You are here

Home

ATCC10864_011085-T1, ATCC10864_011085-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011085-T1
Unique NameATCC10864_011085-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:3311..4485-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011085-T1 ID=ATCC10864_011085-T1|Name=ATCC10864_011085-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1175bp|location=Sequence derived from alignment at MCQH01000255:3311..4485- (Aspergillus niger ATCC 10864)
ATGTCTTCTTCTCTCGAGCAGCTCAAGGCCACCGGCACTGTAAGTCATTC
ATAGCTCTCCGACACCGCCGTACCATCTTCAAAAGCATCGCTAATCATTC
ATCTTCTCATCAATTCAGGTCGTCGTCTGCGACTCCGGTGACTTCGCCAC
CATTGGCAAGTACAAGCCTCAGGATGCTACCACCAACCCCTCCCTGATCC
TCGCCGCCTCCAAGAAGCCCGAGTACGCCAGCCTCATCGATGCCGCTGTT
GCCAAGGGTAAGGCTGAGGGCAAGACTCTCGACGAGCAGGTCGATGCCAC
CCTCGACCGTCTGCTTGTTGAGTTCGGCAAGAAGATCCTCGAGATCATCC
CCGGCAAGGTCTCCACTGAGGTCGATGCCCGCTTCTCTTTCGACACCCAG
GCCTCCATTGACAAGGCCCTCCACATCATCAAGGTATGTCGAAATTCGTT
CTTCCTCGTCCTCTTCTGGTTCTAGTGGCTAACAAATTGCTCCTCATAGC
TCTACGAGGAGAACGGCATCTCCCGCGACCGCATTCTCATCAAGATCGCC
TCCACCTGGGAGGGTATCAAGGCCGCTCAGGTCCTCCAGTCCCAGCACGG
CATCAACTGCAACCTGACCCTCATGTTCTCCACCGTTCAGGCCATCGCTG
CCGCTGAGGCCGGTGCCTACCTCATCTCTCCCTTCGTCGGCCGTATCCTC
GACTGGTACAAGGCCGCTCACAAGCGTGACTACACCGCTGAGGAGGACCC
CGGTGTCAAGTCCGTCCAGAACATCTTCAACTACTACAAGAAGCACGGCT
ACAAGACCATTGTCATGGGTGCCTCTTTCCGTAACACCGGTGAGATCACC
GAGCTGGCTGGCTGTGACTACCTGACCATCTCCGTAAGTTCCTCTCTCAT
TTGCCACATTCTATATTTCAATATTAATCAAGAAATAGCCCAACCTCCTC
GAGGACCTCTACAACTCCACCGCTGCCGTCCCCCAGAAGCTCGACGCCGC
CAACGCCGCCGGCCTCGACATCCCCAAGAAGACCTACATCAACGACGAGG
CTCTCTTCCGCTTCGACTTCAACGAGGAGGCCATGGCAGTTGAGAAGCTC
CGTGAGGGTATCTCCAAGTTCGCCGCTGACGCCGTCACCCTCAAGGACAT
CCTGAAGCAGAAGATCCAGGCATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000255:3311..4485-

>ATCC10864_011085-T1 ID=ATCC10864_011085-T1|Name=ATCC10864_011085-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3900bp|location=Sequence derived from alignment at MCQH01000255:3311..4485- (Aspergillus niger ATCC 10864)
CCCAACCTCCTCGAGGACCTCTACAACTCCACCGCTGCCGTCCCCCAGAA
GCTCGACGCCGCCAACGCCGCCGGCCTCGACATCCCCAAGAAGACCTACA
TCAACGACGAGGCTCTCTTCCGCTTCGACTTCAACGAGGAGGCCATGGCA
GTTGAGAAGCTCCGTGAGGGTATCTCCAAGTTCGCCGCTGACGCCGTCAC
CCTCAAGGACATCCTGAAGCAGAAGATCCAGGCATAGCTCTACGAGGAGA
ACGGCATCTCCCGCGACCGCATTCTCATCAAGATCGCCTCCACCTGGGAG
GGTATCAAGGCCGCTCAGGTCCTCCAGTCCCAGCACGGCATCAACTGCAA
CCTGACCCTCATGTTCTCCACCGTTCAGGCCATCGCTGCCGCTGAGGCCG
GTGCCTACCTCATCTCTCCCTTCGTCGGCCGTATCCTCGACTGGTACAAG
GCCGCTCACAAGCGTGACTACACCGCTGAGGAGGACCCCGGTGTCAAGTC
CGTCCAGAACATCTTCAACTACTACAAGAAGCACGGCTACAAGACCATTG
TCATGGGTGCCTCTTTCCGTAACACCGGTGAGATCACCGAGCTGGCTGGC
TGTGACTACCTGACCATCTCCGTCGTCGTCTGCGACTCCGGTGACTTCGC
CACCATTGGCAAGTACAAGCCTCAGGATGCTACCACCAACCCCTCCCTGA
TCCTCGCCGCCTCCAAGAAGCCCGAGTACGCCAGCCTCATCGATGCCGCT
GTTGCCAAGGGTAAGGCTGAGGGCAAGACTCTCGACGAGCAGGTCGATGC
CACCCTCGACCGTCTGCTTGTTGAGTTCGGCAAGAAGATCCTCGAGATCA
TCCCCGGCAAGGTCTCCACTGAGGTCGATGCCCGCTTCTCTTTCGACACC
CAGGCCTCCATTGACAAGGCCCTCCACATCATCAAGATGTCTTCTTCTCT
CGAGCAGCTCAAGGCCACCGGCACTCCCAACCTCCTCGAGGACCTCTACA
ACTCCACCGCTGCCGTCCCCCAGAAGCTCGACGCCGCCAACGCCGCCGGC
CTCGACATCCCCAAGAAGACCTACATCAACGACGAGGCTCTCTTCCGCTT
CGACTTCAACGAGGAGGCCATGGCAGTTGAGAAGCTCCGTGAGGGTATCT
CCAAGTTCGCCGCTGACGCCGTCACCCTCAAGGACATCCTGAAGCAGAAG
ATCCAGGCATAGCTCTACGAGGAGAACGGCATCTCCCGCGACCGCATTCT
CATCAAGATCGCCTCCACCTGGGAGGGTATCAAGGCCGCTCAGGTCCTCC
AGTCCCAGCACGGCATCAACTGCAACCTGACCCTCATGTTCTCCACCGTT
CAGGCCATCGCTGCCGCTGAGGCCGGTGCCTACCTCATCTCTCCCTTCGT
CGGCCGTATCCTCGACTGGTACAAGGCCGCTCACAAGCGTGACTACACCG
CTGAGGAGGACCCCGGTGTCAAGTCCGTCCAGAACATCTTCAACTACTAC
AAGAAGCACGGCTACAAGACCATTGTCATGGGTGCCTCTTTCCGTAACAC
CGGTGAGATCACCGAGCTGGCTGGCTGTGACTACCTGACCATCTCCGTCG
TCGTCTGCGACTCCGGTGACTTCGCCACCATTGGCAAGTACAAGCCTCAG
GATGCTACCACCAACCCCTCCCTGATCCTCGCCGCCTCCAAGAAGCCCGA
GTACGCCAGCCTCATCGATGCCGCTGTTGCCAAGGGTAAGGCTGAGGGCA
AGACTCTCGACGAGCAGGTCGATGCCACCCTCGACCGTCTGCTTGTTGAG
TTCGGCAAGAAGATCCTCGAGATCATCCCCGGCAAGGTCTCCACTGAGGT
CGATGCCCGCTTCTCTTTCGACACCCAGGCCTCCATTGACAAGGCCCTCC
ACATCATCAAGATGTCTTCTTCTCTCGAGCAGCTCAAGGCCACCGGCACT
CCCAACCTCCTCGAGGACCTCTACAACTCCACCGCTGCCGTCCCCCAGAA
GCTCGACGCCGCCAACGCCGCCGGCCTCGACATCCCCAAGAAGACCTACA
TCAACGACGAGGCTCTCTTCCGCTTCGACTTCAACGAGGAGGCCATGGCA
GTTGAGAAGCTCCGTGAGGGTATCTCCAAGTTCGCCGCTGACGCCGTCAC
CCTCAAGGACATCCTGAAGCAGAAGATCCAGGCATAGCTCTACGAGGAGA
ACGGCATCTCCCGCGACCGCATTCTCATCAAGATCGCCTCCACCTGGGAG
GGTATCAAGGCCGCTCAGGTCCTCCAGTCCCAGCACGGCATCAACTGCAA
CCTGACCCTCATGTTCTCCACCGTTCAGGCCATCGCTGCCGCTGAGGCCG
GTGCCTACCTCATCTCTCCCTTCGTCGGCCGTATCCTCGACTGGTACAAG
GCCGCTCACAAGCGTGACTACACCGCTGAGGAGGACCCCGGTGTCAAGTC
CGTCCAGAACATCTTCAACTACTACAAGAAGCACGGCTACAAGACCATTG
TCATGGGTGCCTCTTTCCGTAACACCGGTGAGATCACCGAGCTGGCTGGC
TGTGACTACCTGACCATCTCCGTCGTCGTCTGCGACTCCGGTGACTTCGC
CACCATTGGCAAGTACAAGCCTCAGGATGCTACCACCAACCCCTCCCTGA
TCCTCGCCGCCTCCAAGAAGCCCGAGTACGCCAGCCTCATCGATGCCGCT
GTTGCCAAGGGTAAGGCTGAGGGCAAGACTCTCGACGAGCAGGTCGATGC
CACCCTCGACCGTCTGCTTGTTGAGTTCGGCAAGAAGATCCTCGAGATCA
TCCCCGGCAAGGTCTCCACTGAGGTCGATGCCCGCTTCTCTTTCGACACC
CAGGCCTCCATTGACAAGGCCCTCCACATCATCAAGATGTCTTCTTCTCT
CGAGCAGCTCAAGGCCACCGGCACTCCCAACCTCCTCGAGGACCTCTACA
ACTCCACCGCTGCCGTCCCCCAGAAGCTCGACGCCGCCAACGCCGCCGGC
CTCGACATCCCCAAGAAGACCTACATCAACGACGAGGCTCTCTTCCGCTT
CGACTTCAACGAGGAGGCCATGGCAGTTGAGAAGCTCCGTGAGGGTATCT
CCAAGTTCGCCGCTGACGCCGTCACCCTCAAGGACATCCTGAAGCAGAAG
ATCCAGGCATAGCTCTACGAGGAGAACGGCATCTCCCGCGACCGCATTCT
CATCAAGATCGCCTCCACCTGGGAGGGTATCAAGGCCGCTCAGGTCCTCC
AGTCCCAGCACGGCATCAACTGCAACCTGACCCTCATGTTCTCCACCGTT
CAGGCCATCGCTGCCGCTGAGGCCGGTGCCTACCTCATCTCTCCCTTCGT
CGGCCGTATCCTCGACTGGTACAAGGCCGCTCACAAGCGTGACTACACCG
CTGAGGAGGACCCCGGTGTCAAGTCCGTCCAGAACATCTTCAACTACTAC
AAGAAGCACGGCTACAAGACCATTGTCATGGGTGCCTCTTTCCGTAACAC
CGGTGAGATCACCGAGCTGGCTGGCTGTGACTACCTGACCATCTCCGTCG
TCGTCTGCGACTCCGGTGACTTCGCCACCATTGGCAAGTACAAGCCTCAG
GATGCTACCACCAACCCCTCCCTGATCCTCGCCGCCTCCAAGAAGCCCGA
GTACGCCAGCCTCATCGATGCCGCTGTTGCCAAGGGTAAGGCTGAGGGCA
AGACTCTCGACGAGCAGGTCGATGCCACCCTCGACCGTCTGCTTGTTGAG
TTCGGCAAGAAGATCCTCGAGATCATCCCCGGCAAGGTCTCCACTGAGGT
CGATGCCCGCTTCTCTTTCGACACCCAGGCCTCCATTGACAAGGCCCTCC
ACATCATCAAGATGTCTTCTTCTCTCGAGCAGCTCAAGGCCACCGGCACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006098pentose-phosphate shunt
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004801sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011085ATCC10864_011085Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011085-T1ATCC10864_011085-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011085-T1.cdsATCC10864_011085-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011085-T1.exon4ATCC10864_011085-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011085-T1.exon3ATCC10864_011085-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011085-T1.exon2ATCC10864_011085-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011085-T1.exon1ATCC10864_011085-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018225
PFAMPF00923
InterProIPR001585
InterProIPR004730
InterProIPR013785
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:3311..4485 -
Powered by Drupal