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ATCC10864_011104-T1, ATCC10864_011104-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011104-T1
Unique NameATCC10864_011104-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:71405..73417-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011104-T1 ID=ATCC10864_011104-T1|Name=ATCC10864_011104-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2013bp|location=Sequence derived from alignment at MCQH01000255:71405..73417- (Aspergillus niger ATCC 10864)
ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGA
TTCCTTGAAGACCGAATCACGCTACACCTACCGTCACCTACAGCTTCTCC
GTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC
GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCAC
GGTGCCCTTAGCTGTACGACAATGGGACTCGCTCATTGCGATCAACTATC
CGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG
AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGG
AGAAGGTGGGAAATGGGCATACAGAAACGATGCGTTCAAGCGGATGAATA
CCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG
AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGG
TGAACACGGAGCTGGTGCGCAATCTCCCATACAGCACGCTGGTCTTGAGA
AAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT
GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGA
TCGAGTCACTCCGCTTCCTGTCCCACCTACGACTGCGTTGGAGTGGAACT
CGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT
CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTC
GGTCAGGGCAGCTGTTTGGGATCGGCTCCAATACACTTGCTCTGCGGGTG
TTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG
AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGG
CTACAAATTTACAAAGATTAGGATGCTTGGGGGTAAACTTGGTGACCAGG
TTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG
CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTA
TGGAATCATCCGGGGAGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAA
TCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT
GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCG
CCTTGTTGAGGATGGCGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTG
CCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT
CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAAC
ACTCTTCCGACAGGTGATGACAGATGGACGCGCATGGCCGTGTGCCAATC
TTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA
ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAA
AAGGGATCTGGTGGCTGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGA
AACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG
CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATAT
GGAAACTGAAATTGATGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGC
TCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC
TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCA
CTTTGCCAAAGACCTGGCAGATGAAGAACGACAGGCATCCAGCGGCCCTC
AACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT
AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCT
TAGATTTGGATAA
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Coding sequence (CDS) from alignment at MCQH01000255:71405..73417-

>ATCC10864_011104-T1 ID=ATCC10864_011104-T1|Name=ATCC10864_011104-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2013bp|location=Sequence derived from alignment at MCQH01000255:71405..73417- (Aspergillus niger ATCC 10864)
ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGA
TTCCTTGAAGACCGAATCACGCTACACCTACCGTCACCTACAGCTTCTCC
GTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC
GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCAC
GGTGCCCTTAGCTGTACGACAATGGGACTCGCTCATTGCGATCAACTATC
CGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG
AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGG
AGAAGGTGGGAAATGGGCATACAGAAACGATGCGTTCAAGCGGATGAATA
CCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG
AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGG
TGAACACGGAGCTGGTGCGCAATCTCCCATACAGCACGCTGGTCTTGAGA
AAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT
GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGA
TCGAGTCACTCCGCTTCCTGTCCCACCTACGACTGCGTTGGAGTGGAACT
CGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT
CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTC
GGTCAGGGCAGCTGTTTGGGATCGGCTCCAATACACTTGCTCTGCGGGTG
TTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG
AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGG
CTACAAATTTACAAAGATTAGGATGCTTGGGGGTAAACTTGGTGACCAGG
TTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG
CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTA
TGGAATCATCCGGGGAGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAA
TCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT
GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCG
CCTTGTTGAGGATGGCGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTG
CCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT
CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAAC
ACTCTTCCGACAGGTGATGACAGATGGACGCGCATGGCCGTGTGCCAATC
TTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA
ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAA
AAGGGATCTGGTGGCTGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGA
AACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG
CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATAT
GGAAACTGAAATTGATGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGC
TCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC
TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCA
CTTTGCCAAAGACCTGGCAGATGAAGAACGACAGGCATCCAGCGGCCCTC
AACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT
AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCT
TAGATTTGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011104ATCC10864_011104Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011104-T1.cdsATCC10864_011104-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011104-T1.exon1ATCC10864_011104-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011104-T1ATCC10864_011104-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF18439
InterProIPR043502
InterProIPR001126
InterProIPR043128
PFAMPF11799
InterProIPR041298
InterProIPR017961
InterProIPR036775
PFAMPF00817
Properties
Property NameValue
NoteBUSCO:EOG09261801
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:71405..73417 -
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