GGCAATGGGAAGTATTTGGCCGTGAACCGTGAGGTCTTTATTGTTGCTTC
CGATAGATGGCTGCCCCGAATGTTCCGGCCCTGGCAAACGTCCCCTCGGA
TGATCAGGAAGCGTACGAAGAGAAGAATGTTCATGAAGTGTACCAACAAA
TTGCCAGTCATTTTTCCTCCACTCGTTACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016300tRNA (uracil) methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010723ATCC10864_010723Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010723-T1ATCC10864_010723-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010723-T1.cdsATCC10864_010723-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010723-T1.exon3ATCC10864_010723-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010723-T1.exon2ATCC10864_010723-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010723-T1.exon1ATCC10864_010723-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13489
InterProIPR032873
InterProIPR029063
InterProIPR013216
PFAMPF13649
PFAMPF08241
Properties
Property NameValue
NoteBUSCO:EOG09264DIM
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000245supercontigMCQH01000245:167925..168977 -
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