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ATCC10864_011114-T1, ATCC10864_011114-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011114-T1
Unique NameATCC10864_011114-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:98528..100321-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011114-T1 ID=ATCC10864_011114-T1|Name=ATCC10864_011114-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1794bp|location=Sequence derived from alignment at MCQH01000255:98528..100321- (Aspergillus niger ATCC 10864)
ATGCGTGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGC
CCTTCCCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTT
TCCTCGCATTCTCGAGATATGTTGCCAGCTATACCCATCCTCACCATGCA
TCCGCCATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTT
CAAGGAGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTC
TACATAGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCAC
ATCGCAAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGA
TCCAGGCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCT
ACTCTGACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTT
GAAGGCGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGG
CACATACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTG
CTCAAGAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCA
AACCTTCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCG
CATTTTCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATAT
CCGTCGTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATG
AGCGATGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGG
ACCTCCTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACC
TTGGTGGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTT
GCTGTGGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAA
CCTCAACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACG
CCATCAGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGC
ACCAACCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGT
CGATGGCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTG
TCACTGGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAAC
AATGGTATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGA
GCTCTGCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTG
GCTTCATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGC
GCGAAGCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGT
CGTATTTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGGTAAGTCC
TCGGTCAGACATTATTCTTCTTCCTATCCTGTACTCACTACGTTTGCAGC
GGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGAT
CGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGC
GGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCG
GTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCA
GACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGG
TAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGA
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Coding sequence (CDS) from alignment at MCQH01000255:98528..100321-

>ATCC10864_011114-T1 ID=ATCC10864_011114-T1|Name=ATCC10864_011114-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3474bp|location=Sequence derived from alignment at MCQH01000255:98528..100321- (Aspergillus niger ATCC 10864)
CGGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGA
TCGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGG
CGGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGC
GGTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGC
AGACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGG
GTAGATGCTGATGTGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCG
TGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTC
CCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTC
GCATTCTCGAGATATGTTGCCAGCTATACCCATCCTCACCATGCATCCGC
CATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGG
AGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACAT
AGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGC
AAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAG
GCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCT
GACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGG
CGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACAT
ACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAA
GAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCT
TCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTT
TCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTC
GTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGA
TGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTC
CTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGT
GGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGT
GGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCA
ACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATC
AGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAA
CCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATG
GCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTGTCACT
GGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGG
TATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCT
GCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTC
ATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAA
GCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTAT
TTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGCGGTCGCGCTTAC
TCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGATCGGTGTCATGGG
CTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGCGGACAGCGGACC
CCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCGGTCTTTTCCTCG
GCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCAGACGAGACGGTT
CCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGGTAGATGCTGATG
TGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCGTGCTCCGTCTCCG
CTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTCCCTCCCGCTGTCT
ACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTCGCATTCTCGAGAT
ATGTTGCCAGCTATACCCATCCTCACCATGCATCCGCCATATCGGCTCTT
CCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGGAGAACGCCCAGCA
AATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACATAGCACAATTTCCC
AAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGCAAGAGGGAAAATG
CTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAGGCACCTCGTTCCT
AGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCTGACGACGTCCCAG
CAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGGCGTCACCTGTATG
ATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACATACTACCCCATCAC
CGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAAGAAAACAAGCTTC
CCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCTTCCCCACCAAGCA
GATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTTTCTTCAACCAAGC
CCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTCGTCATGGGCCCCT
GCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGATGAGACGATCATT
GTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTCCTCTTGTCAAAGC
TGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGGGGTCAGCTTC
ATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGTGGACGATGCGCAT
GCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCAACTATCCAAAAAC
GACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATCAGAGAGCCGTTGT
ATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAACCTCCGGCGCCAG
ATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATGGCAGTGAGTTTGC
CGAATTCAAGCGGGACTATGGCACGACACTTGTCACTGGCTTTGCTCGTA
TCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGGTATCCTGTTCTCC
GAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCTGCGCGCAACGTAA
AATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTCATGGTTGGCGCAG
ATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCTCGTTACGGCC
GTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTATTTGGTTCCAGCGC
TGGCGCGGGCAACTATGGAATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MCCC2ATCC10864_011114Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011114-T1ATCC10864_011114-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011114-T1.cdsATCC10864_011114-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011114-T1.exon2ATCC10864_011114-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011114-T1.exon1ATCC10864_011114-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029045
InterProIPR011762
InterProIPR034733
InterProIPR011763
PFAMPF01039
Properties
Property NameValue
Product mitochondrial
ProductMethylcrotonoyl-CoA carboxylase beta chain
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:98528..100321 -
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