|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000246:588155..590343- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010936-T1 ID=ATCC10864_010936-T1|Name=ATCC10864_010936-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2189bp|location=Sequence derived from alignment at MCQH01000246:588155..590343- (Aspergillus niger ATCC 10864)
ATGTCCGCTCCACGCCGTAATGGACAATTATCATCCTGTGAGCCTTGCAG
GAAGTCCAAGCTCCGATGCGATCATTCAGCCCCAACATGTAATCGATGCG
TCCGTCGGGGTAAAGCGGACCTCTGTGTTTACCACCCAGCTCCGCTCACC
AAGCCGCGCGAATTATCACGACCACTCAAGGCAATCAGGACAGCAACCAA
GGAACAAATGCTGGTGCCTGCAAAGACGCTGAAATGGGATAGTCTGAGCG
CTTCATCTCCAGCGACTGTGTTAACTCCAGCCGCATTTCCCAACCCGTCG
AAGCTTCCATTTTCAGGATCGGGGTTCCTGGGTCCTACCAGTTACTCAGG
TGCATTCAGCAATAGTGAGCTTGATGTCGTGGATTTCCCATCGTCTACAC
GGTCAACCCCCATCGACCCTCAACAGGTGGCGCGGGGTGCTCAGGTCCTC
TTTCTCTTGGAGCATCTACCCCTATTTGCTGAGATTTCAAAGAAGCGCTT
CACCATTTCGCCGGGATGGGTTTTCGGTAGCCCTCTGATGGATCAATTGT
TCAAGGTCCTGGAAGAGGTCTACCGCAATGCAACCCAGGACTCGGGGAAC
AAGTATGCACGCCTGCTAGATCTCTCCAGGACTTTCTTCAAAAATACCGT
AACTCCTATCGTGACCCATGAGTCGATGACCTTGGCCGAATATTTCTCTT
TAGCAGCGCCGCGCTGGGAGATGCTAAGTTTACTTTTCGGCTTTGCTGGT
ACGGCAACATATCAACTACCACCACATAGTCTGGGGTTAGAGCATCAGGA
CGAAATTACGAGCAAGGAAGGATTGCGACAAATATGCATCCAGGCTAGCC
AGACATGTCTGCAATTTTGCAATCATCTAGGCACGCTGAGTGACCCTTTG
TCGTGGGCCATGGTCCAGCATGCAATCTATCTATCGCATATGCACGGGAG
TAGCGGTATGTTACTGACTGTATAACATCGATCATGTAGTAGCTAAGACG
AAGCAAGATCACAGAACGTGGCAGATGCTAGGGGAGATCACGACGACAGT
CTTTGCACTTGGCCTGCACCAGCCGGACACTGATAACACAGCTCCATTCT
TTTTGAAGGAGATACGAAAAAGAACGATGGTTGGTGCATATGCTCTTGAC
AAAGAACTTGCAACATTCCTAGGCAGGCCCCCACGGATATGTTGGCGTTA
TTGCAACATCCAATACCCATTGGACATGAGCTACGAGGAGATTGTTGCCG
AACCCGCGATAAGAGATGCAGCTATTGCACGCTTAGATCCGGAAGGTTGG
AACATCGATGGTTGTATCGATAAGGGGGCCAAGGCTCGAGCTAGACTGGC
TGCTAGTATCGATGAAGAAAACGCGTTGGAAATATCACTCAGTAATAGGC
TAGACGGATTAGAGGAGAAGGTCCAGTGTGTGAGCACCAGATTATAACTC
CGATTAGACTGGTATTAACTAATAACTGCTGAACAGAAAGGCTCGCAAGA
AATCAGACGAACTACGGCGCAGTCTTCCTCCGTACCTCCAGTGGACAGAA
GATAAAACAGATCCCCAAGTTGCATCGTTTCATATCGAGTTTCTTTATCA
CGAGTTCTTGCTATTGCAAACTCTCTACAAACGGGTTGGAAAGGGTATCG
ATGATTTCGTCAACAAAGCTTTGGAGATTATTAGCATCCTACTACATATG
GTATCACTGGAGACTCGCTCAGGTCAAGTCCACCCAACCGTCATTTTGGA
TGTAAGTTCATCCATGCACACGTATCATTGCTCCAAAACCTCACAACCCC
AGCTATGCTACATAGGTCTTCCTGCCGCCGGTACCCTCTGCACCGAGCTT
CTGCGACGATCCCAGCCCCAAGCAAGCGTAGCCACCGCATCACCACAAAC
ACCGTTCCCCCGTTCAGATATCATACAGAAGTTGAGCGTATTTGTCGCGC
AATTGAAAACATTTGCTCGTCAGCAAGAAGGTGACTACGAGATCTGCATC
AAGGGGGAGAGGATCATCTCCCAGGCTTTGGATCGGGTGCTCTCACCAGC
TCCGGTAGGAGTGGTAGCCTCTAGTGATGACCCTTGGAATAATGAGCTCC
CAGGAGGGGATATTGGCGATACTGACTTCATGGCGTTTTTGGAGAACTTT
GACTGGGAGCAAGAGATGAGGTTGACGTTTGGGTGTTGA back to topCoding sequence (CDS) from alignment at MCQH01000246:588155..590343- >ATCC10864_010936-T1 ID=ATCC10864_010936-T1|Name=ATCC10864_010936-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=8100bp|location=Sequence derived from alignment at MCQH01000246:588155..590343- (Aspergillus niger ATCC 10864)
CTATGCTACATAGGTCTTCCTGCCGCCGGTACCCTCTGCACCGAGCTTCT
GCGACGATCCCAGCCCCAAGCAAGCGTAGCCACCGCATCACCACAAACAC
CGTTCCCCCGTTCAGATATCATACAGAAGTTGAGCGTATTTGTCGCGCAA
TTGAAAACATTTGCTCGTCAGCAAGAAGGTGACTACGAGATCTGCATCAA
GGGGGAGAGGATCATCTCCCAGGCTTTGGATCGGGTGCTCTCACCAGCTC
CGGTAGGAGTGGTAGCCTCTAGTGATGACCCTTGGAATAATGAGCTCCCA
GGAGGGGATATTGGCGATACTGACTTCATGGCGTTTTTGGAGAACTTTGA
CTGGGAGCAAGAGATGAGGTTGACGTTTGGGTGTTGAAAAGGCTCGCAAG
AAATCAGACGAACTACGGCGCAGTCTTCCTCCGTACCTCCAGTGGACAGA
AGATAAAACAGATCCCCAAGTTGCATCGTTTCATATCGAGTTTCTTTATC
ACGAGTTCTTGCTATTGCAAACTCTCTACAAACGGGTTGGAAAGGGTATC
GATGATTTCGTCAACAAAGCTTTGGAGATTATTAGCATCCTACTACATAT
GGTATCACTGGAGACTCGCTCAGGTCAAGTCCACCCAACCGTCATTTTGG
ATATCACAGAACGTGGCAGATGCTAGGGGAGATCACGACGACAGTCTTTG
CACTTGGCCTGCACCAGCCGGACACTGATAACACAGCTCCATTCTTTTTG
AAGGAGATACGAAAAAGAACGATGGTTGGTGCATATGCTCTTGACAAAGA
ACTTGCAACATTCCTAGGCAGGCCCCCACGGATATGTTGGCGTTATTGCA
ACATCCAATACCCATTGGACATGAGCTACGAGGAGATTGTTGCCGAACCC
GCGATAAGAGATGCAGCTATTGCACGCTTAGATCCGGAAGGTTGGAACAT
CGATGGTTGTATCGATAAGGGGGCCAAGGCTCGAGCTAGACTGGCTGCTA
GTATCGATGAAGAAAACGCGTTGGAAATATCACTCAGTAATAGGCTAGAC
GGATTAGAGGAGAAGGTCCAATGTCCGCTCCACGCCGTAATGGACAATTA
TCATCCTGTGAGCCTTGCAGGAAGTCCAAGCTCCGATGCGATCATTCAGC
CCCAACATGTAATCGATGCGTCCGTCGGGGTAAAGCGGACCTCTGTGTTT
ACCACCCAGCTCCGCTCACCAAGCCGCGCGAATTATCACGACCACTCAAG
GCAATCAGGACAGCAACCAAGGAACAAATGCTGGTGCCTGCAAAGACGCT
GAAATGGGATAGTCTGAGCGCTTCATCTCCAGCGACTGTGTTAACTCCAG
CCGCATTTCCCAACCCGTCGAAGCTTCCATTTTCAGGATCGGGGTTCCTG
GGTCCTACCAGTTACTCAGGTGCATTCAGCAATAGTGAGCTTGATGTCGT
GGATTTCCCATCGTCTACACGGTCAACCCCCATCGACCCTCAACAGGTGG
CGCGGGGTGCTCAGGTCCTCTTTCTCTTGGAGCATCTACCCCTATTTGCT
GAGATTTCAAAGAAGCGCTTCACCATTTCGCCGGGATGGGTTTTCGGTAG
CCCTCTGATGGATCAATTGTTCAAGGTCCTGGAAGAGGTCTACCGCAATG
CAACCCAGGACTCGGGGAACAAGTATGCACGCCTGCTAGATCTCTCCAGG
ACTTTCTTCAAAAATACCGTAACTCCTATCGTGACCCATGAGTCGATGAC
CTTGGCCGAATATTTCTCTTTAGCAGCGCCGCGCTGGGAGATGCTAAGTT
TACTTTTCGGCTTTGCTGGTACGGCAACATATCAACTACCACCACATAGT
CTGGGGTTAGAGCATCAGGACGAAATTACGAGCAAGGAAGGATTGCGACA
AATATGCATCCAGGCTAGCCAGACATGTCTGCAATTTTGCAATCATCTAG
GCACGCTGAGTGACCCTTTGTCGTGGGCCATGGTCCAGCATGCAATCTAT
CTATCGCATATGCACGGGAGTAGCGCTATGCTACATAGGTCTTCCTGCCG
CCGGTACCCTCTGCACCGAGCTTCTGCGACGATCCCAGCCCCAAGCAAGC
GTAGCCACCGCATCACCACAAACACCGTTCCCCCGTTCAGATATCATACA
GAAGTTGAGCGTATTTGTCGCGCAATTGAAAACATTTGCTCGTCAGCAAG
AAGGTGACTACGAGATCTGCATCAAGGGGGAGAGGATCATCTCCCAGGCT
TTGGATCGGGTGCTCTCACCAGCTCCGGTAGGAGTGGTAGCCTCTAGTGA
TGACCCTTGGAATAATGAGCTCCCAGGAGGGGATATTGGCGATACTGACT
TCATGGCGTTTTTGGAGAACTTTGACTGGGAGCAAGAGATGAGGTTGACG
TTTGGGTGTTGAAAAGGCTCGCAAGAAATCAGACGAACTACGGCGCAGTC
TTCCTCCGTACCTCCAGTGGACAGAAGATAAAACAGATCCCCAAGTTGCA
TCGTTTCATATCGAGTTTCTTTATCACGAGTTCTTGCTATTGCAAACTCT
CTACAAACGGGTTGGAAAGGGTATCGATGATTTCGTCAACAAAGCTTTGG
AGATTATTAGCATCCTACTACATATGGTATCACTGGAGACTCGCTCAGGT
CAAGTCCACCCAACCGTCATTTTGGATATCACAGAACGTGGCAGATGCTA
GGGGAGATCACGACGACAGTCTTTGCACTTGGCCTGCACCAGCCGGACAC
TGATAACACAGCTCCATTCTTTTTGAAGGAGATACGAAAAAGAACGATGG
TTGGTGCATATGCTCTTGACAAAGAACTTGCAACATTCCTAGGCAGGCCC
CCACGGATATGTTGGCGTTATTGCAACATCCAATACCCATTGGACATGAG
CTACGAGGAGATTGTTGCCGAACCCGCGATAAGAGATGCAGCTATTGCAC
GCTTAGATCCGGAAGGTTGGAACATCGATGGTTGTATCGATAAGGGGGCC
AAGGCTCGAGCTAGACTGGCTGCTAGTATCGATGAAGAAAACGCGTTGGA
AATATCACTCAGTAATAGGCTAGACGGATTAGAGGAGAAGGTCCAATGTC
CGCTCCACGCCGTAATGGACAATTATCATCCTGTGAGCCTTGCAGGAAGT
CCAAGCTCCGATGCGATCATTCAGCCCCAACATGTAATCGATGCGTCCGT
CGGGGTAAAGCGGACCTCTGTGTTTACCACCCAGCTCCGCTCACCAAGCC
GCGCGAATTATCACGACCACTCAAGGCAATCAGGACAGCAACCAAGGAAC
AAATGCTGGTGCCTGCAAAGACGCTGAAATGGGATAGTCTGAGCGCTTCA
TCTCCAGCGACTGTGTTAACTCCAGCCGCATTTCCCAACCCGTCGAAGCT
TCCATTTTCAGGATCGGGGTTCCTGGGTCCTACCAGTTACTCAGGTGCAT
TCAGCAATAGTGAGCTTGATGTCGTGGATTTCCCATCGTCTACACGGTCA
ACCCCCATCGACCCTCAACAGGTGGCGCGGGGTGCTCAGGTCCTCTTTCT
CTTGGAGCATCTACCCCTATTTGCTGAGATTTCAAAGAAGCGCTTCACCA
TTTCGCCGGGATGGGTTTTCGGTAGCCCTCTGATGGATCAATTGTTCAAG
GTCCTGGAAGAGGTCTACCGCAATGCAACCCAGGACTCGGGGAACAAGTA
TGCACGCCTGCTAGATCTCTCCAGGACTTTCTTCAAAAATACCGTAACTC
CTATCGTGACCCATGAGTCGATGACCTTGGCCGAATATTTCTCTTTAGCA
GCGCCGCGCTGGGAGATGCTAAGTTTACTTTTCGGCTTTGCTGGTACGGC
AACATATCAACTACCACCACATAGTCTGGGGTTAGAGCATCAGGACGAAA
TTACGAGCAAGGAAGGATTGCGACAAATATGCATCCAGGCTAGCCAGACA
TGTCTGCAATTTTGCAATCATCTAGGCACGCTGAGTGACCCTTTGTCGTG
GGCCATGGTCCAGCATGCAATCTATCTATCGCATATGCACGGGAGTAGCG
CTATGCTACATAGGTCTTCCTGCCGCCGGTACCCTCTGCACCGAGCTTCT
GCGACGATCCCAGCCCCAAGCAAGCGTAGCCACCGCATCACCACAAACAC
CGTTCCCCCGTTCAGATATCATACAGAAGTTGAGCGTATTTGTCGCGCAA
TTGAAAACATTTGCTCGTCAGCAAGAAGGTGACTACGAGATCTGCATCAA
GGGGGAGAGGATCATCTCCCAGGCTTTGGATCGGGTGCTCTCACCAGCTC
CGGTAGGAGTGGTAGCCTCTAGTGATGACCCTTGGAATAATGAGCTCCCA
GGAGGGGATATTGGCGATACTGACTTCATGGCGTTTTTGGAGAACTTTGA
CTGGGAGCAAGAGATGAGGTTGACGTTTGGGTGTTGAAAAGGCTCGCAAG
AAATCAGACGAACTACGGCGCAGTCTTCCTCCGTACCTCCAGTGGACAGA
AGATAAAACAGATCCCCAAGTTGCATCGTTTCATATCGAGTTTCTTTATC
ACGAGTTCTTGCTATTGCAAACTCTCTACAAACGGGTTGGAAAGGGTATC
GATGATTTCGTCAACAAAGCTTTGGAGATTATTAGCATCCTACTACATAT
GGTATCACTGGAGACTCGCTCAGGTCAAGTCCACCCAACCGTCATTTTGG
ATATCACAGAACGTGGCAGATGCTAGGGGAGATCACGACGACAGTCTTTG
CACTTGGCCTGCACCAGCCGGACACTGATAACACAGCTCCATTCTTTTTG
AAGGAGATACGAAAAAGAACGATGGTTGGTGCATATGCTCTTGACAAAGA
ACTTGCAACATTCCTAGGCAGGCCCCCACGGATATGTTGGCGTTATTGCA
ACATCCAATACCCATTGGACATGAGCTACGAGGAGATTGTTGCCGAACCC
GCGATAAGAGATGCAGCTATTGCACGCTTAGATCCGGAAGGTTGGAACAT
CGATGGTTGTATCGATAAGGGGGCCAAGGCTCGAGCTAGACTGGCTGCTA
GTATCGATGAAGAAAACGCGTTGGAAATATCACTCAGTAATAGGCTAGAC
GGATTAGAGGAGAAGGTCCAATGTCCGCTCCACGCCGTAATGGACAATTA
TCATCCTGTGAGCCTTGCAGGAAGTCCAAGCTCCGATGCGATCATTCAGC
CCCAACATGTAATCGATGCGTCCGTCGGGGTAAAGCGGACCTCTGTGTTT
ACCACCCAGCTCCGCTCACCAAGCCGCGCGAATTATCACGACCACTCAAG
GCAATCAGGACAGCAACCAAGGAACAAATGCTGGTGCCTGCAAAGACGCT
GAAATGGGATAGTCTGAGCGCTTCATCTCCAGCGACTGTGTTAACTCCAG
CCGCATTTCCCAACCCGTCGAAGCTTCCATTTTCAGGATCGGGGTTCCTG
GGTCCTACCAGTTACTCAGGTGCATTCAGCAATAGTGAGCTTGATGTCGT
GGATTTCCCATCGTCTACACGGTCAACCCCCATCGACCCTCAACAGGTGG
CGCGGGGTGCTCAGGTCCTCTTTCTCTTGGAGCATCTACCCCTATTTGCT
GAGATTTCAAAGAAGCGCTTCACCATTTCGCCGGGATGGGTTTTCGGTAG
CCCTCTGATGGATCAATTGTTCAAGGTCCTGGAAGAGGTCTACCGCAATG
CAACCCAGGACTCGGGGAACAAGTATGCACGCCTGCTAGATCTCTCCAGG
ACTTTCTTCAAAAATACCGTAACTCCTATCGTGACCCATGAGTCGATGAC
CTTGGCCGAATATTTCTCTTTAGCAGCGCCGCGCTGGGAGATGCTAAGTT
TACTTTTCGGCTTTGCTGGTACGGCAACATATCAACTACCACCACATAGT
CTGGGGTTAGAGCATCAGGACGAAATTACGAGCAAGGAAGGATTGCGACA
AATATGCATCCAGGCTAGCCAGACATGTCTGCAATTTTGCAATCATCTAG
GCACGCTGAGTGACCCTTTGTCGTGGGCCATGGTCCAGCATGCAATCTAT
CTATCGCATATGCACGGGAGTAGCGCTATGCTACATAGGTCTTCCTGCCG
CCGGTACCCTCTGCACCGAGCTTCTGCGACGATCCCAGCCCCAAGCAAGC
GTAGCCACCGCATCACCACAAACACCGTTCCCCCGTTCAGATATCATACA
GAAGTTGAGCGTATTTGTCGCGCAATTGAAAACATTTGCTCGTCAGCAAG
AAGGTGACTACGAGATCTGCATCAAGGGGGAGAGGATCATCTCCCAGGCT
TTGGATCGGGTGCTCTCACCAGCTCCGGTAGGAGTGGTAGCCTCTAGTGA
TGACCCTTGGAATAATGAGCTCCCAGGAGGGGATATTGGCGATACTGACT
TCATGGCGTTTTTGGAGAACTTTGACTGGGAGCAAGAGATGAGGTTGACG
TTTGGGTGTTGAAAAGGCTCGCAAGAAATCAGACGAACTACGGCGCAGTC
TTCCTCCGTACCTCCAGTGGACAGAAGATAAAACAGATCCCCAAGTTGCA
TCGTTTCATATCGAGTTTCTTTATCACGAGTTCTTGCTATTGCAAACTCT
CTACAAACGGGTTGGAAAGGGTATCGATGATTTCGTCAACAAAGCTTTGG
AGATTATTAGCATCCTACTACATATGGTATCACTGGAGACTCGCTCAGGT
CAAGTCCACCCAACCGTCATTTTGGATATCACAGAACGTGGCAGATGCTA
GGGGAGATCACGACGACAGTCTTTGCACTTGGCCTGCACCAGCCGGACAC
TGATAACACAGCTCCATTCTTTTTGAAGGAGATACGAAAAAGAACGATGG
TTGGTGCATATGCTCTTGACAAAGAACTTGCAACATTCCTAGGCAGGCCC
CCACGGATATGTTGGCGTTATTGCAACATCCAATACCCATTGGACATGAG
CTACGAGGAGATTGTTGCCGAACCCGCGATAAGAGATGCAGCTATTGCAC
GCTTAGATCCGGAAGGTTGGAACATCGATGGTTGTATCGATAAGGGGGCC
AAGGCTCGAGCTAGACTGGCTGCTAGTATCGATGAAGAAAACGCGTTGGA
AATATCACTCAGTAATAGGCTAGACGGATTAGAGGAGAAGGTCCAATGTC
CGCTCCACGCCGTAATGGACAATTATCATCCTGTGAGCCTTGCAGGAAGT
CCAAGCTCCGATGCGATCATTCAGCCCCAACATGTAATCGATGCGTCCGT
CGGGGTAAAGCGGACCTCTGTGTTTACCACCCAGCTCCGCTCACCAAGCC
GCGCGAATTATCACGACCACTCAAGGCAATCAGGACAGCAACCAAGGAAC
AAATGCTGGTGCCTGCAAAGACGCTGAAATGGGATAGTCTGAGCGCTTCA
TCTCCAGCGACTGTGTTAACTCCAGCCGCATTTCCCAACCCGTCGAAGCT
TCCATTTTCAGGATCGGGGTTCCTGGGTCCTACCAGTTACTCAGGTGCAT
TCAGCAATAGTGAGCTTGATGTCGTGGATTTCCCATCGTCTACACGGTCA
ACCCCCATCGACCCTCAACAGGTGGCGCGGGGTGCTCAGGTCCTCTTTCT
CTTGGAGCATCTACCCCTATTTGCTGAGATTTCAAAGAAGCGCTTCACCA
TTTCGCCGGGATGGGTTTTCGGTAGCCCTCTGATGGATCAATTGTTCAAG
GTCCTGGAAGAGGTCTACCGCAATGCAACCCAGGACTCGGGGAACAAGTA
TGCACGCCTGCTAGATCTCTCCAGGACTTTCTTCAAAAATACCGTAACTC
CTATCGTGACCCATGAGTCGATGACCTTGGCCGAATATTTCTCTTTAGCA
GCGCCGCGCTGGGAGATGCTAAGTTTACTTTTCGGCTTTGCTGGTACGGC
AACATATCAACTACCACCACATAGTCTGGGGTTAGAGCATCAGGACGAAA
TTACGAGCAAGGAAGGATTGCGACAAATATGCATCCAGGCTAGCCAGACA
TGTCTGCAATTTTGCAATCATCTAGGCACGCTGAGTGACCCTTTGTCGTG
GGCCATGGTCCAGCATGCAATCTATCTATCGCATATGCACGGGAGTAGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR007219 |
| InterPro | IPR001138 |
| PFAM | PF00172 |
| InterPro | IPR036864 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000246 | supercontig | MCQH01000246:588155..590343 - |
|
