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ATCC10864_010933-T1, ATCC10864_010933-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010933-T1
Unique NameATCC10864_010933-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:578601..580079-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010933-T1 ID=ATCC10864_010933-T1|Name=ATCC10864_010933-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1479bp|location=Sequence derived from alignment at MCQH01000246:578601..580079- (Aspergillus niger ATCC 10864)
ATGGTATTCGCTCATTACTTAACAGCAGCTTTCACCGTCGCCACTTTGGC
CGGTACCCCCGCTGCGATCGATCTCGACATCACCAACGAACGTACGTTCC
CCTATCTCAGGCATTAATCCAGATGAACCATCTAACCCCCCACAGAATCT
ATCAAAAATGCCGCCGCCACAGCCGCCTTCAACGCCATGTCCTACTACAC
AGGCAACCAGACCGGCCAGATTCCCGGAAAAATCAACCACACCTGGTGGG
AAGGCGGCGTACTATTCGACACAATGATCCGATACTGGTACTTCACCGAC
GACGCATCCAACAACGCCGCCGTCAGCCAGGGCATGTACCACCAACGTGG
CGCCGGCAACGACTACATGCCGAGCAACTGGTCCTCATACATCGCCAATG
ACGACCAGATGGCCTGGGGCCTTGCCGCCATGACGGCAGCAGAGCTGAAC
TACCCCGAAGACGCTGGAATGCCCTCGTGGGTGGATCTAGCGGAGCGGGT
ATTCGATGTGCAAGCCGCCCGCTGGGACAACAACACCTGCTCCGGCGGTC
TCCGGTGGCAGCTTTGGCCCTACCAAGCCGGATACGCGATGAAGAACGCA
ATGAGTAACGGGGGTTTCTTCCAACTTGCTGCGCGGTTGGCGCGGTATAC
CAACAACCAGACCTATGTGGATTGGGCAAACACGATCTGGGACTGGAGTA
CATCGCATCTTGTTCAGGAGGGCAGTTGGAATGTTGCTGATAGTACTAAT
ACGGAAAATGATTGTGCGACCCTGGGCAACAATCAGTGGTCGTATAACTA
CGGGGTGTTTCTGAGTGGCGCGGCATATATGTACAACTACGTAAGTGGCT
ATACACGCTCTACATATTGGACAGAGACTAACAAGAGATAGACAAACGGA
GAGACCAAGTGGAAGACCGGCCTGGATGGCCTTCTGAACACAACCTTTGG
AGAATTCTTCCCCCATAAATATGGCGGCGAAATCATGTCCGAGATCCTCT
GTGAACCTACGCAAGTGTGCAACGACGATGAGATAATTTTCAAGGGTCTC
CTGGCAGAAAGTCTCACCTTCACGAGCATGATAGCGCCGTATACATCATC
GGACATTCTTCCGCGCCTACAAGGCTCGGCTGTTGGCGCTGCGAAGCAGT
GCAGCGGCGGAAGTAGTAAGACAACCTGTGGACAGCGCTGGTACCAGTCG
ACCTGGGATGGGACGGAGGGCATTGAGGAGGAAATTAGTGCGACGAGCAT
CTTCACGTCGAATTTGGTGGTGTACAAACACCAGTCTCTGGCTACGAAGG
CTACCGCGACAAATGGAACCTCCGGCTCCACAGGTACGGAGAATGGTAAT
GGAACGACTACTGCCAGCACGGCAGCGGGAAGCAACAGTGTAGTTCCGAC
AAACGGTGCCAATTCTCTCGCTTATGGACCCCTTGGCGTTGCTGCCGCTA
TTCTTGCGGGTGTTGTTGCCATTGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000246:578601..580079-

>ATCC10864_010933-T1 ID=ATCC10864_010933-T1|Name=ATCC10864_010933-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4122bp|location=Sequence derived from alignment at MCQH01000246:578601..580079- (Aspergillus niger ATCC 10864)
ACAAACGGAGAGACCAAGTGGAAGACCGGCCTGGATGGCCTTCTGAACAC
AACCTTTGGAGAATTCTTCCCCCATAAATATGGCGGCGAAATCATGTCCG
AGATCCTCTGTGAACCTACGCAAGTGTGCAACGACGATGAGATAATTTTC
AAGGGTCTCCTGGCAGAAAGTCTCACCTTCACGAGCATGATAGCGCCGTA
TACATCATCGGACATTCTTCCGCGCCTACAAGGCTCGGCTGTTGGCGCTG
CGAAGCAGTGCAGCGGCGGAAGTAGTAAGACAACCTGTGGACAGCGCTGG
TACCAGTCGACCTGGGATGGGACGGAGGGCATTGAGGAGGAAATTAGTGC
GACGAGCATCTTCACGTCGAATTTGGTGGTGTACAAACACCAGTCTCTGG
CTACGAAGGCTACCGCGACAAATGGAACCTCCGGCTCCACAGGTACGGAG
AATGGTAATGGAACGACTACTGCCAGCACGGCAGCGGGAAGCAACAGTGT
AGTTCCGACAAACGGTGCCAATTCTCTCGCTTATGGACCCCTTGGCGTTG
CTGCCGCTATTCTTGCGGGTGTTGTTGCCATTGCTTAAAATCTATCAAAA
ATGCCGCCGCCACAGCCGCCTTCAACGCCATGTCCTACTACACAGGCAAC
CAGACCGGCCAGATTCCCGGAAAAATCAACCACACCTGGTGGGAAGGCGG
CGTACTATTCGACACAATGATCCGATACTGGTACTTCACCGACGACGCAT
CCAACAACGCCGCCGTCAGCCAGGGCATGTACCACCAACGTGGCGCCGGC
AACGACTACATGCCGAGCAACTGGTCCTCATACATCGCCAATGACGACCA
GATGGCCTGGGGCCTTGCCGCCATGACGGCAGCAGAGCTGAACTACCCCG
AAGACGCTGGAATGCCCTCGTGGGTGGATCTAGCGGAGCGGGTATTCGAT
GTGCAAGCCGCCCGCTGGGACAACAACACCTGCTCCGGCGGTCTCCGGTG
GCAGCTTTGGCCCTACCAAGCCGGATACGCGATGAAGAACGCAATGAGTA
ACGGGGGTTTCTTCCAACTTGCTGCGCGGTTGGCGCGGTATACCAACAAC
CAGACCTATGTGGATTGGGCAAACACGATCTGGGACTGGAGTACATCGCA
TCTTGTTCAGGAGGGCAGTTGGAATGTTGCTGATAGTACTAATACGGAAA
ATGATTGTGCGACCCTGGGCAACAATCAGTGGTCGTATAACTACGGGGTG
TTTCTGAGTGGCGCGGCATATATGTACAACTACATGGTATTCGCTCATTA
CTTAACAGCAGCTTTCACCGTCGCCACTTTGGCCGGTACCCCCGCTGCGA
TCGATCTCGACATCACCAACGAACACAAACGGAGAGACCAAGTGGAAGAC
CGGCCTGGATGGCCTTCTGAACACAACCTTTGGAGAATTCTTCCCCCATA
AATATGGCGGCGAAATCATGTCCGAGATCCTCTGTGAACCTACGCAAGTG
TGCAACGACGATGAGATAATTTTCAAGGGTCTCCTGGCAGAAAGTCTCAC
CTTCACGAGCATGATAGCGCCGTATACATCATCGGACATTCTTCCGCGCC
TACAAGGCTCGGCTGTTGGCGCTGCGAAGCAGTGCAGCGGCGGAAGTAGT
AAGACAACCTGTGGACAGCGCTGGTACCAGTCGACCTGGGATGGGACGGA
GGGCATTGAGGAGGAAATTAGTGCGACGAGCATCTTCACGTCGAATTTGG
TGGTGTACAAACACCAGTCTCTGGCTACGAAGGCTACCGCGACAAATGGA
ACCTCCGGCTCCACAGGTACGGAGAATGGTAATGGAACGACTACTGCCAG
CACGGCAGCGGGAAGCAACAGTGTAGTTCCGACAAACGGTGCCAATTCTC
TCGCTTATGGACCCCTTGGCGTTGCTGCCGCTATTCTTGCGGGTGTTGTT
GCCATTGCTTAAAATCTATCAAAAATGCCGCCGCCACAGCCGCCTTCAAC
GCCATGTCCTACTACACAGGCAACCAGACCGGCCAGATTCCCGGAAAAAT
CAACCACACCTGGTGGGAAGGCGGCGTACTATTCGACACAATGATCCGAT
ACTGGTACTTCACCGACGACGCATCCAACAACGCCGCCGTCAGCCAGGGC
ATGTACCACCAACGTGGCGCCGGCAACGACTACATGCCGAGCAACTGGTC
CTCATACATCGCCAATGACGACCAGATGGCCTGGGGCCTTGCCGCCATGA
CGGCAGCAGAGCTGAACTACCCCGAAGACGCTGGAATGCCCTCGTGGGTG
GATCTAGCGGAGCGGGTATTCGATGTGCAAGCCGCCCGCTGGGACAACAA
CACCTGCTCCGGCGGTCTCCGGTGGCAGCTTTGGCCCTACCAAGCCGGAT
ACGCGATGAAGAACGCAATGAGTAACGGGGGTTTCTTCCAACTTGCTGCG
CGGTTGGCGCGGTATACCAACAACCAGACCTATGTGGATTGGGCAAACAC
GATCTGGGACTGGAGTACATCGCATCTTGTTCAGGAGGGCAGTTGGAATG
TTGCTGATAGTACTAATACGGAAAATGATTGTGCGACCCTGGGCAACAAT
CAGTGGTCGTATAACTACGGGGTGTTTCTGAGTGGCGCGGCATATATGTA
CAACTACATGGTATTCGCTCATTACTTAACAGCAGCTTTCACCGTCGCCA
CTTTGGCCGGTACCCCCGCTGCGATCGATCTCGACATCACCAACGAACAC
AAACGGAGAGACCAAGTGGAAGACCGGCCTGGATGGCCTTCTGAACACAA
CCTTTGGAGAATTCTTCCCCCATAAATATGGCGGCGAAATCATGTCCGAG
ATCCTCTGTGAACCTACGCAAGTGTGCAACGACGATGAGATAATTTTCAA
GGGTCTCCTGGCAGAAAGTCTCACCTTCACGAGCATGATAGCGCCGTATA
CATCATCGGACATTCTTCCGCGCCTACAAGGCTCGGCTGTTGGCGCTGCG
AAGCAGTGCAGCGGCGGAAGTAGTAAGACAACCTGTGGACAGCGCTGGTA
CCAGTCGACCTGGGATGGGACGGAGGGCATTGAGGAGGAAATTAGTGCGA
CGAGCATCTTCACGTCGAATTTGGTGGTGTACAAACACCAGTCTCTGGCT
ACGAAGGCTACCGCGACAAATGGAACCTCCGGCTCCACAGGTACGGAGAA
TGGTAATGGAACGACTACTGCCAGCACGGCAGCGGGAAGCAACAGTGTAG
TTCCGACAAACGGTGCCAATTCTCTCGCTTATGGACCCCTTGGCGTTGCT
GCCGCTATTCTTGCGGGTGTTGTTGCCATTGCTTAAAATCTATCAAAAAT
GCCGCCGCCACAGCCGCCTTCAACGCCATGTCCTACTACACAGGCAACCA
GACCGGCCAGATTCCCGGAAAAATCAACCACACCTGGTGGGAAGGCGGCG
TACTATTCGACACAATGATCCGATACTGGTACTTCACCGACGACGCATCC
AACAACGCCGCCGTCAGCCAGGGCATGTACCACCAACGTGGCGCCGGCAA
CGACTACATGCCGAGCAACTGGTCCTCATACATCGCCAATGACGACCAGA
TGGCCTGGGGCCTTGCCGCCATGACGGCAGCAGAGCTGAACTACCCCGAA
GACGCTGGAATGCCCTCGTGGGTGGATCTAGCGGAGCGGGTATTCGATGT
GCAAGCCGCCCGCTGGGACAACAACACCTGCTCCGGCGGTCTCCGGTGGC
AGCTTTGGCCCTACCAAGCCGGATACGCGATGAAGAACGCAATGAGTAAC
GGGGGTTTCTTCCAACTTGCTGCGCGGTTGGCGCGGTATACCAACAACCA
GACCTATGTGGATTGGGCAAACACGATCTGGGACTGGAGTACATCGCATC
TTGTTCAGGAGGGCAGTTGGAATGTTGCTGATAGTACTAATACGGAAAAT
GATTGTGCGACCCTGGGCAACAATCAGTGGTCGTATAACTACGGGGTGTT
TCTGAGTGGCGCGGCATATATGTACAACTACATGGTATTCGCTCATTACT
TAACAGCAGCTTTCACCGTCGCCACTTTGGCCGGTACCCCCGCTGCGATC
GATCTCGACATCACCAACGAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010933ATCC10864_010933Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010933-T1ATCC10864_010933-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010933-T1.cdsATCC10864_010933-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010933-T1.exon3ATCC10864_010933-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010933-T1.exon2ATCC10864_010933-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010933-T1.exon1ATCC10864_010933-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteantiSMASH:Cluster_1000246.2
NoteCAZy:GH76
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:578601..580079 -
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