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ATCC10864_011113-T1, ATCC10864_011113-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011113-T1
Unique NameATCC10864_011113-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:95740..97365-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011113-T1 ID=ATCC10864_011113-T1|Name=ATCC10864_011113-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1626bp|location=Sequence derived from alignment at MCQH01000255:95740..97365- (Aspergillus niger ATCC 10864)
ATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGT
CCCAGCCCAGGTAATGCAATCCTTCATCTCCTAGGAGTCTGTCTGATTGC
CTGATCAAACAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGT
CTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACT
GCACCGATAGAGAGGGTATGTTCTAATCAAAATACACCATCCTGTCTTTT
CAAGTACTGAGAATTCCAACTAACCAACCGTTCAGATGTTTGCTCTCTAG
CACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAAC
TCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAA
GTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAA
GCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCT
CTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGA
CGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTC
GTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCG
CTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTA
CGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCC
ATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGAC
CTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGA
CCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCA
AGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCG
AACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGAC
CTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTC
TGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCC
TCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAG
CTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCA
TGTTTAGTGTAAGTCACACCCATGTCCCCAAATTGAACTATATATCCATC
AGTTCTAACGCATATTGTGGATAAAGTACGGCAGCGGTCTAGCCAGCACT
CTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGAAAAT
CGATCTCATGAACCGCCTGTATCAGAGACATATCGCTACGCCCGAGGAAT
ATGAAGAGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTGGTGA
TCAAGTTGTTGCTCTATACTGATACAGTGTATATCAAGGCCTGTACACTC
CGACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACATAGC
CTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGTATC
GGCGGACTTATGCTATCAAATCTTGA
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Coding sequence (CDS) from alignment at MCQH01000255:95740..97365-

>ATCC10864_011113-T1 ID=ATCC10864_011113-T1|Name=ATCC10864_011113-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6780bp|location=Sequence derived from alignment at MCQH01000255:95740..97365- (Aspergillus niger ATCC 10864)
GCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATACTCCATC
TGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTG
ATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGCAGCGGT
CTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCAT
GGTTGAGAAAATCGATCTCATGAACCGCCTGTATCAGAGACATATCGCTA
CGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAGCCGTGT
CCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCGTCTC
GAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGTCCGT
TCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGTATTG
ACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGCTATA
AACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCGTAGC
ATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTG
CAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGAC
CATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTACAAACC
AGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATCACTT
GCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCGCAGA
AGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACTACAT
GGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGTCGAC
TCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACACAGAT
CTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAATCCCT
CAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGATCAGT
TCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGGAAAT
ATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTAATAT
CGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTGTCTGG
ATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAGTACACC
ATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGAGGATGG
CATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGTCCCA
GCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATAC
TCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGA
AAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGC
AGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAA
CCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGTATCAGAGACATA
TCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAG
CCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGT
CGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAA
GTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAG
GTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAAC
GCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGT
CGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCG
GTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCC
CTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTA
CAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAA
TCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGT
CGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGA
CTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACG
GTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGAC
ACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGA
ATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAG
ATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGT
GGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAG
TAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTT
GTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAG
TACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGA
GGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTAT
GTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGA
CTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACT
TGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGA
TACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGA
CCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGTATCAGA
GACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCAC
TAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCC
ATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTC
CATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCA
TTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTC
TTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGC
CATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTC
CTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTC
CTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGA
CTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATG
AATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTC
CTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCT
CTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGT
CGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAAC
CCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTA
CGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGA
CAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCT
TTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTT
GATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGT
TTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCC
GGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGA
TAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAG
ATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAG
CAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACAT
ACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAA
TCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAAC
CGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGT
ATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTC
TAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCC
AACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGC
CAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACA
CAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAAT
GCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCG
AGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCA
GTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAAC
GCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACAC
GTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATG
GCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAG
GACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCT
CGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCA
GCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGC
TCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCT
GACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAG
CTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCG
CCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCAT
CAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTG
GCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTC
TCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTG
CACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCC
ATGGAGATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTA
CGGAAGCAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGG
GAACATACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCT
ATCAAATCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAA
AGTAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACC
GCCTGTATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTT
GCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATT
GACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGA
CAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCG
GCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGA
ACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGA
CGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGT
CTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGC
CCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGAC
ACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCG
TCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGC
CACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAA
TGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGC
TAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAG
TCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCG
CACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCC
TTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATC
GCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTC
ACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAA
CTATTGGCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAA
GGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAA
TTACTGCACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATT
AAGGCCATGGAGATCTATGTCCCAGCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006084acetyl-CoA metabolic process
GO:0008299isoprenoid biosynthetic process
GO:0010142farnesyl diphosphate biosynthetic process, mevalonate pathway
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0004421hydroxymethylglutaryl-CoA synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011113ATCC10864_011113Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011113-T1ATCC10864_011113-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011113-T1.cdsATCC10864_011113-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011113-T1.exon5ATCC10864_011113-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011113-T1.exon4ATCC10864_011113-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011113-T1.exon3ATCC10864_011113-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011113-T1.exon2ATCC10864_011113-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011113-T1.exon1ATCC10864_011113-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013746
InterProIPR013528
PFAMPF08540
InterProIPR016039
PFAMPF01154
InterProIPR010122
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:95740..97365 -
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