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ATCC10864_011124-T1, ATCC10864_011124-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011124-T1
Unique NameATCC10864_011124-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:126337..127916-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011124-T1 ID=ATCC10864_011124-T1|Name=ATCC10864_011124-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1580bp|location=Sequence derived from alignment at MCQH01000255:126337..127916- (Aspergillus niger ATCC 10864)
ATGCAGGGCCAAGCACTTCGTTATGCCCAGATCTTCTTAGTCGCTTGCCC
CTCCTTTATCCTTTTCGGTTACAATCAGTCCGGTGTCGGAGGACTCGATG
ACTTTCCCTCCTGGGTGAGAGTTTTTCCAGAAATTGACACAGTCAACACT
ACTGGAGCTCAGGAGTCTCACAATGCCACCGTTCAAGGAGCTGTGGTTGC
GTCATACACTATCGGAGCCCTCTTCGGGTCTCTGATTTGTACAATGATCG
GTGACATGCTTGGACGTCGCCGATCGATCTTTTCTGGAGCACTCATTGCA
TTGATTGGCCAAATCCTGGAATGCACCGCCTACTCTCTAGCTCAATTCGT
TGTTGGGAGAGTGATTCTGGGTTTCGGTGTTGGCATGCTCAGTGCGACTG
TTCCTGTCTGGCAATCCGAGTGCGCGCCTGCTGCTCAGCGAGGACGGAAC
GTGGTGTTGACAGGCATGTTCATCGCCTTTGGTTTCGCTTTGACACAATG
GGTGAACTTCGGTTTCTACCACATGGAGAACTCGCCTGCCTCGTGGAGGG
CATCACTTGCCATCCCGGCCTTGTTTTCATTCATAATCATGGGCAGCATT
TTCTTCCTCCCAGAGTCGCCGCGTTGGCTCGTCATGAAGAACAAATCAGA
CGTGGCACAGTTTACTTTGGCATCTCTGAGGGGCAAAGAGGTAGACTCGC
TGGAGGTTGTGGCGGAGCTAAGAGCCTACGAGCTTTCTCTGGAGGAATCC
TCGAACAACTCACTTAGGCTCCGAGACATCTTCAGTATGGGAGAGGAGAA
GCTCCTATACAGGTTCATCCTATGTGTCACCCTCCAATTCTTCCAGCAGA
TGACTGGTGGAACTCTGATCTCGGTCTACATTCCTCTTATCTTTCAAACA
GATCTTGGACTCGGTGCCAGTCTGTCGAAAATCTTGGCAGCATGCGCATT
GACTTGGAAGTTCCTGTGCTGCTTTGTGGGATTTGCCATCATTGACCGCA
TGGGACGACGCACAGCATTTATGGTCAGTGGCGGTGGTATGGGCATGTGC
ATGTTGGCATTGGCGGTCTCCAATTCCTTCTCCAATAACCATACCGCATC
TATTATTTCCGCCCTTTTCATTTTCATTTACAACTTCTTCCTTCCGATCG
GCTTCTTGGGAGCCAACTTCCTTTACCCAGCCGAGGTGGCGCCTGCCCGT
CTTCGTGTCGCTATGCAAGCGATCTCAATTGCCAACCAATGGCTATGGTA
CGACAGCCTCTATAATTTCCTCTTAGCTGACTTACGCTAATTCTTTTCTC
TTTTAGGATGTTTGTCGTCGCTATGATCACTCCCGTCGCTATCGACAACA
TCGGCTATCGCTACTACATTGTTTACGCCATCATCGGTGGCATCATCCCT
CCCATCATCTATCTGTTCTACCCAGAAACCAAGGGCCGGTCCCTAGAAGA
AGTTGACGAGATCTTCCGTGACGCTCCCACAATCTTCGCTGCGGTGTCGA
TGTCGAAGCATAAGCCGATGGGAGATAGGGCCATGGAGCGTGTCATGGAA
GAGAAGGCAACTGTGGAGGAAATAGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000255:126337..127916-

>ATCC10864_011124-T1 ID=ATCC10864_011124-T1|Name=ATCC10864_011124-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3042bp|location=Sequence derived from alignment at MCQH01000255:126337..127916- (Aspergillus niger ATCC 10864)
GATGTTTGTCGTCGCTATGATCACTCCCGTCGCTATCGACAACATCGGCT
ATCGCTACTACATTGTTTACGCCATCATCGGTGGCATCATCCCTCCCATC
ATCTATCTGTTCTACCCAGAAACCAAGGGCCGGTCCCTAGAAGAAGTTGA
CGAGATCTTCCGTGACGCTCCCACAATCTTCGCTGCGGTGTCGATGTCGA
AGCATAAGCCGATGGGAGATAGGGCCATGGAGCGTGTCATGGAAGAGAAG
GCAACTGTGGAGGAAATAGAGTAAATGCAGGGCCAAGCACTTCGTTATGC
CCAGATCTTCTTAGTCGCTTGCCCCTCCTTTATCCTTTTCGGTTACAATC
AGTCCGGTGTCGGAGGACTCGATGACTTTCCCTCCTGGGTGAGAGTTTTT
CCAGAAATTGACACAGTCAACACTACTGGAGCTCAGGAGTCTCACAATGC
CACCGTTCAAGGAGCTGTGGTTGCGTCATACACTATCGGAGCCCTCTTCG
GGTCTCTGATTTGTACAATGATCGGTGACATGCTTGGACGTCGCCGATCG
ATCTTTTCTGGAGCACTCATTGCATTGATTGGCCAAATCCTGGAATGCAC
CGCCTACTCTCTAGCTCAATTCGTTGTTGGGAGAGTGATTCTGGGTTTCG
GTGTTGGCATGCTCAGTGCGACTGTTCCTGTCTGGCAATCCGAGTGCGCG
CCTGCTGCTCAGCGAGGACGGAACGTGGTGTTGACAGGCATGTTCATCGC
CTTTGGTTTCGCTTTGACACAATGGGTGAACTTCGGTTTCTACCACATGG
AGAACTCGCCTGCCTCGTGGAGGGCATCACTTGCCATCCCGGCCTTGTTT
TCATTCATAATCATGGGCAGCATTTTCTTCCTCCCAGAGTCGCCGCGTTG
GCTCGTCATGAAGAACAAATCAGACGTGGCACAGTTTACTTTGGCATCTC
TGAGGGGCAAAGAGGTAGACTCGCTGGAGGTTGTGGCGGAGCTAAGAGCC
TACGAGCTTTCTCTGGAGGAATCCTCGAACAACTCACTTAGGCTCCGAGA
CATCTTCAGTATGGGAGAGGAGAAGCTCCTATACAGGTTCATCCTATGTG
TCACCCTCCAATTCTTCCAGCAGATGACTGGTGGAACTCTGATCTCGGTC
TACATTCCTCTTATCTTTCAAACAGATCTTGGACTCGGTGCCAGTCTGTC
GAAAATCTTGGCAGCATGCGCATTGACTTGGAAGTTCCTGTGCTGCTTTG
TGGGATTTGCCATCATTGACCGCATGGGACGACGCACAGCATTTATGGTC
AGTGGCGGTGGTATGGGCATGTGCATGTTGGCATTGGCGGTCTCCAATTC
CTTCTCCAATAACCATACCGCATCTATTATTTCCGCCCTTTTCATTTTCA
TTTACAACTTCTTCCTTCCGATCGGCTTCTTGGGAGCCAACTTCCTTTAC
CCAGCCGAGGTGGCGCCTGCCCGTCTTCGTGTCGCTATGCAAGCGATCTC
AATTGCCAACCAATGGCTATGGATGTTTGTCGTCGCTATGATCACTCCCG
TCGCTATCGACAACATCGGCTATCGCTACTACATTGTTTACGCCATCATC
GGTGGCATCATCCCTCCCATCATCTATCTGTTCTACCCAGAAACCAAGGG
CCGGTCCCTAGAAGAAGTTGACGAGATCTTCCGTGACGCTCCCACAATCT
TCGCTGCGGTGTCGATGTCGAAGCATAAGCCGATGGGAGATAGGGCCATG
GAGCGTGTCATGGAAGAGAAGGCAACTGTGGAGGAAATAGAGTAAATGCA
GGGCCAAGCACTTCGTTATGCCCAGATCTTCTTAGTCGCTTGCCCCTCCT
TTATCCTTTTCGGTTACAATCAGTCCGGTGTCGGAGGACTCGATGACTTT
CCCTCCTGGGTGAGAGTTTTTCCAGAAATTGACACAGTCAACACTACTGG
AGCTCAGGAGTCTCACAATGCCACCGTTCAAGGAGCTGTGGTTGCGTCAT
ACACTATCGGAGCCCTCTTCGGGTCTCTGATTTGTACAATGATCGGTGAC
ATGCTTGGACGTCGCCGATCGATCTTTTCTGGAGCACTCATTGCATTGAT
TGGCCAAATCCTGGAATGCACCGCCTACTCTCTAGCTCAATTCGTTGTTG
GGAGAGTGATTCTGGGTTTCGGTGTTGGCATGCTCAGTGCGACTGTTCCT
GTCTGGCAATCCGAGTGCGCGCCTGCTGCTCAGCGAGGACGGAACGTGGT
GTTGACAGGCATGTTCATCGCCTTTGGTTTCGCTTTGACACAATGGGTGA
ACTTCGGTTTCTACCACATGGAGAACTCGCCTGCCTCGTGGAGGGCATCA
CTTGCCATCCCGGCCTTGTTTTCATTCATAATCATGGGCAGCATTTTCTT
CCTCCCAGAGTCGCCGCGTTGGCTCGTCATGAAGAACAAATCAGACGTGG
CACAGTTTACTTTGGCATCTCTGAGGGGCAAAGAGGTAGACTCGCTGGAG
GTTGTGGCGGAGCTAAGAGCCTACGAGCTTTCTCTGGAGGAATCCTCGAA
CAACTCACTTAGGCTCCGAGACATCTTCAGTATGGGAGAGGAGAAGCTCC
TATACAGGTTCATCCTATGTGTCACCCTCCAATTCTTCCAGCAGATGACT
GGTGGAACTCTGATCTCGGTCTACATTCCTCTTATCTTTCAAACAGATCT
TGGACTCGGTGCCAGTCTGTCGAAAATCTTGGCAGCATGCGCATTGACTT
GGAAGTTCCTGTGCTGCTTTGTGGGATTTGCCATCATTGACCGCATGGGA
CGACGCACAGCATTTATGGTCAGTGGCGGTGGTATGGGCATGTGCATGTT
GGCATTGGCGGTCTCCAATTCCTTCTCCAATAACCATACCGCATCTATTA
TTTCCGCCCTTTTCATTTTCATTTACAACTTCTTCCTTCCGATCGGCTTC
TTGGGAGCCAACTTCCTTTACCCAGCCGAGGTGGCGCCTGCCCGTCTTCG
TGTCGCTATGCAAGCGATCTCAATTGCCAACCAATGGCTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011124ATCC10864_011124Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011124-T1ATCC10864_011124-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011124-T1.cdsATCC10864_011124-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011124-T1.exon2ATCC10864_011124-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011124-T1.exon1ATCC10864_011124-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:126337..127916 -
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