You are here

Home

ATCC10864_011139-T1, ATCC10864_011139-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011139-T1
Unique NameATCC10864_011139-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:172213..173179+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011139-T1 ID=ATCC10864_011139-T1|Name=ATCC10864_011139-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=967bp|location=Sequence derived from alignment at MCQH01000255:172213..173179+ (Aspergillus niger ATCC 10864)
ATGCCCCACAGCTCCCGCAAAAAACACCCCAACAACTCCGCGCAAGCGCA
AAAACGACTCCAAATCACCGACGCTACCGGCTGGACGCATGTCACCACCG
GCGGCAAAGCGCGCCGCTGTGTGCGCACCACCACCAACACCACCAACCAA
CATTCCCAATCACCACAAGAAGAATCAATCTTCTTCCACCCCGCCGAAGC
CCCTCCCACCACTACTCTCGAATCCCTTCAATCGCAATTCACCCAGATCC
AACGAACGTGGAAAGATTCATCCGCCTGCGATGTAGTGGGGAAGACTTTA
CGCAATATCCTTCCGCATACAACAGATACAAATACGAATTCACCGATAGA
GATCAATAATGATAATAATAAGAATAATGATGATAATGGAATAGATTCCA
TAATCTGCATCGGTCTCGGCAGTCCGAGCGGGTTCCTCCGCGGAGGATGG
GTCGATCGGCGACTAGTCTCGCTGTATCAGTTGGCTGCGTTGGTGGATGT
TATGGCTTCTATCTCTTCTTCTTTTTCTTCCTGTAAGTATTGGCCCTCCT
CCTCCTCCTCCTCCTCCTCCTATGATCTCTCTAATTCACTTCAACTAAAC
CACCCACTCCAATTCAATAGCTCCAACAATAAAAACCTACGCTCAAGACC
CCGTCTTCAACACTCTCGACACATCCCTCCTCTCTAGCCTCGATATCACC
GTCCTTGAGTCCCCGCATGCCTTCGAAAAAGTCACGTCCCGTACATTCCT
CTTCTGTCCTGGTGCGGAGCGCACACATCTGGAGCAAATGCTGGCGCTGG
ATCCGGCGTTTCTGTTTGGGGGTCCGTTGGAGGATGTTGAGTCCGAGGTG
GTGAGTGCGTTTGTGAAGAGGAGGGGGTCGGTAAGGGTGCCGCTGTTTGA
GGCGCAGGAGCATGCGTTTTGGAATATGCGGGTTTATTATCCGTTGGAGA
GGGAGGGTGAGGTATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000255:172213..173179+

>ATCC10864_011139-T1 ID=ATCC10864_011139-T1|Name=ATCC10864_011139-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1758bp|location=Sequence derived from alignment at MCQH01000255:172213..173179+ (Aspergillus niger ATCC 10864)
ATGCCCCACAGCTCCCGCAAAAAACACCCCAACAACTCCGCGCAAGCGCA
AAAACGACTCCAAATCACCGACGCTACCGGCTGGACGCATGTCACCACCG
GCGGCAAAGCGCGCCGCTGTGTGCGCACCACCACCAACACCACCAACCAA
CATTCCCAATCACCACAAGAAGAATCAATCTTCTTCCACCCCGCCGAAGC
CCCTCCCACCACTACTCTCGAATCCCTTCAATCGCAATTCACCCAGATCC
AACGAACGTGGAAAGATTCATCCGCCTGCGATGTAGTGGGGAAGACTTTA
CGCAATATCCTTCCGCATACAACAGATACAAATACGAATTCACCGATAGA
GATCAATAATGATAATAATAAGAATAATGATGATAATGGAATAGATTCCA
TAATCTGCATCGGTCTCGGCAGTCCGAGCGGGTTCCTCCGCGGAGGATGG
GTCGATCGGCGACTAGTCTCGCTGTATCAGTTGGCTGCGTTGGTGGATGT
TATGGCTTCTATCTCTTCTTCTTTTTCTTCCTCTCCAACAATAAAAACCT
ACGCTCAAGACCCCGTCTTCAACACTCTCGACACATCCCTCCTCTCTAGC
CTCGATATCACCGTCCTTGAGTCCCCGCATGCCTTCGAAAAAGTCACGTC
CCGTACATTCCTCTTCTGTCCTGGTGCGGAGCGCACACATCTGGAGCAAA
TGCTGGCGCTGGATCCGGCGTTTCTGTTTGGGGGTCCGTTGGAGGATGTT
GAGTCCGAGGTGGTGAGTGCGTTTGTGAAGAGGAGGGGGTCGGTAAGGGT
GCCGCTGTTTGAGGCGCAGGAGCATGCGTTTTGGAATATGCGGGTTTATT
ATCCGTTGGAGAGGGAGGGTGAGGTATAGATGCCCCACAGCTCCCGCAAA
AAACACCCCAACAACTCCGCGCAAGCGCAAAAACGACTCCAAATCACCGA
CGCTACCGGCTGGACGCATGTCACCACCGGCGGCAAAGCGCGCCGCTGTG
TGCGCACCACCACCAACACCACCAACCAACATTCCCAATCACCACAAGAA
GAATCAATCTTCTTCCACCCCGCCGAAGCCCCTCCCACCACTACTCTCGA
ATCCCTTCAATCGCAATTCACCCAGATCCAACGAACGTGGAAAGATTCAT
CCGCCTGCGATGTAGTGGGGAAGACTTTACGCAATATCCTTCCGCATACA
ACAGATACAAATACGAATTCACCGATAGAGATCAATAATGATAATAATAA
GAATAATGATGATAATGGAATAGATTCCATAATCTGCATCGGTCTCGGCA
GTCCGAGCGGGTTCCTCCGCGGAGGATGGGTCGATCGGCGACTAGTCTCG
CTGTATCAGTTGGCTGCGTTGGTGGATGTTATGGCTTCTATCTCTTCTTC
TTTTTCTTCCTCTCCAACAATAAAAACCTACGCTCAAGACCCCGTCTTCA
ACACTCTCGACACATCCCTCCTCTCTAGCCTCGATATCACCGTCCTTGAG
TCCCCGCATGCCTTCGAAAAAGTCACGTCCCGTACATTCCTCTTCTGTCC
TGGTGCGGAGCGCACACATCTGGAGCAAATGCTGGCGCTGGATCCGGCGT
TTCTGTTTGGGGGTCCGTTGGAGGATGTTGAGTCCGAGGTGGTGAGTGCG
TTTGTGAAGAGGAGGGGGTCGGTAAGGGTGCCGCTGTTTGAGGCGCAGGA
GCATGCGTTTTGGAATATGCGGGTTTATTATCCGTTGGAGAGGGAGGGTG
AGGTATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011139ATCC10864_011139Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011139-T1.exon1ATCC10864_011139-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011139-T1.exon2ATCC10864_011139-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011139-T1.cdsATCC10864_011139-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011139-T1ATCC10864_011139-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07985
InterProIPR012942
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:172213..173179 +
Powered by Drupal