You are here

Home

ATCC10864_011043-T1, ATCC10864_011043-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011043-T1
Unique NameATCC10864_011043-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000253:58425..58938+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011043-T1 ID=ATCC10864_011043-T1|Name=ATCC10864_011043-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=514bp|location=Sequence derived from alignment at MCQH01000253:58425..58938+ (Aspergillus niger ATCC 10864)
ATGGAATCGTAAGCAGTTCCCCTTTTCATACCTTTTTATCAAAAGTTCCC
CGGATGTGTACTGACCAGTCCCAGCCTCAACGCCTCTGAGCAGCGTGAGC
TCGCCTCTCGCATGGAGAGACGCCAGATGAAGGAATTCATGACCGTACGT
GAGACCCAAAATAAACAGTGATACCCTTTCGCACCGAATCCGGCTCCTGC
CTTGCACAATCTATCTACACTTTCAACAGTTCATCTGTCCTTCCGTCCAT
CCGCCCGTCCATCTGCCCATTCGTCCATTTATCATCCCTAGCTCGGCCTT
CCGGATTCTAATCTGATCATTGTAGATGTACTCCAAGCTCGTCCAGCGCT
GCTTCGATGACTGCGTCAACGACTTCACCACCAAGTCCCTGATCAACCGG
GAAGAGGGCTGTGTCCTGCGCTGCGTTGACAAGTTCATGAAGGGATCGGC
TCGCCTGAACGAGCGGTTCCAGGAACAGAACCAGGCCATGATGATGCAGG
GACAACAGCGGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000253:58425..58938+

>ATCC10864_011043-T1 ID=ATCC10864_011043-T1|Name=ATCC10864_011043-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=801bp|location=Sequence derived from alignment at MCQH01000253:58425..58938+ (Aspergillus niger ATCC 10864)
ATGGAATCCCTCAACGCCTCTGAGCAGCGTGAGCTCGCCTCTCGCATGGA
GAGACGCCAGATGAAGGAATTCATGACCATGTACTCCAAGCTCGTCCAGC
GCTGCTTCGATGACTGCGTCAACGACTTCACCACCAAGTCCCTGATCAAC
CGGGAAGAGGGCTGTGTCCTGCGCTGCGTTGACAAGTTCATGAAGGGATC
GGCTCGCCTGAACGAGCGGTTCCAGGAACAGAACCAGGCCATGATGATGC
AGGGACAACAGCGGTAAATGGAATCCCTCAACGCCTCTGAGCAGCGTGAG
CTCGCCTCTCGCATGGAGAGACGCCAGATGAAGGAATTCATGACCATGTA
CTCCAAGCTCGTCCAGCGCTGCTTCGATGACTGCGTCAACGACTTCACCA
CCAAGTCCCTGATCAACCGGGAAGAGGGCTGTGTCCTGCGCTGCGTTGAC
AAGTTCATGAAGGGATCGGCTCGCCTGAACGAGCGGTTCCAGGAACAGAA
CCAGGCCATGATGATGCAGGGACAACAGCGGTAAATGGAATCCCTCAACG
CCTCTGAGCAGCGTGAGCTCGCCTCTCGCATGGAGAGACGCCAGATGAAG
GAATTCATGACCATGTACTCCAAGCTCGTCCAGCGCTGCTTCGATGACTG
CGTCAACGACTTCACCACCAAGTCCCTGATCAACCGGGAAGAGGGCTGTG
TCCTGCGCTGCGTTGACAAGTTCATGAAGGGATCGGCTCGCCTGAACGAG
CGGTTCCAGGAACAGAACCAGGCCATGATGATGCAGGGACAACAGCGGTA
A
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM9ATCC10864_011043Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011043-T1.exon1ATCC10864_011043-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011043-T1.exon2ATCC10864_011043-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011043-T1.exon3ATCC10864_011043-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011043-T1.cdsATCC10864_011043-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011043-T1ATCC10864_011043-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035427
PFAMPF02953
InterProIPR004217
Properties
Property NameValue
NoteBUSCO:EOG09265L8N
Productprotein transporter tim9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000253supercontigMCQH01000253:58425..58938 +
Powered by Drupal