You are here

Home

ATCC10864_010816-T1, ATCC10864_010816-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010816-T1
Unique NameATCC10864_010816-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:224721..226326-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010816-T1 ID=ATCC10864_010816-T1|Name=ATCC10864_010816-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1606bp|location=Sequence derived from alignment at MCQH01000246:224721..226326- (Aspergillus niger ATCC 10864)
ATGGCGTCTCCCGAGCAGATTCCCGGGCAGGAATACGAGTATGTCGACCG
TGTTATTTTCCCCTTCGTATCCGTGGCGCCTTCGCTTGTTCGCGCAAGGC
TTTCTGCAGGGCCTATCTCATCAGCAGATACTTCCTGCGATTGACTGGCG
CTGCATGATTTATTGCATTTTCCGAAGCGATATTGGGGAACGATTTGCTC
TCCGTATAGGAATTCGCAGCTAACGTTCCAATTTGATATTAGCTATGAAG
CCCTCCCTTCGAACTACGGCCTAGGCCGGAACATGCTGGCTGGCGCCTTT
GCAGGAATAGCAGTATGTGGAAAGACCGTGGGATTTGGTGACTGGGTTCC
GGTGGTTGTGCTAATGGGTGCTTGGTTGTTCTAGGAACACTCTGTTATGT
ATCCGGTAGACTTGTTGAAGGTATGTTGATTGCTGTTGGGGAGGTTTGAG
ATGGGTTGGAGGTGCTGGAGATTGATTGCTTCATCTCTTATGTTGGACTT
CGCGGGTGCGGTGGGCTAATGGTGGGGTTTGTACAGACACGCATGCAAAT
CCTGCATCCCTCGAACGGCGGGCTCTACACAGGCTTGACCAATGCGGTTT
CGACCATCTACCGAATTGAAGGCTGGAGGACGCTATGGAAGGGCGTTTCG
AGTGTTATCGTTGGTGCTGGTGAGTGCGACAATTTTGGGCGCGCCGTTGC
GGGTGCTATCGCGGCGGAGGTTGATCTGGTGAATTTCTAGGTCCGGCTCA
TGCCGTTTACTTTGGTACATACGAGGTCGTTAAGGAAATGGCCGGTGGAA
ATGTGGACGATGGGCACCATCCGGTAGCAGCTGGTAGGTTTTGGTGCTTT
GCTTGGAGATGCGATGATTTTGGTGCAATTGCTGACGATGCCAAGCGCTG
AGCGGTGCGTCCGCAACCATTGCTAGCGACGCCTTGATGAACCCCTTCGA
TGGTGAGTACTGCGCCCTTTGCGCTCCATCCATTTCAATTTGTTTCCGGA
GTATCGGCTAACTGAAGTAGTCATCAAGCAGCGCATGCAGGTCCATGGCT
CGGTACATAAGAGTATCCTTCAGTGCGCTCGCTCCGTCTACAAGACGGAA
GGTCTCCAGGCGTTCTACGTATCCTATCCCACTACGCTTTGCATGACGGT
GCCTTTCACCGCCACTCAGTTTGTCGCCTACGAGTCCATCTCCAAGGTCA
TGAACCCGTCGCAGGATTACGACCCGTTCACGCACTGCATGGCGGGAGGT
CTGGCGGGTGCATTCGCCGCCGGTATCACCACCCCGCTTGACGTTGTGAA
GACGCTGCTGCAGACCCGAGGGCTGGCCCAGAACGAGGAGATCCGGTCGG
CCAAGGGTCTCTTCAACGCTGCGGCCATTATCAAGCGGCAGTTTGGCTGG
AAGGGATTCCTGCGTGGCGCTCGCCCCCGTATTATTTCCACCATGCCCAG
CACTGCTATTTGCTGGTGAGTTTCCTTGCAACTTTTGACGGACCCATTGC
AAAATTACCGCCGATGTCTGCGCATTGAAAACAGTTGCTGACGCGATCCT
ACAGGACCTCGTATGAGATGGCCAAGGCCTACTTCAAGGGCCAGGTGGAC
AGCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000246:224721..226326-

>ATCC10864_010816-T1 ID=ATCC10864_010816-T1|Name=ATCC10864_010816-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7392bp|location=Sequence derived from alignment at MCQH01000246:224721..226326- (Aspergillus niger ATCC 10864)
GACCTCGTATGAGATGGCCAAGGCCTACTTCAAGGGCCAGGTGGACAGCT
AGTCATCAAGCAGCGCATGCAGGTCCATGGCTCGGTACATAAGAGTATCC
TTCAGTGCGCTCGCTCCGTCTACAAGACGGAAGGTCTCCAGGCGTTCTAC
GTATCCTATCCCACTACGCTTTGCATGACGGTGCCTTTCACCGCCACTCA
GTTTGTCGCCTACGAGTCCATCTCCAAGGTCATGAACCCGTCGCAGGATT
ACGACCCGTTCACGCACTGCATGGCGGGAGGTCTGGCGGGTGCATTCGCC
GCCGGTATCACCACCCCGCTTGACGTTGTGAAGACGCTGCTGCAGACCCG
AGGGCTGGCCCAGAACGAGGAGATCCGGTCGGCCAAGGGTCTCTTCAACG
CTGCGGCCATTATCAAGCGGCAGTTTGGCTGGAAGGGATTCCTGCGTGGC
GCTCGCCCCCGTATTATTTCCACCATGCCCAGCACTGCTATTTGCTGCGC
TGAGCGGTGCGTCCGCAACCATTGCTAGCGACGCCTTGATGAACCCCTTC
GATGGTCCGGCTCATGCCGTTTACTTTGGTACATACGAGGTCGTTAAGGA
AATGGCCGGTGGAAATGTGGACGATGGGCACCATCCGGTAGCAGCTGACA
CGCATGCAAATCCTGCATCCCTCGAACGGCGGGCTCTACACAGGCTTGAC
CAATGCGGTTTCGACCATCTACCGAATTGAAGGCTGGAGGACGCTATGGA
AGGGCGTTTCGAGTGTTATCGTTGGTGCTGGAACACTCTGTTATGTATCC
GGTAGACTTGTTGAAGCTATGAAGCCCTCCCTTCGAACTACGGCCTAGGC
CGGAACATGCTGGCTGGCGCCTTTGCAGGAATAGCAATGGCGTCTCCCGA
GCAGATTCCCGGGCAGGAATACGAGACCTCGTATGAGATGGCCAAGGCCT
ACTTCAAGGGCCAGGTGGACAGCTAGTCATCAAGCAGCGCATGCAGGTCC
ATGGCTCGGTACATAAGAGTATCCTTCAGTGCGCTCGCTCCGTCTACAAG
ACGGAAGGTCTCCAGGCGTTCTACGTATCCTATCCCACTACGCTTTGCAT
GACGGTGCCTTTCACCGCCACTCAGTTTGTCGCCTACGAGTCCATCTCCA
AGGTCATGAACCCGTCGCAGGATTACGACCCGTTCACGCACTGCATGGCG
GGAGGTCTGGCGGGTGCATTCGCCGCCGGTATCACCACCCCGCTTGACGT
TGTGAAGACGCTGCTGCAGACCCGAGGGCTGGCCCAGAACGAGGAGATCC
GGTCGGCCAAGGGTCTCTTCAACGCTGCGGCCATTATCAAGCGGCAGTTT
GGCTGGAAGGGATTCCTGCGTGGCGCTCGCCCCCGTATTATTTCCACCAT
GCCCAGCACTGCTATTTGCTGCGCTGAGCGGTGCGTCCGCAACCATTGCT
AGCGACGCCTTGATGAACCCCTTCGATGGTCCGGCTCATGCCGTTTACTT
TGGTACATACGAGGTCGTTAAGGAAATGGCCGGTGGAAATGTGGACGATG
GGCACCATCCGGTAGCAGCTGACACGCATGCAAATCCTGCATCCCTCGAA
CGGCGGGCTCTACACAGGCTTGACCAATGCGGTTTCGACCATCTACCGAA
TTGAAGGCTGGAGGACGCTATGGAAGGGCGTTTCGAGTGTTATCGTTGGT
GCTGGAACACTCTGTTATGTATCCGGTAGACTTGTTGAAGCTATGAAGCC
CTCCCTTCGAACTACGGCCTAGGCCGGAACATGCTGGCTGGCGCCTTTGC
AGGAATAGCAATGGCGTCTCCCGAGCAGATTCCCGGGCAGGAATACGAGA
CCTCGTATGAGATGGCCAAGGCCTACTTCAAGGGCCAGGTGGACAGCTAG
TCATCAAGCAGCGCATGCAGGTCCATGGCTCGGTACATAAGAGTATCCTT
CAGTGCGCTCGCTCCGTCTACAAGACGGAAGGTCTCCAGGCGTTCTACGT
ATCCTATCCCACTACGCTTTGCATGACGGTGCCTTTCACCGCCACTCAGT
TTGTCGCCTACGAGTCCATCTCCAAGGTCATGAACCCGTCGCAGGATTAC
GACCCGTTCACGCACTGCATGGCGGGAGGTCTGGCGGGTGCATTCGCCGC
CGGTATCACCACCCCGCTTGACGTTGTGAAGACGCTGCTGCAGACCCGAG
GGCTGGCCCAGAACGAGGAGATCCGGTCGGCCAAGGGTCTCTTCAACGCT
GCGGCCATTATCAAGCGGCAGTTTGGCTGGAAGGGATTCCTGCGTGGCGC
TCGCCCCCGTATTATTTCCACCATGCCCAGCACTGCTATTTGCTGCGCTG
AGCGGTGCGTCCGCAACCATTGCTAGCGACGCCTTGATGAACCCCTTCGA
TGGTCCGGCTCATGCCGTTTACTTTGGTACATACGAGGTCGTTAAGGAAA
TGGCCGGTGGAAATGTGGACGATGGGCACCATCCGGTAGCAGCTGACACG
CATGCAAATCCTGCATCCCTCGAACGGCGGGCTCTACACAGGCTTGACCA
ATGCGGTTTCGACCATCTACCGAATTGAAGGCTGGAGGACGCTATGGAAG
GGCGTTTCGAGTGTTATCGTTGGTGCTGGAACACTCTGTTATGTATCCGG
TAGACTTGTTGAAGCTATGAAGCCCTCCCTTCGAACTACGGCCTAGGCCG
GAACATGCTGGCTGGCGCCTTTGCAGGAATAGCAATGGCGTCTCCCGAGC
AGATTCCCGGGCAGGAATACGAGACCTCGTATGAGATGGCCAAGGCCTAC
TTCAAGGGCCAGGTGGACAGCTAGTCATCAAGCAGCGCATGCAGGTCCAT
GGCTCGGTACATAAGAGTATCCTTCAGTGCGCTCGCTCCGTCTACAAGAC
GGAAGGTCTCCAGGCGTTCTACGTATCCTATCCCACTACGCTTTGCATGA
CGGTGCCTTTCACCGCCACTCAGTTTGTCGCCTACGAGTCCATCTCCAAG
GTCATGAACCCGTCGCAGGATTACGACCCGTTCACGCACTGCATGGCGGG
AGGTCTGGCGGGTGCATTCGCCGCCGGTATCACCACCCCGCTTGACGTTG
TGAAGACGCTGCTGCAGACCCGAGGGCTGGCCCAGAACGAGGAGATCCGG
TCGGCCAAGGGTCTCTTCAACGCTGCGGCCATTATCAAGCGGCAGTTTGG
CTGGAAGGGATTCCTGCGTGGCGCTCGCCCCCGTATTATTTCCACCATGC
CCAGCACTGCTATTTGCTGCGCTGAGCGGTGCGTCCGCAACCATTGCTAG
CGACGCCTTGATGAACCCCTTCGATGGTCCGGCTCATGCCGTTTACTTTG
GTACATACGAGGTCGTTAAGGAAATGGCCGGTGGAAATGTGGACGATGGG
CACCATCCGGTAGCAGCTGACACGCATGCAAATCCTGCATCCCTCGAACG
GCGGGCTCTACACAGGCTTGACCAATGCGGTTTCGACCATCTACCGAATT
GAAGGCTGGAGGACGCTATGGAAGGGCGTTTCGAGTGTTATCGTTGGTGC
TGGAACACTCTGTTATGTATCCGGTAGACTTGTTGAAGCTATGAAGCCCT
CCCTTCGAACTACGGCCTAGGCCGGAACATGCTGGCTGGCGCCTTTGCAG
GAATAGCAATGGCGTCTCCCGAGCAGATTCCCGGGCAGGAATACGAGACC
TCGTATGAGATGGCCAAGGCCTACTTCAAGGGCCAGGTGGACAGCTAGTC
ATCAAGCAGCGCATGCAGGTCCATGGCTCGGTACATAAGAGTATCCTTCA
GTGCGCTCGCTCCGTCTACAAGACGGAAGGTCTCCAGGCGTTCTACGTAT
CCTATCCCACTACGCTTTGCATGACGGTGCCTTTCACCGCCACTCAGTTT
GTCGCCTACGAGTCCATCTCCAAGGTCATGAACCCGTCGCAGGATTACGA
CCCGTTCACGCACTGCATGGCGGGAGGTCTGGCGGGTGCATTCGCCGCCG
GTATCACCACCCCGCTTGACGTTGTGAAGACGCTGCTGCAGACCCGAGGG
CTGGCCCAGAACGAGGAGATCCGGTCGGCCAAGGGTCTCTTCAACGCTGC
GGCCATTATCAAGCGGCAGTTTGGCTGGAAGGGATTCCTGCGTGGCGCTC
GCCCCCGTATTATTTCCACCATGCCCAGCACTGCTATTTGCTGCGCTGAG
CGGTGCGTCCGCAACCATTGCTAGCGACGCCTTGATGAACCCCTTCGATG
GTCCGGCTCATGCCGTTTACTTTGGTACATACGAGGTCGTTAAGGAAATG
GCCGGTGGAAATGTGGACGATGGGCACCATCCGGTAGCAGCTGACACGCA
TGCAAATCCTGCATCCCTCGAACGGCGGGCTCTACACAGGCTTGACCAAT
GCGGTTTCGACCATCTACCGAATTGAAGGCTGGAGGACGCTATGGAAGGG
CGTTTCGAGTGTTATCGTTGGTGCTGGAACACTCTGTTATGTATCCGGTA
GACTTGTTGAAGCTATGAAGCCCTCCCTTCGAACTACGGCCTAGGCCGGA
ACATGCTGGCTGGCGCCTTTGCAGGAATAGCAATGGCGTCTCCCGAGCAG
ATTCCCGGGCAGGAATACGAGACCTCGTATGAGATGGCCAAGGCCTACTT
CAAGGGCCAGGTGGACAGCTAGTCATCAAGCAGCGCATGCAGGTCCATGG
CTCGGTACATAAGAGTATCCTTCAGTGCGCTCGCTCCGTCTACAAGACGG
AAGGTCTCCAGGCGTTCTACGTATCCTATCCCACTACGCTTTGCATGACG
GTGCCTTTCACCGCCACTCAGTTTGTCGCCTACGAGTCCATCTCCAAGGT
CATGAACCCGTCGCAGGATTACGACCCGTTCACGCACTGCATGGCGGGAG
GTCTGGCGGGTGCATTCGCCGCCGGTATCACCACCCCGCTTGACGTTGTG
AAGACGCTGCTGCAGACCCGAGGGCTGGCCCAGAACGAGGAGATCCGGTC
GGCCAAGGGTCTCTTCAACGCTGCGGCCATTATCAAGCGGCAGTTTGGCT
GGAAGGGATTCCTGCGTGGCGCTCGCCCCCGTATTATTTCCACCATGCCC
AGCACTGCTATTTGCTGCGCTGAGCGGTGCGTCCGCAACCATTGCTAGCG
ACGCCTTGATGAACCCCTTCGATGGTCCGGCTCATGCCGTTTACTTTGGT
ACATACGAGGTCGTTAAGGAAATGGCCGGTGGAAATGTGGACGATGGGCA
CCATCCGGTAGCAGCTGACACGCATGCAAATCCTGCATCCCTCGAACGGC
GGGCTCTACACAGGCTTGACCAATGCGGTTTCGACCATCTACCGAATTGA
AGGCTGGAGGACGCTATGGAAGGGCGTTTCGAGTGTTATCGTTGGTGCTG
GAACACTCTGTTATGTATCCGGTAGACTTGTTGAAGCTATGAAGCCCTCC
CTTCGAACTACGGCCTAGGCCGGAACATGCTGGCTGGCGCCTTTGCAGGA
ATAGCAATGGCGTCTCCCGAGCAGATTCCCGGGCAGGAATACGAGACCTC
GTATGAGATGGCCAAGGCCTACTTCAAGGGCCAGGTGGACAGCTAGTCAT
CAAGCAGCGCATGCAGGTCCATGGCTCGGTACATAAGAGTATCCTTCAGT
GCGCTCGCTCCGTCTACAAGACGGAAGGTCTCCAGGCGTTCTACGTATCC
TATCCCACTACGCTTTGCATGACGGTGCCTTTCACCGCCACTCAGTTTGT
CGCCTACGAGTCCATCTCCAAGGTCATGAACCCGTCGCAGGATTACGACC
CGTTCACGCACTGCATGGCGGGAGGTCTGGCGGGTGCATTCGCCGCCGGT
ATCACCACCCCGCTTGACGTTGTGAAGACGCTGCTGCAGACCCGAGGGCT
GGCCCAGAACGAGGAGATCCGGTCGGCCAAGGGTCTCTTCAACGCTGCGG
CCATTATCAAGCGGCAGTTTGGCTGGAAGGGATTCCTGCGTGGCGCTCGC
CCCCGTATTATTTCCACCATGCCCAGCACTGCTATTTGCTGCGCTGAGCG
GTGCGTCCGCAACCATTGCTAGCGACGCCTTGATGAACCCCTTCGATGGT
CCGGCTCATGCCGTTTACTTTGGTACATACGAGGTCGTTAAGGAAATGGC
CGGTGGAAATGTGGACGATGGGCACCATCCGGTAGCAGCTGACACGCATG
CAAATCCTGCATCCCTCGAACGGCGGGCTCTACACAGGCTTGACCAATGC
GGTTTCGACCATCTACCGAATTGAAGGCTGGAGGACGCTATGGAAGGGCG
TTTCGAGTGTTATCGTTGGTGCTGGAACACTCTGTTATGTATCCGGTAGA
CTTGTTGAAGCTATGAAGCCCTCCCTTCGAACTACGGCCTAGGCCGGAAC
ATGCTGGCTGGCGCCTTTGCAGGAATAGCAATGGCGTCTCCCGAGCAGAT
TCCCGGGCAGGAATACGAGACCTCGTATGAGATGGCCAAGGCCTACTTCA
AGGGCCAGGTGGACAGCTAGTCATCAAGCAGCGCATGCAGGTCCATGGCT
CGGTACATAAGAGTATCCTTCAGTGCGCTCGCTCCGTCTACAAGACGGAA
GGTCTCCAGGCGTTCTACGTATCCTATCCCACTACGCTTTGCATGACGGT
GCCTTTCACCGCCACTCAGTTTGTCGCCTACGAGTCCATCTCCAAGGTCA
TGAACCCGTCGCAGGATTACGACCCGTTCACGCACTGCATGGCGGGAGGT
CTGGCGGGTGCATTCGCCGCCGGTATCACCACCCCGCTTGACGTTGTGAA
GACGCTGCTGCAGACCCGAGGGCTGGCCCAGAACGAGGAGATCCGGTCGG
CCAAGGGTCTCTTCAACGCTGCGGCCATTATCAAGCGGCAGTTTGGCTGG
AAGGGATTCCTGCGTGGCGCTCGCCCCCGTATTATTTCCACCATGCCCAG
CACTGCTATTTGCTGCGCTGAGCGGTGCGTCCGCAACCATTGCTAGCGAC
GCCTTGATGAACCCCTTCGATGGTCCGGCTCATGCCGTTTACTTTGGTAC
ATACGAGGTCGTTAAGGAAATGGCCGGTGGAAATGTGGACGATGGGCACC
ATCCGGTAGCAGCTGACACGCATGCAAATCCTGCATCCCTCGAACGGCGG
GCTCTACACAGGCTTGACCAATGCGGTTTCGACCATCTACCGAATTGAAG
GCTGGAGGACGCTATGGAAGGGCGTTTCGAGTGTTATCGTTGGTGCTGGA
ACACTCTGTTATGTATCCGGTAGACTTGTTGAAGCTATGAAGCCCTCCCT
TCGAACTACGGCCTAGGCCGGAACATGCTGGCTGGCGCCTTTGCAGGAAT
AGCAATGGCGTCTCCCGAGCAGATTCCCGGGCAGGAATACGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010816ATCC10864_010816Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010816-T1ATCC10864_010816-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010816-T1.cdsATCC10864_010816-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010816-T1.exon8ATCC10864_010816-T1.exon8Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon7ATCC10864_010816-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon6ATCC10864_010816-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon5ATCC10864_010816-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon4ATCC10864_010816-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon3ATCC10864_010816-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon2ATCC10864_010816-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010816-T1.exon1ATCC10864_010816-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018108
InterProIPR023395
PFAMPF00153
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:224721..226326 -
Powered by Drupal