You are here

Home

ATCC10864_011062-T1, ATCC10864_011062-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011062-T1
Unique NameATCC10864_011062-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000253:115978..117262-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011062-T1 ID=ATCC10864_011062-T1|Name=ATCC10864_011062-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1285bp|location=Sequence derived from alignment at MCQH01000253:115978..117262- (Aspergillus niger ATCC 10864)
ATGAACGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGATTCCAT
CGACCCGAGTGTGCTCGCAGGTAAGCCGCGATGCCTCCGTGGGCAAGGCT
ACCACTGACAAATAGCGCCCAGAACTACCCAAGGGCAGCCGTGTCATATC
CACCGAGGAGCGTGGCATAAGCTTCTGGGGCACTACTGGCCGGATAAACG
TTGAATTGGCTGATGGGACACCCGTTTCATTCTTCATCAAGGCCGTGACG
AAGGAAAGGGGCAAGAACATGGTTTACGGGGAGTATGAGTCTATGAAAGC
CATATACAACGTTGCTCCGAACTTTGCCCCAAAGCCGATCGCGTGGGGGT
CCTACCAGGATTGCCCAGATACACACTTCTTCCTCTGCGAATATCGTGAT
ATGGCTGCTGACATGCCTGACCCGGATAAATTCGCTGCTCGGTTGGCTGC
TCTCCATAACAACAGCGCATCTCCGACGGGGAAATTCGGCTTTCATGTGA
CCACCCACAATGGCAACTTGCCGCAAATGACTGACTGGGAGGATAGTTGG
GAGATTTTCTTTGCTAAGAGCATGAGACACGCTCTTGATCTTGAGATTGC
AGTCAAAGGCTGGGATCCAGAATTGGATTTCTTAGTTCCAGCGTTGTTTG
ACAGGGTCATACCGCGCCTCCTCCGGCCACTTGAGAGCGAAGGACGATCA
GTGAAGCCTTCGCTGATCCATGGTGATCTGTGGTATGCCAATTCGGGCAT
CGACACGGAGACAGGAGAGTCGCTTGTGTTTGATGCATGCTGCTTCTACG
CCCACAACGAATGTGAGTTGGCAGGTTTTTATGGTGAAGGCAATCAAACT
GACCGATGGGACACCAATGAAGACGAGTTTGGACAATGGCGGCCGATTTG
TAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATGCTCAGG
TTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTACAAGTTG
TAAGAGCCTGACTGAGTGACGAGATGATACAGAAAACGCTGATGAGTAGT
AGACGGTTCAATACCCACGTATCCGCCCTGTTTGCAGATAATGCATCACT
AAGAGAGCAGTATGAAATCTATCCTGCATCTTCGCGCTCAGCCTTTAACT
GATCACTATTTTAGAATGCTCAACGACATCCGAGATTTGGTGGCCAGGTA
CGGGTCTGGAGTAGAATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTC
AGTCATGTGCTTTAAACGATTTTGAGAAAGAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000253:115978..117262-

>ATCC10864_011062-T1 ID=ATCC10864_011062-T1|Name=ATCC10864_011062-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4500bp|location=Sequence derived from alignment at MCQH01000253:115978..117262- (Aspergillus niger ATCC 10864)
AATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAG
AATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTA
AACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGT
TTGCAGATAATGCATCACTAAGAGAGCAAACTACCCAAGGGCAGCCGTGT
CATATCCACCGAGGAGCGTGGCATAAGCTTCTGGGGCACTACTGGCCGGA
TAAACGTTGAATTGGCTGATGGGACACCCGTTTCATTCTTCATCAAGGCC
GTGACGAAGGAAAGGGGCAAGAACATGGTTTACGGGGAGTATGAGTCTAT
GAAAGCCATATACAACGTTGCTCCGAACTTTGCCCCAAAGCCGATCGCGT
GGGGGTCCTACCAGGATTGCCCAGATACACACTTCTTCCTCTGCGAATAT
CGTGATATGGCTGCTGACATGCCTGACCCGGATAAATTCGCTGCTCGGTT
GGCTGCTCTCCATAACAACAGCGCATCTCCGACGGGGAAATTCGGCTTTC
ATGTGACCACCCACAATGGCAACTTGCCGCAAATGACTGACTGGGAGGAT
AGTTGGGAGATTTTCTTTGCTAAGAGCATGAGACACGCTCTTGATCTTGA
GATTGCAGTCAAAGGCTGGGATCCAGAATTGGATTTCTTAGTTCCAGCGT
TGTTTGACAGGGTCATACCGCGCCTCCTCCGGCCACTTGAGAGCGAAGGA
CGATCAGTGAAGCCTTCGCTGATCCATGGTGATCTGTGGTATGCCAATTC
GGGCATCGACACGGAGACAGGAGAGTCGCTTGTGTTTGATGCATGCTGCT
TCTACGCCCACAACGAATGTGAGTTGGCAGGTTTTTATGGTGAAGGCAAT
CAAACTGACCGATGGGACACCAATGAAGACGAGTTTGGACAATGGCGGCC
GATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATG
CTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTAC
AAGTTATGAACGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGAT
TCCATCGACCCGAGTGTGCTCGCAGAATGCTCAACGACATCCGAGATTTG
GTGGCCAGGTACGGGTCTGGAGTAGAATATGAGGCTTCAGAAGCGTCTGA
AGGGCGATCTCAGTCATGTGCTTTAAACGATTTTGAGAAAGAATAGACGG
TTCAATACCCACGTATCCGCCCTGTTTGCAGATAATGCATCACTAAGAGA
GCAAACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCATA
AGCTTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGGAC
ACCCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAACA
TGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTCCG
AACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCAGA
TACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCCTG
ACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCGCA
TCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAACTT
GCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAAGA
GCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATCCA
GAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGCCT
CCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGATCC
ATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAGAG
TCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATGTGAGTT
GGCAGGTTTTTATGGTGAAGGCAATCAAACTGACCGATGGGACACCAATG
AAGACGAGTTTGGACAATGGCGGCCGATTTGTAACCGATTCGGTGACGAA
TACCTGGAGGCCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGA
TTACGACGGGCGTTTGGATCTTTACAAGTTATGAACGACAGCGGTAGTCC
AGCTGTAGACTTCAGCAGAGAGGATTCCATCGACCCGAGTGTGCTCGCAG
AATGCTCAACGACATCCGAGATTTGGTGGCCAGGTACGGGTCTGGAGTAG
AATATGAGGCTTCAGAAGCGTCTGAAGGGCGATCTCAGTCATGTGCTTTA
AACGATTTTGAGAAAGAATAGACGGTTCAATACCCACGTATCCGCCCTGT
TTGCAGATAATGCATCACTAAGAGAGCAAACTACCCAAGGGCAGCCGTGT
CATATCCACCGAGGAGCGTGGCATAAGCTTCTGGGGCACTACTGGCCGGA
TAAACGTTGAATTGGCTGATGGGACACCCGTTTCATTCTTCATCAAGGCC
GTGACGAAGGAAAGGGGCAAGAACATGGTTTACGGGGAGTATGAGTCTAT
GAAAGCCATATACAACGTTGCTCCGAACTTTGCCCCAAAGCCGATCGCGT
GGGGGTCCTACCAGGATTGCCCAGATACACACTTCTTCCTCTGCGAATAT
CGTGATATGGCTGCTGACATGCCTGACCCGGATAAATTCGCTGCTCGGTT
GGCTGCTCTCCATAACAACAGCGCATCTCCGACGGGGAAATTCGGCTTTC
ATGTGACCACCCACAATGGCAACTTGCCGCAAATGACTGACTGGGAGGAT
AGTTGGGAGATTTTCTTTGCTAAGAGCATGAGACACGCTCTTGATCTTGA
GATTGCAGTCAAAGGCTGGGATCCAGAATTGGATTTCTTAGTTCCAGCGT
TGTTTGACAGGGTCATACCGCGCCTCCTCCGGCCACTTGAGAGCGAAGGA
CGATCAGTGAAGCCTTCGCTGATCCATGGTGATCTGTGGTATGCCAATTC
GGGCATCGACACGGAGACAGGAGAGTCGCTTGTGTTTGATGCATGCTGCT
TCTACGCCCACAACGAATGTGAGTTGGCAGGTTTTTATGGTGAAGGCAAT
CAAACTGACCGATGGGACACCAATGAAGACGAGTTTGGACAATGGCGGCC
GATTTGTAACCGATTCGGTGACGAATACCTGGAGGCCTATCGCTCCTATG
CTCAGGTTTCGCCGCCGGAGGAGGATTACGACGGGCGTTTGGATCTTTAC
AAGTTATGAACGACAGCGGTAGTCCAGCTGTAGACTTCAGCAGAGAGGAT
TCCATCGACCCGAGTGTGCTCGCAGAATGCTCAACGACATCCGAGATTTG
GTGGCCAGGTACGGGTCTGGAGTAGAATATGAGGCTTCAGAAGCGTCTGA
AGGGCGATCTCAGTCATGTGCTTTAAACGATTTTGAGAAAGAATAGACGG
TTCAATACCCACGTATCCGCCCTGTTTGCAGATAATGCATCACTAAGAGA
GCAAACTACCCAAGGGCAGCCGTGTCATATCCACCGAGGAGCGTGGCATA
AGCTTCTGGGGCACTACTGGCCGGATAAACGTTGAATTGGCTGATGGGAC
ACCCGTTTCATTCTTCATCAAGGCCGTGACGAAGGAAAGGGGCAAGAACA
TGGTTTACGGGGAGTATGAGTCTATGAAAGCCATATACAACGTTGCTCCG
AACTTTGCCCCAAAGCCGATCGCGTGGGGGTCCTACCAGGATTGCCCAGA
TACACACTTCTTCCTCTGCGAATATCGTGATATGGCTGCTGACATGCCTG
ACCCGGATAAATTCGCTGCTCGGTTGGCTGCTCTCCATAACAACAGCGCA
TCTCCGACGGGGAAATTCGGCTTTCATGTGACCACCCACAATGGCAACTT
GCCGCAAATGACTGACTGGGAGGATAGTTGGGAGATTTTCTTTGCTAAGA
GCATGAGACACGCTCTTGATCTTGAGATTGCAGTCAAAGGCTGGGATCCA
GAATTGGATTTCTTAGTTCCAGCGTTGTTTGACAGGGTCATACCGCGCCT
CCTCCGGCCACTTGAGAGCGAAGGACGATCAGTGAAGCCTTCGCTGATCC
ATGGTGATCTGTGGTATGCCAATTCGGGCATCGACACGGAGACAGGAGAG
TCGCTTGTGTTTGATGCATGCTGCTTCTACGCCCACAACGAATGTGAGTT
GGCAGGTTTTTATGGTGAAGGCAATCAAACTGACCGATGGGACACCAATG
AAGACGAGTTTGGACAATGGCGGCCGATTTGTAACCGATTCGGTGACGAA
TACCTGGAGGCCTATCGCTCCTATGCTCAGGTTTCGCCGCCGGAGGAGGA
TTACGACGGGCGTTTGGATCTTTACAAGTTATGAACGACAGCGGTAGTCC
AGCTGTAGACTTCAGCAGAGAGGATTCCATCGACCCGAGTGTGCTCGCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011062ATCC10864_011062Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011062-T1ATCC10864_011062-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011062-T1.cdsATCC10864_011062-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011062-T1.exon4ATCC10864_011062-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011062-T1.exon3ATCC10864_011062-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011062-T1.exon2ATCC10864_011062-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011062-T1.exon1ATCC10864_011062-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011009
PFAMPF03881
InterProIPR016477
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000253supercontigMCQH01000253:115978..117262 -
Powered by Drupal