You are here

Home

ATCC10864_011025-T1, ATCC10864_011025-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011025-T1
Unique NameATCC10864_011025-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:859838..860935+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011025-T1 ID=ATCC10864_011025-T1|Name=ATCC10864_011025-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1098bp|location=Sequence derived from alignment at MCQH01000246:859838..860935+ (Aspergillus niger ATCC 10864)
ATGTTCTACCTTAGGTATCTCCCATTCGTGGCCACCCCCCTTCTTGCTGC
GAGTGCCTTCAGCCACGCGTCGGGAGCCGAAGACTTGGCTGTCCTTGCCG
GACAGCACATCGTTTACACCTATCCCGGCATCAGTCCGCCGGATGCCTTG
TTCGATCTCGTGAATGAGGGCAAAGTCGGGGGCCTCATTCTCTTTCGCGA
AAACATCAACCAGACAAATTTGACAGAAACATCAGTATTGATGAGAAAGT
TACAACAAGCACACGCCAAATCCCCTGCGTATAAGGGCCTCCCACTGCCA
ATCATGATCGACCAGGAGGGCGGCTATGTGAAGCGTATTACCAACGGAGG
ACCATGGGAGTCTGCTAAAGAGATGGGGCTCGCTAGAGACCCTACTCTCG
CATCGTCGCACGGAGGCAGTGCTGCAGCTGATGCCCTTGTAGCAGCCGGA
GTTAACGTTAATCTTGCTCCAGTATTGGATGTTTACCGCGAGGAGTCAAG
CTTCATGAACTACTGGCAACGATCATTTGGGAATACATCCTCGCTTGTCA
CCCGTTGTGCGGTTTCTTTCCTCTCAGCTATGCGGAAAAAAGGAATTGCG
GCAGCTGGAAAGCACTTCCCTGGAAACGGTGCTAATCCAGCTGGCAACGA
CACAGACGCCGGCGTTGTTACTCTTGACCTAACTCTCGACGAGATTCGAG
CTGTGGATGAAATCCCATACCGTTCAGCTATCCAGGCAGGCCTTGGTTTG
ATCATGGCCTCATGGAGCAAGTATATCATGGTAGATGACCGGCCGGCAGG
ATTGAGCAGGAAATGGCTTGAGGGAGAACTACGAAGCAGATTAGGATACA
ATGGCGTGATCATGACGGATGCGCTTGAGGCTGGAGCAGTAAAGCCGTAT
GGGGACTGGTCTACAGTAGCACTTCTAGCCAAGCAAGCAGGTGCAGACAT
GATCCTTTGTGCTTCACGAAACCTGACCGAGGGCCTGATGGCGACAGAAG
GACTCGTTGCGGGGTTGAAGAATGGAAGCTTATCTCGAACAGCCTTGGAG
GCATCATTCGAGCGAATTATGGCTTTCCGGAGTACCCTGCGAGGGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:859838..860935+

>ATCC10864_011025-T1 ID=ATCC10864_011025-T1|Name=ATCC10864_011025-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1098bp|location=Sequence derived from alignment at MCQH01000246:859838..860935+ (Aspergillus niger ATCC 10864)
ATGTTCTACCTTAGGTATCTCCCATTCGTGGCCACCCCCCTTCTTGCTGC
GAGTGCCTTCAGCCACGCGTCGGGAGCCGAAGACTTGGCTGTCCTTGCCG
GACAGCACATCGTTTACACCTATCCCGGCATCAGTCCGCCGGATGCCTTG
TTCGATCTCGTGAATGAGGGCAAAGTCGGGGGCCTCATTCTCTTTCGCGA
AAACATCAACCAGACAAATTTGACAGAAACATCAGTATTGATGAGAAAGT
TACAACAAGCACACGCCAAATCCCCTGCGTATAAGGGCCTCCCACTGCCA
ATCATGATCGACCAGGAGGGCGGCTATGTGAAGCGTATTACCAACGGAGG
ACCATGGGAGTCTGCTAAAGAGATGGGGCTCGCTAGAGACCCTACTCTCG
CATCGTCGCACGGAGGCAGTGCTGCAGCTGATGCCCTTGTAGCAGCCGGA
GTTAACGTTAATCTTGCTCCAGTATTGGATGTTTACCGCGAGGAGTCAAG
CTTCATGAACTACTGGCAACGATCATTTGGGAATACATCCTCGCTTGTCA
CCCGTTGTGCGGTTTCTTTCCTCTCAGCTATGCGGAAAAAAGGAATTGCG
GCAGCTGGAAAGCACTTCCCTGGAAACGGTGCTAATCCAGCTGGCAACGA
CACAGACGCCGGCGTTGTTACTCTTGACCTAACTCTCGACGAGATTCGAG
CTGTGGATGAAATCCCATACCGTTCAGCTATCCAGGCAGGCCTTGGTTTG
ATCATGGCCTCATGGAGCAAGTATATCATGGTAGATGACCGGCCGGCAGG
ATTGAGCAGGAAATGGCTTGAGGGAGAACTACGAAGCAGATTAGGATACA
ATGGCGTGATCATGACGGATGCGCTTGAGGCTGGAGCAGTAAAGCCGTAT
GGGGACTGGTCTACAGTAGCACTTCTAGCCAAGCAAGCAGGTGCAGACAT
GATCCTTTGTGCTTCACGAAACCTGACCGAGGGCCTGATGGCGACAGAAG
GACTCGTTGCGGGGTTGAAGAATGGAAGCTTATCTCGAACAGCCTTGGAG
GCATCATTCGAGCGAATTATGGCTTTCCGGAGTACCCTGCGAGGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011025ATCC10864_011025Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011025-T1.exon1ATCC10864_011025-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011025-T1.cdsATCC10864_011025-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011025-T1ATCC10864_011025-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036962
InterProIPR017853
InterProIPR001764
PFAMPF00933
Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
NoteCAZy:GH3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:859838..860935 +
Powered by Drupal