You are here

Home

ATCC10864_010810-T1, ATCC10864_010810-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010810-T1
Unique NameATCC10864_010810-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:204675..205853-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010810-T1 ID=ATCC10864_010810-T1|Name=ATCC10864_010810-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1179bp|location=Sequence derived from alignment at MCQH01000246:204675..205853- (Aspergillus niger ATCC 10864)
ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAG
TCTTCTCACCCTCTCCTTGCTGTATAATATCGCCCGATGGCGGCAACTTG
ACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG
CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGAC
ACTTGTGGAGCAAAACATCTTCACCGTGCTTTTGAACGCGGCCACTCTCT
TTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG
AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCT
TTATATTCTAGGAGCTGCCCTTAAAAGTGGCTCCAGCAGCGGGTACGCCT
TGTTTTCTCATGACGAATGCACAACATCTTGCGCTTTCCTTACTGACTCA
CCGACTTCAAGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATC
CTTCTTGGTCGCCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCT
TCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTG
TTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGAT
TCTTGCGTGGCTCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCA
AACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAG
GGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCT
TCAGCCGCCAATCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTG
CCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAAC
CAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAA
CCATCGCAACGGACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGAC
GTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCG
GGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCA
TGCTCAGACTCCGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAG
AAACAAGCTACACCCCCGACCATGCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:204675..205853-

>ATCC10864_010810-T1 ID=ATCC10864_010810-T1|Name=ATCC10864_010810-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2220bp|location=Sequence derived from alignment at MCQH01000246:204675..205853- (Aspergillus niger ATCC 10864)
CCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCG
CCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTG
GTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTGTTCCTGAACAC
CATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGC
TCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCT
GACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAGGGTGATGCCAG
CGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAA
TCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATC
TGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAACCAGCAGGTTCT
GGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACG
GACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCA
CTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCGGGAAGAGTGCA
GCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTC
CGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTAC
ACCCCCGACCATGCGTGAATGGCGCCTCGAGTCAATATCCCTCCAGCGAC
CCGCATCTGTCTTATCAGTCTTCTCACCCTCTCCTTGCTGTATAATATCG
CCCGATGGCGGCAACTTGACACCACGCCCGGCGCACCTGCCATCACCCCG
ATCATACCCTATTTGACGCTCGTTCCTTCACAATTTCTTTTCTATCCGTG
GACCCTCCTTACCGCGACACTTGTGGAGCAAAACATCTTCACCGTGCTTT
TGAACGCGGCCACTCTCTTTTATGGCGGGAAATACTTGGAGCGCGCATGG
GGATCCCGGGAGTTTGCGAAGTTCATCCTCGCCATCGCAGTCATCCCGAA
CGTAACGATCGTTCCGCTTTATATTCTAGGAGCTGCCCTTAAAAGTGGCT
CCAGCAGCGGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCC
TTCTTGGTCGCCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCTT
CAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTGT
TCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATT
CTTGCGTGGCTCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCAA
ACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAGG
GTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTT
CAGCCGCCAATCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTGC
CATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAACC
AGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAAC
CATCGCAACGGACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGACG
TGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCGG
GAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCAT
GCTCAGACTCCGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAGA
AACAAGCTACACCCCCGACCATGCGTGAATGGCGCCTCGAGTCAATATCC
CTCCAGCGACCCGCATCTGTCTTATCAGTCTTCTCACCCTCTCCTTGCTG
TATAATATCGCCCGATGGCGGCAACTTGACACCACGCCCGGCGCACCTGC
CATCACCCCGATCATACCCTATTTGACGCTCGTTCCTTCACAATTTCTTT
TCTATCCGTGGACCCTCCTTACCGCGACACTTGTGGAGCAAAACATCTTC
ACCGTGCTTTTGAACGCGGCCACTCTCTTTTATGGCGGGAAATACTTGGA
GCGCGCATGGGGATCCCGGGAGTTTGCGAAGTTCATCCTCGCCATCGCAG
TCATCCCGAACGTAACGATCGTTCCGCTTTATATTCTAGGAGCTGCCCTT
AAAAGTGGCTCCAGCAGCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010810ATCC10864_010810Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010810-T1ATCC10864_010810-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010810-T1.cdsATCC10864_010810-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010810-T1.exon2ATCC10864_010810-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010810-T1.exon1ATCC10864_010810-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013861
InterProIPR035952
PFAMPF01694
PFAMPF08551
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:204675..205853 -
Powered by Drupal