You are here

Home

ATCC10864_011011-T1, ATCC10864_011011-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011011-T1
Unique NameATCC10864_011011-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:806182..807873+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011011-T1 ID=ATCC10864_011011-T1|Name=ATCC10864_011011-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1692bp|location=Sequence derived from alignment at MCQH01000246:806182..807873+ (Aspergillus niger ATCC 10864)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:806182..807873+

>ATCC10864_011011-T1 ID=ATCC10864_011011-T1|Name=ATCC10864_011011-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1692bp|location=Sequence derived from alignment at MCQH01000246:806182..807873+ (Aspergillus niger ATCC 10864)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011011ATCC10864_011011Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011011-T1.exon1ATCC10864_011011-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011011-T1.cdsATCC10864_011011-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011011-T1ATCC10864_011011-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:806182..807873 +
Powered by Drupal