You are here

Home

ATCC10864_010820-T1, ATCC10864_010820-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010820-T1
Unique NameATCC10864_010820-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:243663..244907+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010820-T1 ID=ATCC10864_010820-T1|Name=ATCC10864_010820-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1245bp|location=Sequence derived from alignment at MCQH01000246:243663..244907+ (Aspergillus niger ATCC 10864)
ATGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAG
CTCCATGAGGAAGCTGTATGCTTTCCGTCACCTATATTGGTCAATCAAGC
TTACATATGGCTAATTTCTTCAATGCAACAGCTACCCCGAGTCATTGGCA
GATAAGAGCTGGGACAACACCGGCCGTAAGCTCTCATCCGTCCTCCGCCA
ATCTTCCATCCCATTAACTTTATATCCCAGTCCTCCTCGAAGCGCCCTTC
GACCACACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCAC
CAAAGCAGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAG
CCTACCGTACGCAATGCCCCCTACACCTGCACACCCCATCACCTACTCAC
ACAGTTCCTCCGCAGACCCGATCATCTTCCGTGGCCTCAAATCCATCACC
TTCAACGATCCTCAACAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCAT
CAGCGTCTACTCCCCGCACACAGCCATCGACGCAACCCCCGGCGGCATGG
CCGACTGGCTCTGCGACATCGTCACCGGCGCCATCGCCCCAACAAGCACC
ACCAAGCCCACTATCCAGAAATCCTCCTCAACACACTACTCCCACGCCAC
CTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCC
GAACCACAATCATCCCCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCA
GCGGGAATGGGGCGCATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGC
CGTCGTGGACCGCATTGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCA
TCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTC
GGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGG
GAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGT
TGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAAT
ACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGC
GGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTG
CGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGT
GAGAAGGATCGTGATCCGTATGGTATTATGATTCGACAGGTCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000246:243663..244907+

>ATCC10864_010820-T1 ID=ATCC10864_010820-T1|Name=ATCC10864_010820-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4260bp|location=Sequence derived from alignment at MCQH01000246:243663..244907+ (Aspergillus niger ATCC 10864)
ATGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAG
CTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACA
ACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAA
AACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGC
AATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCC
GTGGCCTCAAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTC
CGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGA
CGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCG
CCATCGCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCA
ACACACTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGC
GACTCCCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAG
TGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGAC
GAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGG
ATATCCCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGG
ACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATC
CTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGA
GTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGG
TTGCGCTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATG
CGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGA
GGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGG
AGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATG
ATTCGACAGGTCTAGATGTCTGCTTCATACCCCACTTCATCGCCATTCAC
GCAGGCAGTGGTGAGCTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAG
ATAAGAGCTGGGACAACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCAC
ACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCACCAAAGC
AGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACC
ACCCGATCATCTTCCGTGGCCTCAAATCCATCACCTTCAACGATCCTCAA
CAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCC
GCACACAGCCATCGACGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCG
ACATCGTCACCGGCGCCATCGCCCCAACAAGCACCACCAAGCCCACTATC
CAGAAATCCTCCTCAACACACTACTCCCACGCCACCTTCCCCGACCCACA
GCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCCGAACCACAATCATCC
CCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGC
ATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCAT
TGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCATCGCTATTCCGCAGA
CCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGC
TCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCT
GCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGC
GTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAATACGGAGCGCGGGTAT
CTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTG
GGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGG
TCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGAT
CCGTATGGTATTATGATTCGACAGGTCTAGATGTCTGCTTCATACCCCAC
TTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCATGAGGAAGCTCTACC
CCGAGTCATTGGCAGATAAGAGCTGGGACAACACCGGCCTCCTCCTCGAA
GCGCCCTTCGACCACACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAAT
TGACCTCACCAAAGCAGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAG
TAGTCGTAGCCTACCACCCGATCATCTTCCGTGGCCTCAAATCCATCACC
TTCAACGATCCTCAACAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCAT
CAGCGTCTACTCCCCGCACACAGCCATCGACGCAACCCCCGGCGGCATGG
CCGACTGGCTCTGCGACATCGTCACCGGCGCCATCGCCCCAACAAGCACC
ACCAAGCCCACTATCCAGAAATCCTCCTCAACACACTACTCCCACGCCAC
CTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCC
GAACCACAATCATCCCCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCA
GCGGGAATGGGGCGCATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGC
CGTCGTGGACCGCATTGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCA
TCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTC
GGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGG
GAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGT
TGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAAT
ACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGC
GGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTG
CGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGT
GAGAAGGATCGTGATCCGTATGGTATTATGATTCGACAGGTCTAGATGTC
TGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCA
TGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACAACACC
GGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAAAACTC
AGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGCAATTG
CCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCCGTGGC
CTCAAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTCCGTCT
CGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGACGCAA
CCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCGCCATC
GCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCAACACA
CTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTC
CCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAGTGCCC
GAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGACGAGCC
CCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGGATATC
CCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTG
AAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCT
GAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGA
GTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCG
CTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGA
GAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGG
GTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGT
GTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATGATTCG
ACAGGTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010820ATCC10864_010820Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010820-T1.exon1ATCC10864_010820-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010820-T1.exon2ATCC10864_010820-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010820-T1.exon3ATCC10864_010820-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010820-T1.exon4ATCC10864_010820-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010820-T1.cdsATCC10864_010820-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010820-T1ATCC10864_010820-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036069
InterProIPR002678
PFAMPF01784
Properties
Property NameValue
NoteBUSCO:EOG09263UQF
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:243663..244907 +
Powered by Drupal