|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000246:15847..18176- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010747-T1 ID=ATCC10864_010747-T1|Name=ATCC10864_010747-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2330bp|location=Sequence derived from alignment at MCQH01000246:15847..18176- (Aspergillus niger ATCC 10864)
ATGGCCTCTCTCCTCAAGAAACCATTGAAACTGGCCCTGATCCAACTGGC
CTCAGGTGCGTACGACTGTGATCTCTCTCCGTCCCCGCCTCCCTCACTCC
CTCCAAGTTGGCCCGAAATGAATCCTCAGAGTTGATGATCTTTAGGCGCC
GACAAAACAGTAAACCTCGCACATGCTCGCTCCAAGGTTCTCGAAGCCGC
CAAAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTTTCAACTCTCCCT
ACGGTACTCAATACTTCCCAAAGTACGCCGAGACACTGCTTCCTTCCCCA
CCCACCCAAGAACAGTCCCCTTCCTACCATGCGCTTTCGTCCATCGCCGC
AGAAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGGAACTTGAGCCGA
CCACGAAAAAGTACTACAACACCTCGCTGGTGTTCTCCCCCACCGGTGCC
TTAATTGGAACCCACCGCAAGACTCATCTCTTCGATATCGACATCCCCGG
CAAGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTGGTAACCAGTTGA
CTGTCGTCGATCTGCCGGACTATGGGAAAATCGGACTGGCTATCTGCTAC
GATATCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCGGAAGGGCGCCTT
CATGCTCGTGTACCCGGGCGCATTCAACACCACCACGGGTCCGCTGCACT
GGTCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAGGTGTATGTGGCC
TTGTGCAGTCCCGCTCGAGACATGAGCGCCTCGTACCACGCCTATGGTCA
CAGTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTGAGACGGAGGAGA
AGGAAGACATTATCTACGCGGATCTGGATAACGAGACGATCCAGAACACG
AGGAAGGGTATTCCCATTTACACGCAGCGGCGGTTCGATTTGTACTCGGA
CGTGAGTGCCGACAGCAAATAGCCCTGCATTTCGCATTGAGTCCGATGAA
TATATGCTGCGAGCGAGTCATAGCCTAGATTGTAATTGAACGATTCATGA
ACCTAGTCCGCGACCGTTAGCCTAATTGTCCCGGAAGAGCGTGACAGTCC
ACAGTAGGAGAGTAGGAAAGCAAGCAAGCAAGCCTGAAGCGGGATTGATT
GTTGCCTCAGGCGATGGCACAGTTAGCTGCGGGAAGGTATTCACGTGCTG
GCAAAATGGACGAATCAGGGTGCGCACAGGCGATAAGCGAGCCGCACTGG
AAAACCCACCAGCACTGCGAAAAAACACCATCTCGAAATCTCCTCATCCT
TGACAGTCGACGACCACTGCAGCCCACGACAGCCGACACTTCTGTCCCTC
ATTCAGTGAGTGAGATCTTTCCGCAAATTTTGCCTGAACCTATCATTCTC
TCCGCGAGAATCACCCATCCTAACATTCTTCTCTTAACCACAGAAATGTC
CGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCGCCGACGTTG
TCACTCGCGAGTACACCATCAACATGCACAAGAGAGTACGTTGAACACAG
CCAAAAACATGCACTTGAATTCATCACAATCTCGACTCTACCTGCGAGCG
ATTTCCGCGGAACCTCGAAAACATGGAGGCAATTGGACGGAGAACAAAAA
GACAAGCGGGAACCCGAATCCTCGTTCCTCCGCCCACCTCTACCACTCCC
GAACTCGGAGAACAAGAGTGAAGAAGGAGAGGTTCAGGATGAGCTTACCG
CACCTGTCTGAAAAATTACATGTGTGGAGGAACAATCAGGAACCAGATTG
TCTTTTTTTTTCTGAAAGAGGAAAAAAAAACAAATCCCATAAAAAGAAGA
ATTAGTTTGATGAAGTCCACCTCTATGGCCGCAATTTCGCAAAGCAAAAT
TTCTCAAAATCACATCTATCAGATGGCATTCGGGCGGAAGACTAATATTC
GTTCTTTTTTTGGGTATAGATGCACGGTGTTTCCTTCAAGAAGCGTGCTC
CTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGCTATGGTTAGT
ACCCCCCTTCCCCCCATACTCAAATGGGGGAAAAAAAGAGAAACAACCAC
CTAACGCTATTCTCATTGAATAGGGCACCACCGACGTCCGTGTCGACCCC
CAGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCCTACCG
TCTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGCCAAGG
AGAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCAAGGGT
CTTCACACCGCCGTTGTCGATGAGGAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000246:15847..18176- >ATCC10864_010747-T1 ID=ATCC10864_010747-T1|Name=ATCC10864_010747-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7704bp|location=Sequence derived from alignment at MCQH01000246:15847..18176- (Aspergillus niger ATCC 10864)
GGCACCACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGA
AGCCGGTGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCA
AGCGTAACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAG
GCTGTCAACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGA
GGAGTAAATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCA
AGGAGATCCGCGCTTTCGCCACCCGTGCTATGAAATGTCCGCCCCCGTCA
AGACCGGCAAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAG
TACACCATCAACATGCACAAGAGATCGACGACCACTGCAGCCCACGACAG
CCGACACTTCTGTCCCTCATTCAGCGCCGACAAAACAGTAAACCTCGCAC
ATGCTCGCTCCAAGGTTCTCGAAGCCGCCAAAGCTGGTGCCTCTCTTATC
GTCCTTCCGGAATGTTTCAACTCTCCCTACGGTACTCAATACTTCCCAAA
GTACGCCGAGACACTGCTTCCTTCCCCACCCACCCAAGAACAGTCCCCTT
CCTACCATGCGCTTTCGTCCATCGCCGCAGAAGCCAAGGCCTACTTGGTG
GGTGGTAGCATTCCGGAACTTGAGCCGACCACGAAAAAGTACTACAACAC
CTCGCTGGTGTTCTCCCCCACCGGTGCCTTAATTGGAACCCACCGCAAGA
CTCATCTCTTCGATATCGACATCCCCGGCAAGATCACCTTCAAAGAGAGC
GAGGTCCTGTCCCCTGGTAACCAGTTGACTGTCGTCGATCTGCCGGACTA
TGGGAAAATCGGACTGGCTATCTGCTACGATATCCGCTTCCCGGAGGCCG
GCATGATTGCGGCTCGGAAGGGCGCCTTCATGCTCGTGTACCCGGGCGCA
TTCAACACCACCACGGGTCCGCTGCACTGGTCGCTGTTGGCTCGTGCTCG
CGCCGTTGATAACCAGGTGTATGTGGCCTTGTGCAGTCCCGCTCGAGACA
TGAGCGCCTCGTACCACGCCTATGGTCACAGTTTGGTTGCGGATCCGAGC
GCAAATGTGTTGGCTGAGACGGAGGAGAAGGAAGACATTATCTACGCGGA
TCTGGATAACGAGACGATCCAGAACACGAGGAAGGGTATTCCCATTTACA
CGCAGCGGCGGTTCGATTTGTACTCGGACATGGCCTCTCTCCTCAAGAAA
CCATTGAAACTGGCCCTGATCCAACTGGCCTCAGGGCACCACCGACGTCC
GTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGC
GTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGA
GGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGG
ATGTCAAGGGTCTTCACACCGCCGTTGTCGATGAGGAGTAAATGCACGGT
GTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTT
CGCCACCCGTGCTATGAAATGTCCGCCCCCGTCAAGACCGGCAAGAAGAC
TCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTACACCATCAACATGC
ACAAGAGATCGACGACCACTGCAGCCCACGACAGCCGACACTTCTGTCCC
TCATTCAGCGCCGACAAAACAGTAAACCTCGCACATGCTCGCTCCAAGGT
TCTCGAAGCCGCCAAAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTT
TCAACTCTCCCTACGGTACTCAATACTTCCCAAAGTACGCCGAGACACTG
CTTCCTTCCCCACCCACCCAAGAACAGTCCCCTTCCTACCATGCGCTTTC
GTCCATCGCCGCAGAAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGG
AACTTGAGCCGACCACGAAAAAGTACTACAACACCTCGCTGGTGTTCTCC
CCCACCGGTGCCTTAATTGGAACCCACCGCAAGACTCATCTCTTCGATAT
CGACATCCCCGGCAAGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTG
GTAACCAGTTGACTGTCGTCGATCTGCCGGACTATGGGAAAATCGGACTG
GCTATCTGCTACGATATCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCG
GAAGGGCGCCTTCATGCTCGTGTACCCGGGCGCATTCAACACCACCACGG
GTCCGCTGCACTGGTCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAG
GTGTATGTGGCCTTGTGCAGTCCCGCTCGAGACATGAGCGCCTCGTACCA
CGCCTATGGTCACAGTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTG
AGACGGAGGAGAAGGAAGACATTATCTACGCGGATCTGGATAACGAGACG
ATCCAGAACACGAGGAAGGGTATTCCCATTTACACGCAGCGGCGGTTCGA
TTTGTACTCGGACATGGCCTCTCTCCTCAAGAAACCATTGAAACTGGCCC
TGATCCAACTGGCCTCAGGGCACCACCGACGTCCGTGTCGACCCCCAGCT
CAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCCTACCGTCTCC
GTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGCCAAGGAGAAG
CTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCAAGGGTCTTCA
CACCGCCGTTGTCGATGAGGAGTAAATGCACGGTGTTTCCTTCAAGAAGC
GTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGCTATG
AAATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCGCC
GACGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGATCGACGAC
CACTGCAGCCCACGACAGCCGACACTTCTGTCCCTCATTCAGCGCCGACA
AAACAGTAAACCTCGCACATGCTCGCTCCAAGGTTCTCGAAGCCGCCAAA
GCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTTTCAACTCTCCCTACGG
TACTCAATACTTCCCAAAGTACGCCGAGACACTGCTTCCTTCCCCACCCA
CCCAAGAACAGTCCCCTTCCTACCATGCGCTTTCGTCCATCGCCGCAGAA
GCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGGAACTTGAGCCGACCAC
GAAAAAGTACTACAACACCTCGCTGGTGTTCTCCCCCACCGGTGCCTTAA
TTGGAACCCACCGCAAGACTCATCTCTTCGATATCGACATCCCCGGCAAG
ATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTGGTAACCAGTTGACTGT
CGTCGATCTGCCGGACTATGGGAAAATCGGACTGGCTATCTGCTACGATA
TCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCGGAAGGGCGCCTTCATG
CTCGTGTACCCGGGCGCATTCAACACCACCACGGGTCCGCTGCACTGGTC
GCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAGGTGTATGTGGCCTTGT
GCAGTCCCGCTCGAGACATGAGCGCCTCGTACCACGCCTATGGTCACAGT
TTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTGAGACGGAGGAGAAGGA
AGACATTATCTACGCGGATCTGGATAACGAGACGATCCAGAACACGAGGA
AGGGTATTCCCATTTACACGCAGCGGCGGTTCGATTTGTACTCGGACATG
GCCTCTCTCCTCAAGAAACCATTGAAACTGGCCCTGATCCAACTGGCCTC
AGGGCACCACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGG
GAAGCCGGTGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCG
CAAGCGTAACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCC
AGGCTGTCAACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGAT
GAGGAGTAAATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTAT
CAAGGAGATCCGCGCTTTCGCCACCCGTGCTATGAAATGTCCGCCCCCGT
CAAGACCGGCAAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCG
AGTACACCATCAACATGCACAAGAGATCGACGACCACTGCAGCCCACGAC
AGCCGACACTTCTGTCCCTCATTCAGCGCCGACAAAACAGTAAACCTCGC
ACATGCTCGCTCCAAGGTTCTCGAAGCCGCCAAAGCTGGTGCCTCTCTTA
TCGTCCTTCCGGAATGTTTCAACTCTCCCTACGGTACTCAATACTTCCCA
AAGTACGCCGAGACACTGCTTCCTTCCCCACCCACCCAAGAACAGTCCCC
TTCCTACCATGCGCTTTCGTCCATCGCCGCAGAAGCCAAGGCCTACTTGG
TGGGTGGTAGCATTCCGGAACTTGAGCCGACCACGAAAAAGTACTACAAC
ACCTCGCTGGTGTTCTCCCCCACCGGTGCCTTAATTGGAACCCACCGCAA
GACTCATCTCTTCGATATCGACATCCCCGGCAAGATCACCTTCAAAGAGA
GCGAGGTCCTGTCCCCTGGTAACCAGTTGACTGTCGTCGATCTGCCGGAC
TATGGGAAAATCGGACTGGCTATCTGCTACGATATCCGCTTCCCGGAGGC
CGGCATGATTGCGGCTCGGAAGGGCGCCTTCATGCTCGTGTACCCGGGCG
CATTCAACACCACCACGGGTCCGCTGCACTGGTCGCTGTTGGCTCGTGCT
CGCGCCGTTGATAACCAGGTGTATGTGGCCTTGTGCAGTCCCGCTCGAGA
CATGAGCGCCTCGTACCACGCCTATGGTCACAGTTTGGTTGCGGATCCGA
GCGCAAATGTGTTGGCTGAGACGGAGGAGAAGGAAGACATTATCTACGCG
GATCTGGATAACGAGACGATCCAGAACACGAGGAAGGGTATTCCCATTTA
CACGCAGCGGCGGTTCGATTTGTACTCGGACATGGCCTCTCTCCTCAAGA
AACCATTGAAACTGGCCCTGATCCAACTGGCCTCAGGGCACCACCGACGT
CCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGG
GCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAG
GAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAA
GGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGAGGAGTAAATGCACG
GTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCT
TTCGCCACCCGTGCTATGAAATGTCCGCCCCCGTCAAGACCGGCAAGAAG
ACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTACACCATCAACAT
GCACAAGAGATCGACGACCACTGCAGCCCACGACAGCCGACACTTCTGTC
CCTCATTCAGCGCCGACAAAACAGTAAACCTCGCACATGCTCGCTCCAAG
GTTCTCGAAGCCGCCAAAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATG
TTTCAACTCTCCCTACGGTACTCAATACTTCCCAAAGTACGCCGAGACAC
TGCTTCCTTCCCCACCCACCCAAGAACAGTCCCCTTCCTACCATGCGCTT
TCGTCCATCGCCGCAGAAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCC
GGAACTTGAGCCGACCACGAAAAAGTACTACAACACCTCGCTGGTGTTCT
CCCCCACCGGTGCCTTAATTGGAACCCACCGCAAGACTCATCTCTTCGAT
ATCGACATCCCCGGCAAGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCC
TGGTAACCAGTTGACTGTCGTCGATCTGCCGGACTATGGGAAAATCGGAC
TGGCTATCTGCTACGATATCCGCTTCCCGGAGGCCGGCATGATTGCGGCT
CGGAAGGGCGCCTTCATGCTCGTGTACCCGGGCGCATTCAACACCACCAC
GGGTCCGCTGCACTGGTCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACC
AGGTGTATGTGGCCTTGTGCAGTCCCGCTCGAGACATGAGCGCCTCGTAC
CACGCCTATGGTCACAGTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGC
TGAGACGGAGGAGAAGGAAGACATTATCTACGCGGATCTGGATAACGAGA
CGATCCAGAACACGAGGAAGGGTATTCCCATTTACACGCAGCGGCGGTTC
GATTTGTACTCGGACATGGCCTCTCTCCTCAAGAAACCATTGAAACTGGC
CCTGATCCAACTGGCCTCAGGGCACCACCGACGTCCGTGTCGACCCCCAG
CTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCCTACCGTCT
CCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGCCAAGGAGA
AGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCAAGGGTCTT
CACACCGCCGTTGTCGATGAGGAGTAAATGCACGGTGTTTCCTTCAAGAA
GCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGCTA
TGAAATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCG
CCGACGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGATCGACG
ACCACTGCAGCCCACGACAGCCGACACTTCTGTCCCTCATTCAGCGCCGA
CAAAACAGTAAACCTCGCACATGCTCGCTCCAAGGTTCTCGAAGCCGCCA
AAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTTTCAACTCTCCCTAC
GGTACTCAATACTTCCCAAAGTACGCCGAGACACTGCTTCCTTCCCCACC
CACCCAAGAACAGTCCCCTTCCTACCATGCGCTTTCGTCCATCGCCGCAG
AAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGGAACTTGAGCCGACC
ACGAAAAAGTACTACAACACCTCGCTGGTGTTCTCCCCCACCGGTGCCTT
AATTGGAACCCACCGCAAGACTCATCTCTTCGATATCGACATCCCCGGCA
AGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTGGTAACCAGTTGACT
GTCGTCGATCTGCCGGACTATGGGAAAATCGGACTGGCTATCTGCTACGA
TATCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCGGAAGGGCGCCTTCA
TGCTCGTGTACCCGGGCGCATTCAACACCACCACGGGTCCGCTGCACTGG
TCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAGGTGTATGTGGCCTT
GTGCAGTCCCGCTCGAGACATGAGCGCCTCGTACCACGCCTATGGTCACA
GTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTGAGACGGAGGAGAAG
GAAGACATTATCTACGCGGATCTGGATAACGAGACGATCCAGAACACGAG
GAAGGGTATTCCCATTTACACGCAGCGGCGGTTCGATTTGTACTCGGACA
TGGCCTCTCTCCTCAAGAAACCATTGAAACTGGCCCTGATCCAACTGGCC
TCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR003010 |
| InterPro | IPR001110 |
| PFAM | PF00795 |
| PFAM | PF01198 |
| InterPro | IPR036526 |
| InterPro | IPR023621 |
| InterPro | IPR000054 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265EOF |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000246 | supercontig | MCQH01000246:15847..18176 - |
|
