You are here

Home

ATCC10864_011037-T1, ATCC10864_011037-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011037-T1
Unique NameATCC10864_011037-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000253:39566..40807+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011037-T1 ID=ATCC10864_011037-T1|Name=ATCC10864_011037-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1242bp|location=Sequence derived from alignment at MCQH01000253:39566..40807+ (Aspergillus niger ATCC 10864)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGTTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGGGGTGGTACTGCCCCGGATGCATCTATC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCTGCCGGCCAAGCGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
ACCCCTGTCAAAGAGGAAGCACCTGTCAAGGAAGAGCCGGTTGAGAAGCC
GCAAAAGGCACGACGGATGCCCGCGCGCAAGATCAAAATCGAGAATGGTG
GTTATTCCATGGAGCCGCCGTCTAACTGGGAGACTATGTATGACATGGTC
AAGAAGATGCGAGAGGCAAATCCCACTGCACCCGTTGACACCATGGGCTG
TGCCGAACTCTACTGGCGTGCATCCTCTCCGCGCGATCGCCGTTTCCAGA
CTCTCATCGCGCTAATGCTATCATCCCAGACCAAGGACACAGTCACGGCG
GTGGCCATGCAGCGGTTGCACACGGAGCTTGGAGACCAGTCGACAACCAT
TGTGAAGAAGGAGCCCGAAGATTATGACTGGAAGCCCACGGACCAGGTCA
AGGACAGCACTTTGAACCTGGAGAACATCCTAGCCGTCACCCCTGAGCGC
CTGAACGAACTTATTGCCAAGGTGGGCTTCCACAACAACAAGACCAAGTA
TATCAAGGCCGCGGCCATCATCCTCCGCGATCAATATGACTCCGATATCC
CGTCGACTGCTCCTGAACTGATGAAGCTCCCGGGCGTCGGTCCGAAGATG
GCGTTTCTCTGTATGAGCGCGGCGTGGGGCAAGCACGAAGGCATTGGCGT
TGATGTTCACGTTCACCGGATTACCAACCTCTGGGGCTGGCACAAGACGA
AGAATCCCGAGGAAACTCGCATGGCGCTGGAGTCGTGGCTACCAAAAGAC
AAGTGGCACGAGATCAACAAACTCTTGGTCGGCTTAGGACAGACGGTCTG
CTTACCTGTAGCCCGGAGATGCGGAGAATGCGATCTTGCAGGAACGAAGC
TCTGTAAGAGCGAAATCAAGGGTCTGGTAACACTGAAGCGAGACGCTGCT
GTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGAGCAGGAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000253:39566..40807+

>ATCC10864_011037-T1 ID=ATCC10864_011037-T1|Name=ATCC10864_011037-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1242bp|location=Sequence derived from alignment at MCQH01000253:39566..40807+ (Aspergillus niger ATCC 10864)
ATGCGCACTTCTCGAGCTTCTAAAGAGACTGCGAAGGTTCTGCAGGCTTT
GTCGCCTCCTGCTCGTCGACAAACTCGCAGTTCGGCTCAGGCTGCTAGTC
TCCTTCAGGGCTTTGCTTTTGGGGGTGGTACTGCCCCGGATGCATCTATC
AGTGATGATGATACTTCTTCGCTCTCGTCGGTGCCGACGGTTGATATCGA
GGATATCGTAGAGCTGCCGGCCAAGCGTCGCAAGAGTGCTTTGAGCAGTT
CTGTCACGAGGACGAGTGCGCGCTCTACTCGGAGGGCTGTCAAAGCAGAG
ACCCCTGTCAAAGAGGAAGCACCTGTCAAGGAAGAGCCGGTTGAGAAGCC
GCAAAAGGCACGACGGATGCCCGCGCGCAAGATCAAAATCGAGAATGGTG
GTTATTCCATGGAGCCGCCGTCTAACTGGGAGACTATGTATGACATGGTC
AAGAAGATGCGAGAGGCAAATCCCACTGCACCCGTTGACACCATGGGCTG
TGCCGAACTCTACTGGCGTGCATCCTCTCCGCGCGATCGCCGTTTCCAGA
CTCTCATCGCGCTAATGCTATCATCCCAGACCAAGGACACAGTCACGGCG
GTGGCCATGCAGCGGTTGCACACGGAGCTTGGAGACCAGTCGACAACCAT
TGTGAAGAAGGAGCCCGAAGATTATGACTGGAAGCCCACGGACCAGGTCA
AGGACAGCACTTTGAACCTGGAGAACATCCTAGCCGTCACCCCTGAGCGC
CTGAACGAACTTATTGCCAAGGTGGGCTTCCACAACAACAAGACCAAGTA
TATCAAGGCCGCGGCCATCATCCTCCGCGATCAATATGACTCCGATATCC
CGTCGACTGCTCCTGAACTGATGAAGCTCCCGGGCGTCGGTCCGAAGATG
GCGTTTCTCTGTATGAGCGCGGCGTGGGGCAAGCACGAAGGCATTGGCGT
TGATGTTCACGTTCACCGGATTACCAACCTCTGGGGCTGGCACAAGACGA
AGAATCCCGAGGAAACTCGCATGGCGCTGGAGTCGTGGCTACCAAAAGAC
AAGTGGCACGAGATCAACAAACTCTTGGTCGGCTTAGGACAGACGGTCTG
CTTACCTGTAGCCCGGAGATGCGGAGAATGCGATCTTGCAGGAACGAAGC
TCTGTAAGAGCGAAATCAAGGGTCTGGTAACACTGAAGCGAGACGCTGCT
GTGAAGCAGGAGGAGCCGAAGGTGAAGGTCGAGCAGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003677DNA binding
GO:0003824catalytic activity
GO:0019104DNA N-glycosylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
GO:0006285base-excision repair, AP site formation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTH1ATCC10864_011037Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011037-T1.exon1ATCC10864_011037-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011037-T1.cdsATCC10864_011037-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011037-T1ATCC10864_011037-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00633
InterProIPR004036
InterProIPR011257
InterProIPR000445
InterProIPR030841
InterProIPR023170
PFAMPF00730
InterProIPR003265
Properties
Property NameValue
NoteBUSCO:EOG09263R4M
Productalpha-trehalase nth1
Productalpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000253supercontigMCQH01000253:39566..40807 +
Powered by Drupal