You are here

Home

ATCC10864_010763-T1, ATCC10864_010763-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010763-T1
Unique NameATCC10864_010763-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:60550..61457+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010763-T1 ID=ATCC10864_010763-T1|Name=ATCC10864_010763-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=908bp|location=Sequence derived from alignment at MCQH01000246:60550..61457+ (Aspergillus niger ATCC 10864)
ATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACAC
AATAGCGGCCTTTAGTGAGTCCCCCAGCTCCAGAACTTCCCACCCGCGCC
GGCGCGGGAGGCAAATCCATCCCACCACATTCATTACACATACAAACAAC
ATCCATGTAACTAACAAGCACACCAATGCACCAGAGAACGGCGAATTCAT
CATCGTGCTCGATTCCCAAGACCGCGAAAATGAAGGCGATCTCATCATTG
CCGCTGACTCCATCACTCCGGCGCAGATGGCTTTCCTTGTTCGCCACACA
AGGTAAATCCCCCATTTCCCCCACCTCCTTTCCCCACGAGCACATCAAAT
GTTACTTAACGGGATCACCAATGCTAATGATGGATGAATAGTGGCCTGAT
ATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAA
TGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTC
GACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGC
TCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGC
GCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGG
GAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGG
CAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCG
TACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGAT
GGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGA
GGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATG
GGAACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:60550..61457+

>ATCC10864_010763-T1 ID=ATCC10864_010763-T1|Name=ATCC10864_010763-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2097bp|location=Sequence derived from alignment at MCQH01000246:60550..61457+ (Aspergillus niger ATCC 10864)
ATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACAC
AATAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAG
ACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCG
GCGCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCC
CGTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCG
AGAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCT
GACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTG
TAGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCG
GTCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACG
GGACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCA
GGCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAG
TTCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTG
AGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGT
GGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGAA
TGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACACA
ATAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAGA
CCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCGG
CGCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCCC
GTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCGA
GAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCTG
ACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTGT
AGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCGG
TCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACGG
GACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCAG
GCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAGT
TCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTGA
GGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGTG
GAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGAAT
GCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACACAA
TAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAGAC
CGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCGGC
GCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCCCG
TCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCGAG
AACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCTGA
CCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTGTA
GGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCGGT
CATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACGGG
ACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCAGG
CGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAGTT
CCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTGAG
GTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGTGG
AGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00086863,4-dihydroxy-2-butanone-4-phosphate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RIB3ATCC10864_010763Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010763-T1.exon1ATCC10864_010763-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010763-T1.exon2ATCC10864_010763-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010763-T1.exon3ATCC10864_010763-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010763-T1.cdsATCC10864_010763-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010763-T1ATCC10864_010763-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR017945
InterProIPR000422
PFAMPF00926
Properties
Property NameValue
NoteBUSCO:EOG09263Z8I
Product4-dihydroxy 2-butanone 4-phosphate synthase
Product3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:60550..61457 +
Powered by Drupal